| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b0426 | yajQ | orf, hypothetical protein (VIMSS) | 1.0 | b2475 | ypfJ | hypothetical protein (NCBI) | 0.27 | 16 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_07020 | yajQ | nucleotide binding protein YajQ | 1.00 | HEPCGN_21105 | ypfJ | Uncharacterized protein YpfJ | low | > 85 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_19575 | yajQ | nucleotide binding protein YajQ | 1.00 | KEDOAH_06285 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_01340 | yajQ | nucleotide binding protein YajQ | 1.00 | NOLOHH_13605 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia coli BL21 | 1.00 | ECD_00374 | | phage Phi6 host factor, ATP/GTP binding protein | 1.00 | ECD_02367 | | putative neutral zinc metallopeptidase | low | > 60 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS02565 | | nucleotide binding protein YajQ | 1.00 | ECOLIN_RS14125 | | neutral zinc metallopeptidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_03250 | | hypothetical protein | 1.00 | OHPLBJKB_01255 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_06445 | yajQ | nucleotide binding protein YajQ | 1.00 | NIAGMN_19705 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia fergusonii Becca | 1.00 | EFB2_03631 | | hypothetical protein | 1.00 | EFB2_01412 | | hypothetical protein | low | > 86 |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_08390 | yajQ | nucleotide binding protein YajQ | 1.00 | OKFHMN_21935 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_27615 | yajQ | nucleotide binding protein YajQ | 1.00 | MCAODC_12465 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_22755 | yajQ | nucleotide binding protein YajQ | 1.00 | BNILDI_12415 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_12045 | yajQ | nucleotide binding protein YajQ | 1.00 | JDDGAC_25880 | ypfJ | Uncharacterized protein YpfJ | — | — |
| Klebsiella michiganensis M5al | 0.92 | BWI76_RS06410 | | YajQ family cyclic di-GMP-binding protein | 0.80 | BWI76_RS20890 | | neutral zinc metallopeptidase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_2545 | | Uncharacterized protein conserved in bacteria | 0.89 | EX28DRAFT_0185 | | Predicted metalloprotease | low | > 76 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_01017 | | hypothetical protein | 0.89 | MPMX20_03337 | | hypothetical protein | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.91 | GFF4337 | | FIG001943: hypothetical protein YajQ | 0.91 | GFF2183 | | YpfJ protein, zinc metalloprotease superfamily | low | > 78 |
| Rahnella sp. WP5 | 0.79 | EX31_RS22185 | | YajQ family cyclic di-GMP-binding protein | 0.66 | EX31_RS22755 | | hypothetical protein | low | > 89 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_04955 | | YajQ family cyclic di-GMP-binding protein | 0.71 | IAI46_18765 | | neutral zinc metallopeptidase | low | > 86 |
| Pantoea sp. MT58 | 0.78 | IAI47_14710 | | YajQ family cyclic di-GMP-binding protein | 0.79 | IAI47_05280 | | neutral zinc metallopeptidase | low | > 76 |
| Shewanella sp. ANA-3 | 0.65 | Shewana3_0782 | | putative nucleotide-binding protein (RefSeq) | 0.44 | Shewana3_0462 | | protein of unknown function, zinc metallopeptidase putative (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.63 | SO3815 | | conserved hypothetical protein (NCBI ptt file) | 0.44 | SO0463 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.47 | AO356_17960 | | nucleotide-binding protein | 0.46 | AO356_15565 | | metallopeptidase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.47 | Pf6N2E2_5522 | | FIG001943: hypothetical protein YajQ | 0.47 | Pf6N2E2_5054 | | YpfJ protein, zinc metalloprotease superfamily | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.47 | Psest_1142 | | Uncharacterized protein conserved in bacteria | 0.45 | Psest_3497 | | Predicted metalloprotease | low | > 67 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_08210 | | UPF0234 protein Yitk | 0.45 | OH686_16025 | | YpfJ protein, zinc metalloprotease superfamily | low | > 80 |
| Rhodanobacter sp. FW510-T8 | 0.46 | OKGIIK_03500 | yajQ | YajQ family cyclic di-GMP-binding protein | 0.40 | OKGIIK_09720 | ypfJ | neutral zinc metallopeptidase | low | > 52 |
| Acinetobacter radioresistens SK82 | 0.46 | MPMX26_02644 | | hypothetical protein | 0.46 | MPMX26_00758 | | hypothetical protein | low | > 36 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_1840 | | FIG001943: hypothetical protein YajQ | 0.44 | PfGW456L13_1416 | | YpfJ protein, zinc metalloprotease superfamily | — | — |
| Pseudomonas putida KT2440 | 0.46 | PP_1352 | | UPF0234 protein PP_1352 | 0.43 | PP_4657 | | zinc metalloprotease | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_03640 | | nucleotide-binding protein | 0.45 | AO353_06230 | | metallopeptidase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_22510 | | nucleotide-binding protein | 0.45 | PS417_24465 | | metallopeptidase | — | — |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.45 | PFLU_RS26390 | | metallopeptidase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.45 | PFLU_RS26390 | | metallopeptidase | low | > 109 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_03425 | | hypothetical protein | 0.47 | PFR28_03818 | | hypothetical protein | low | > 88 |
| Rhodanobacter denitrificans MT42 | 0.46 | LRK55_RS14390 | | YajQ family cyclic di-GMP-binding protein | 0.41 | LRK55_RS02425 | | neutral zinc metallopeptidase | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS00410 | | YajQ family cyclic di-GMP-binding protein | 0.42 | ABZR86_RS09025 | | neutral zinc metallopeptidase | low | > 74 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_4087 | | Protein of unknown function DUF520 | 0.45 | Psyr_4289 | | Protein of unknown function Zinc binding 2 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_650 | | FIG001943: hypothetical protein YajQ | 0.45 | Pf1N1B4_2743 | | YpfJ protein, zinc metalloprotease superfamily | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_4087 | | Protein of unknown function DUF520 | 0.45 | Psyr_4289 | | Protein of unknown function Zinc binding 2 | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS14675 | | YajQ family cyclic di-GMP-binding protein | 0.41 | LRK54_RS02670 | | zinc metallopeptidase | low | > 59 |
| Variovorax sp. SCN45 | 0.44 | GFF3099 | | UPF0234 protein Yitk | 0.43 | GFF1916 | | YpfJ protein, zinc metalloprotease superfamily | — | — |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS21685 | | YajQ family cyclic di-GMP-binding protein | 0.45 | ABID97_RS22035 | | neutral zinc metallopeptidase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF292 | | FIG001943: hypothetical protein YajQ | 0.48 | GFF221 | | YpfJ protein, zinc metalloprotease superfamily | — | — |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_2620 | | FIG001943: hypothetical protein YajQ | 0.50 | Ac3H11_1123 | | YpfJ protein, zinc metalloprotease superfamily | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS04840 | | YajQ family cyclic di-GMP-binding protein | 0.43 | ABZR88_RS00010 | | neutral zinc metallopeptidase | low | > 71 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS12780 | | nucleotide-binding protein | 0.46 | RS_RS12550 | | flagellar biosynthesis protein FlgM | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.41 | RPSI07_RS12140 | | YajQ family cyclic di-GMP-binding protein | 0.46 | RPSI07_RS12360 | | flagellin biosynthesis protein FlgM | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS00820 | | YajQ family cyclic di-GMP-binding protein | 0.47 | ABZR87_RS00550 | | neutral zinc metallopeptidase | low | > 80 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS08465 | | YajQ family cyclic di-GMP-binding protein | 0.46 | UW163_RS08695 | | flagellar biosynthesis protein FlgM | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS05160 | | YajQ family cyclic di-GMP-binding protein | 0.46 | RALBFv3_RS04930 | | flagellar biosynthesis protein FlgM | low | > 76 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS21810 | | nucleotide-binding protein | 0.51 | AZOBR_RS01370 | | metallopeptidase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_04413 | | hypothetical protein | 0.46 | MPMX19_06710 | | hypothetical protein | low | > 112 |
| Cupriavidus basilensis FW507-4G11 | 0.39 | RR42_RS17155 | | nucleotide-binding protein | 0.45 | RR42_RS19875 | | metalloprotease | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_04122 | | hypothetical protein | 0.44 | H281DRAFT_01469 | | hypothetical protein | — | — |
| Mycobacterium tuberculosis H37Rv | 0.38 | Rv0566c | | Conserved protein | 0.26 | Rv2575 | | Possible conserved membrane glycine rich protein | low | > 58 |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_003357 | | uncharacterized protein YajQ (UPF0234 family) | 0.44 | ABIE53_000958 | | putative metalloprotease | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.37 | CA265_RS09840 | | YajQ family cyclic di-GMP-binding protein | 0.44 | CA265_RS21615 | | metalloprotease | low | > 88 |
Not shown: 23 genomes with orthologs for b0426 only; 7 genomes with orthologs for b2475 only