Homologs of SMc01506 from Sinorhizobium meliloti 1021

RNA polymerase sigma factor
SEED: macromolecule metabolism; macromolecule synthesis, modification; rna synthesis, modification , dna transcription
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 83 99
o Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 71 95
o Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 61 90
o Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 57 96
o Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 57 83
o Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 57 83
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 48 99
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 51 85
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 51 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 49 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 52 87
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 48 85
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 48 85
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 42 83
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 41 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 40 84
o Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 42 80
  Rhizobium sp. OAE497 ABIE40_RS21790 sigma-70 family RNA polymerase sigma factor cofit 44 86
  Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 39 84
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 39 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 84
  Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 38 84
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 42 82
  Agrobacterium fabrum C58 Atu5490 ECF family RNA polymerase sigma factor insig. 40 84
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 38 92
o Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 40 86
  Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 40 86
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 39 76
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 38 80
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 39 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 84
  Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 35 92
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 38 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 38 83
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 37 91
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 39 79
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 36 92
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 37 83
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 35 83
  Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 39 79
o Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 35 84
  Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 37 80
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 34 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10915 RNA polymerase subunit sigma strong 34 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 40 81
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 35 84
  Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 35 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 77
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 34 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 35 84
  Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 35 81
o Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 insig. 34 84
  Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 35 81
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 32 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1476 RNA polymerase sigma factor, sigma-70 family insig. 30 87
  Agrobacterium fabrum C58 Atu5283 ECF family RNA polymerase sigma factor no data 43 60
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 35 81
  Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 35 81
  Bacteroides thetaiotaomicron VPI-5482 BT2569 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 34 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 33 83
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 38 83
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 38 76
  Phocaeicola dorei CL03T12C01 ABI39_RS17450 RNA polymerase sigma factor strong 35 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03770 RNA polymerase sigma factor strong 35 82
  Bacteroides ovatus ATCC 8483 BACOVA_01848 Sigma-70 region 2 strong 34 84
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 33 84
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 32 84
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 33 84
  Bacteroides ovatus ATCC 8483 BACOVA_03979 Sigma-70 region 2 strong 32 84
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 30 86
  Bifidobacterium breve UCC2003 BBR_RS16820 RNA polymerase sigma factor RpoE strong 30 87
  Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 36 82
  Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 36 81
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 33 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1191 RNA polymerase sigma factor, sigma-70 family insig. 35 73
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 36 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 32 82
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 31 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 29 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 32 78
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 86
  Bacteroides thetaiotaomicron VPI-5482 BT1197 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 31 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 32 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16675 hypothetical protein insig. 33 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 34 83
  Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 33 82
  Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 35 78
  Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 35 82
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 34 88
  Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 33 83
  Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 31 87
  Bacteroides thetaiotaomicron VPI-5482 BT2383 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 86
  Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 35 80
  Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 35 80
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 33 77
  Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 38 82
  Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 33 84
  Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 31 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15765 RNA polymerase sigma factor strong 29 84