| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sinorhizobium meliloti 1021 | SMa0168 | | hypothetical protein | insig. | 100 | 100 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS04625 | | class I SAM-dependent methyltransferase | insig. | 33 | 46 |
| | Serratia liquefaciens MT49 | IAI46_00185 | | class I SAM-dependent methyltransferase | insig. | 37 | 47 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13315 | | class I SAM-dependent methyltransferase | insig. | 35 | 53 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13315 | | class I SAM-dependent methyltransferase | insig. | 35 | 53 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32430 | | SAM-dependent methyltransferase | insig. | 35 | 50 |
| | Pseudomonas simiae WCS417 | PS417_12620 | | SAM-dependent methyltransferase | insig. | 35 | 53 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS15735 | | class I SAM-dependent methyltransferase | insig. | 34 | 49 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02776 | | putative methyltransferase | cofit | 33 | 53 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22810 | | class I SAM-dependent methyltransferase | insig. | 34 | 51 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22635 | | SAM-dependent methyltransferase | insig. | 34 | 51 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS07145 | | class I SAM-dependent methyltransferase | cofit | 35 | 47 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36530 | | class I SAM-dependent methyltransferase | sig. | 34 | 51 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS15980 | | class I SAM-dependent methyltransferase | insig. | 32 | 49 |
| | Pseudomonas orientalis W4I3 | QF045_RS17260 | | class I SAM-dependent methyltransferase | insig. | 33 | 53 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07445 | | class I SAM-dependent methyltransferase | insig. | 32 | 50 |
| o | Mycobacterium tuberculosis H37Rv | Rv3342 | | Possible methyltransferase (methylase) | sig. | 29 | 88 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_20690 | | SAM-dependent methyltransferase | insig. | 34 | 49 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20330 | | class I SAM-dependent methyltransferase | no data | 31 | 51 |
| | Acinetobacter baumannii LAC-4 | RR41_RS01835 | | class I SAM-dependent methyltransferase | insig. | 27 | 48 |
| | Acinetobacter radioresistens SK82 | MPMX26_02763 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 35 | 46 |
| | Azospirillum sp. SherDot2 | MPMX19_03826 | | putative methyltransferase | no data | 35 | 47 |
| | Rhizobium sp. OAE497 | ABIE40_RS05105 | | class I SAM-dependent methyltransferase | insig. | 34 | 46 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3031.1 | | Methyltransferase (EC 2.1.1.-) | insig. | 30 | 45 |
| | Lysobacter sp. OAE881 | ABIE51_RS04635 | | class I SAM-dependent methyltransferase | insig. | 32 | 53 |
| | Pantoea sp. MT58 | IAI47_13520 | | malonyl-ACP O-methyltransferase BioC | insig. | 30 | 59 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0017 | | Methyltransferase type 11 (RefSeq) | insig. | 32 | 47 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS03780 | | malonyl-ACP O-methyltransferase BioC | cofit | 29 | 59 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25575 | | phosphatidylethanolamine N-methyltransferase | sig. | 30 | 37 |
| | Methanococcus maripaludis JJ | MMJJ_RS08285 | | class I SAM-dependent methyltransferase | insig. | 26 | 42 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS06335 | | class I SAM-dependent methyltransferase | sig. | 31 | 51 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05720 | | class I SAM-dependent methyltransferase | strong | 31 | 51 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS46460 | | class I SAM-dependent methyltransferase | strong | 31 | 51 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1438 | | Methyltransferase (EC 2.1.1.-) | insig. | 27 | 57 |
| | Methanococcus maripaludis S2 | MMP_RS06075 | | class I SAM-dependent methyltransferase | sig. | 25 | 42 |
| | Variovorax sp. OAS795 | ABID97_RS16745 | | class I SAM-dependent methyltransferase | cofit | 32 | 39 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20630 | | SAM-dependent methyltransferase | cofit | 30 | 56 |
| | Variovorax sp. SCN45 | GFF304 | | Ubiquinone/menaquinone biosynthesis methyltransferase family protein | insig. | 33 | 39 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1984 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 27 | 49 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21750 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 26 | 91 |
| | Pseudomonas sp. RS175 | PFR28_03907 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 31 | 42 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS02045 | | class I SAM-dependent methyltransferase | insig. | 29 | 42 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS03900 | | class I SAM-dependent methyltransferase | cofit | 34 | 34 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01330 | | class I SAM-dependent methyltransferase | sig. | 30 | 59 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 30 | 59 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34225 | | class I SAM-dependent methyltransferase | sig. | 30 | 59 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 29 | 53 |
| | Azospirillum sp. SherDot2 | MPMX19_05980 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 28 | 37 |
| | Mycobacterium tuberculosis H37Rv | Rv0089 | | Possible methyltransferase/methylase | insig. | 32 | 36 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS03815 | | class I SAM-dependent methyltransferase | insig. | 32 | 49 |
| | Pseudomonas segetis P6 | ACVTMO_RS15220 | | class I SAM-dependent methyltransferase | insig. | 28 | 54 |
| | Pseudomonas stutzeri RCH2 | Psest_0414 | | biotin biosynthesis protein BioC | strong | 32 | 36 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29515 | | hypothetical protein | insig. | 29 | 51 |
| | Sinorhizobium meliloti 1021 | SMc01426 | | hypothetical protein | insig. | 26 | 61 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13455 | | SAM-dependent methyltransferase | sig. | 32 | 49 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 30 | 55 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20000 | | class I SAM-dependent methyltransferase | insig. | 29 | 46 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4042 | | SAM-dependent methyltransferase YafE (UbiE paralog) | insig. | 27 | 36 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 29 | 39 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 28 | 41 |
| | Serratia liquefaciens MT49 | IAI46_04605 | | class I SAM-dependent methyltransferase | insig. | 40 | 22 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34850 | | class I SAM-dependent methyltransferase | insig. | 32 | 49 |
| | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 30 | 55 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 46 | 18 |
| | Pseudomonas sp. DMC3 | GFF4661 | | hypothetical protein | cofit | 29 | 57 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS13475 | | class I SAM-dependent methyltransferase | insig. | 28 | 46 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48770 | | class I SAM-dependent methyltransferase | insig. | 28 | 46 |
| | Rhodopseudomonas palustris CGA009 | TX73_020340 | | class I SAM-dependent methyltransferase | insig. | 26 | 51 |
| | Agrobacterium fabrum C58 | Atu1041 | | methyltransferase | insig. | 26 | 41 |
| | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 32 | 39 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 34 | 34 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15110 | | methyltransferase | insig. | 32 | 34 |
| | Lysobacter sp. OAE881 | ABIE51_RS02505 | | cyclopropane-fatty-acyl-phospholipid synthase family protein | insig. | 31 | 44 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1052.1 | | hypothetical protein | insig. | 29 | 51 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 30 | 55 |
| | Pseudomonas sp. RS175 | PFR28_02822 | | putative methyltransferase YcgJ | insig. | 29 | 55 |