| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Mycobacterium tuberculosis H37Rv | Rv1498c | | Probable methyltransferase | insig. | 100 | 100 |
| | Caulobacter crescentus NA1000 | CCNA_01978 | | methyltransferase | sig. | 43 | 99 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01978 | | methyltransferase | cofit | 43 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04156 | | hypothetical protein | insig. | 39 | 100 |
| | Sinorhizobium meliloti 1021 | SM_b21312 | | methyltransferase | insig. | 40 | 99 |
| | Pseudomonas sp. S08-1 | OH686_22795 | | hypothetical protein | insig. | 27 | 85 |
| | Ralstonia solanacearum GMI1000 | RS_RS09105 | | methyltransferase domain-containing protein | insig. | 39 | 59 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 31 | 59 |
| | Azospirillum sp. SherDot2 | MPMX19_04629 | | D-inositol-3-phosphate glycosyltransferase | insig. | 32 | 57 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29610 | | phosphatidylethanolamine N-methyltransferase PmtA | strong | 29 | 66 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10075 | | methyltransferase domain-containing protein | insig. | 30 | 55 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2034 | | Methyltransferase | insig. | 32 | 56 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05385 | | class I SAM-dependent methyltransferase | cofit | 30 | 58 |
| | Marinobacter adhaerens HP15 | HP15_2860 | | methyltransferase | cofit | 32 | 56 |
| | Azospirillum sp. SherDot2 | MPMX19_01171 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 30 | 60 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 34 | 56 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1099 | ubiE | ubiquinone/menaquinone biosynthesis methyltransferase | strong | 30 | 56 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4022 | | Methyltransferase type 11 | no data | 30 | 56 |
| | Agrobacterium fabrum C58 | Atu1625 | | methyltransferase | insig. | 32 | 56 |
| | Pseudomonas sp. RS175 | PFR28_00315 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 31 | 56 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 30 | 58 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 30 | 58 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3379.1 | | Transcriptional regulator, ArsR family / Methyltransferase fusion | sig. | 29 | 57 |
| | Pseudomonas orientalis W4I3 | QF045_RS25280 | | class I SAM-dependent methyltransferase | insig. | 31 | 56 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00644 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 30 | 69 |
| | Mycobacterium tuberculosis H37Rv | Rv1523 | | Probable methyltransferase | insig. | 32 | 58 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 30 | 60 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 29 | 55 |
| | Sphingobium sp. HT1-2 | GFF77 | | Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79), plant type | cofit | 28 | 65 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS10405 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 59 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS10765 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 31 | 59 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14715 | | Biotin synthase | insig. | 30 | 58 |
| | Bosea sp. OAE506 | ABIE41_RS10850 | | class I SAM-dependent methyltransferase | no data | 28 | 60 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS12085 | | class I SAM-dependent methyltransferase | insig. | 26 | 55 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 31 | 57 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 28 | 59 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4023 | | PUTATIVE METHYLTRANSFERASE | insig. | 30 | 56 |
| | Azospirillum sp. SherDot2 | MPMX19_01375 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 30 | 56 |
| | Pectobacterium carotovorum WPP14 | HER17_RS08815 | | class I SAM-dependent methyltransferase | insig. | 26 | 61 |
| | Variovorax sp. SCN45 | GFF2542 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase (EC 2.1.1.201) | no data | 27 | 59 |
| | Mycobacterium tuberculosis H37Rv | Rv2952 | | Possible methyltransferase (methylase) | insig. | 34 | 55 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_08880 | | SAM-dependent methyltransferase | insig. | 32 | 57 |
| | Serratia liquefaciens MT49 | IAI46_04605 | | class I SAM-dependent methyltransferase | insig. | 31 | 57 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04054 | ubiE | SAM-dependent methyltransferase | insig. | 30 | 57 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12755 | | SAM-dependent methyltransferase | insig. | 27 | 57 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_0596 | | delta(24)-sterol C-methyltransferase | strong | 34 | 55 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_13680 | | SAM-dependent methyltransferase | insig. | 30 | 57 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_248 | | FIG025233: SAM-dependent methyltransferases | insig. | 30 | 69 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 29 | 61 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03890 | | class I SAM-dependent methyltransferase | insig. | 31 | 57 |
| | Collimonas humicola GW821-FHT01A05 | MPMX01_01384 | | putative methyltransferase YcgJ | insig. | 30 | 56 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS25655 | | class I SAM-dependent methyltransferase | insig. | 27 | 55 |
| | Ralstonia solanacearum GMI1000 | RS_RS17980 | | class I SAM-dependent methyltransferase | insig. | 33 | 58 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_01846 | | Class I SAM-dependent methyltransferase | sig. | 32 | 55 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 32 | 55 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_01883 | | Class I SAM-dependent methyltransferase | insig. | 32 | 55 |
| | Paraburkholderia graminis OAS925 | ABIE53_006338 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 32 | 56 |
| | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | cofit | 29 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS14385 | | methyltransferase domain-containing protein | no data | 30 | 61 |
| | Shewanella sp. ANA-3 | Shewana3_2463 | | methyltransferase type 11 (RefSeq) | insig. | 40 | 33 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15110 | | methyltransferase | insig. | 31 | 57 |
| | Variovorax sp. SCN45 | GFF3185 | | SAM-dependent methyltransferase | insig. | 27 | 73 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30135 | | SAM-dependent methyltransferase | insig. | 51 | 20 |
| | Azospirillum sp. SherDot2 | MPMX19_06641 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | cofit | 49 | 22 |
| | Bosea sp. OAE506 | ABIE41_RS02030 | | class I SAM-dependent methyltransferase | insig. | 32 | 55 |
| | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 30 | 55 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25575 | | phosphatidylethanolamine N-methyltransferase | sig. | 26 | 61 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3105 | | Methyltransferase domain | strong | 53 | 21 |
| | Klebsiella michiganensis M5al | BWI76_RS14735 | | type 11 methyltransferase | sig. | 30 | 56 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 29 | 58 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31990 | | hypothetical protein | insig. | 27 | 58 |
| | Mycobacterium tuberculosis H37Rv | Rv3038c | | Conserved protein | no data | 33 | 55 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03967 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 34 | 57 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12500 | | class I SAM-dependent methyltransferase | insig. | 30 | 55 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 28 | 69 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 28 | 69 |
| | Mycobacterium tuberculosis H37Rv | Rv0839 | | Conserved hypothetical protein | insig. | 33 | 55 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS01985 | | class I SAM-dependent methyltransferase | cofit | 29 | 55 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0427 | | conserved hypothetical protein | insig. | 28 | 69 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0427 | | conserved hypothetical protein | insig. | 28 | 69 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS03550 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 48 | 23 |
| | Dechlorosoma suillum PS | Dsui_1934 | | ubiquinone biosynthesis O-methyltransferase | no data | 26 | 61 |
| | Shewanella oneidensis MR-1 | SO1988 | | hypothetical methyltransferase (NCBI ptt file) | insig. | 38 | 33 |
| | Xanthobacter sp. DMC5 | GFF169 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 33 | 55 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS14070 | | class I SAM-dependent methyltransferase | insig. | 30 | 58 |
| | Pseudomonas orientalis W4I3 | QF045_RS05115 | | methyltransferase domain-containing protein | insig. | 28 | 69 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_10780 | | class I SAM-dependent methyltransferase | cofit | 32 | 56 |