Homologs of RR42_RS33450 from Cupriavidus basilensis FW507-4G11

alanine racemase
SEED: Type III PLP / low-specificity D-threonine aldolase

93 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS33450 alanine racemase insig. 100 100
o Variovorax sp. OAS795 ABID97_RS21530 DSD1 family PLP-dependent enzyme insig. 80 100
o Variovorax sp. SCN45 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) insig. 75 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS14275 DSD1 family PLP-dependent enzyme insig. 73 98
o Burkholderia phytofirmans PsJN BPHYT_RS28865 alanine racemase no data 71 98
o Herbaspirillum seropedicae SmR1 HSERO_RS05720 alanine racemase insig. 73 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05660 alanine racemase insig. 72 98
o Ralstonia solanacearum UW163 UW163_RS07965 alanine racemase insig. 72 98
o Ralstonia solanacearum GMI1000 RS_RS13550 DSD1 family PLP-dependent enzyme insig. 72 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS05880 DSD1 family PLP-dependent enzyme cofit 71 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03260 D-serine deaminase, pyridoxal phosphate-dependent insig. 71 98
o Pseudomonas fluorescens FW300-N2C3 AO356_26790 alanine racemase insig. 69 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS16410 DSD1 family PLP-dependent enzyme insig. 69 100
o Paraburkholderia graminis OAS925 ABIE53_002131 D-serine deaminase-like pyridoxal phosphate-dependent protein insig. 69 98
o Pseudomonas fluorescens SBW25 PFLU_RS19810 DSD1 family PLP-dependent enzyme insig. 67 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19810 DSD1 family PLP-dependent enzyme insig. 67 98
o Pseudomonas syringae pv. syringae B728a Psyr_3398 Alanine racemase, N-terminal insig. 67 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3398 Alanine racemase, N-terminal insig. 67 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03857 D-threo-3-hydroxyaspartate dehydratase cofit 67 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_354 Type III PLP / low-specificity D-threonine aldolase insig. 69 94
o Pseudomonas simiae WCS417 PS417_12910 alanine racemase insig. 67 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4210 Type III PLP / low-specificity D-threonine aldolase insig. 67 92
o Agrobacterium fabrum C58 Atu3948 hypothetical protein insig. 55 99
o Dickeya dadantii 3937 DDA3937_RS05270 DSD1 family PLP-dependent enzyme insig. 53 99
o Dinoroseobacter shibae DFL-12 Dshi_2109 alanine racemase domain protein (RefSeq) insig. 53 98
o Sphingobium sp. HT1-2 GFF2065 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) insig. 55 98
o Pectobacterium carotovorum WPP14 HER17_RS09810 DSD1 family PLP-dependent enzyme insig. 45 98
  Variovorax sp. SCN45 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) insig. 43 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18795 alanine racemase cofit 34 89
o Pantoea sp. MT58 IAI47_00550 alanine racemase insig. 35 91
o Rhizobium sp. OAE497 ABIE40_RS21390 D-TA family PLP-dependent enzyme insig. 32 94
  Agrobacterium fabrum C58 Atu3927 hypothetical protein insig. 32 94
o Sinorhizobium meliloti 1021 SM_b21134 amino acid processing enzyme, low specificity D-threonine aldolase insig. 29 96
  Azospirillum sp. SherDot2 MPMX19_04017 D-threonine aldolase insig. 30 90
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03130 alanine racemase strong 26 91
  Bosea sp. OAE506 ABIE41_RS21990 D-TA family PLP-dependent enzyme insig. 33 72
  Rhodospirillum rubrum S1H Rru_A0463 Alanine racemase-like (NCBI) insig. 30 93
o Fusobacterium nucleatum SB010 HUW76_07335 alanine racemase cofit 25 94
  Bosea sp. OAE506 ABIE41_RS05215 DSD1 family PLP-dependent enzyme insig. 31 74
  Variovorax sp. SCN45 GFF1049 low-specificity D-threonine aldolase insig. 31 73
  Dinoroseobacter shibae DFL-12 Dshi_0889 alanine racemase domain protein (RefSeq) insig. 27 96
  Variovorax sp. OAS795 ABID97_RS14455 DSD1 family PLP-dependent enzyme insig. 33 73
  Caulobacter crescentus NA1000 CCNA_03204 alanine racemase cofit 28 82
  Caulobacter crescentus NA1000 Δfur CCNA_03204 alanine racemase cofit 28 82
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2475 Predicted amino acid aldolase or racemase insig. 23 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1662 low-specificity D-threonine aldolase insig. 29 92
  Cupriavidus basilensis FW507-4G11 RR42_RS28440 alanine racemase insig. 30 90
  Variovorax sp. OAS795 ABID97_RS22865 amino acid deaminase insig. 27 93
  Variovorax sp. SCN45 GFF6714 Putative cryptic D-serine deaminase (EC 4.3.1.18) insig. 26 93
  Klebsiella pneumoniae MKP103 KDGMDA_12155 amino acid deaminase insig. 32 45
  Ralstonia sp. UNC404CL21Col ABZR87_RS19115 amino acid deaminase insig. 30 43
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12625 amino acid deaminase insig. 30 46
  Ralstonia solanacearum UW163 UW163_RS20945 amino acid deaminase insig. 28 65
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18185 amino acid deaminase insig. 29 43
  Ralstonia solanacearum PSI07 RPSI07_RS05450 amino acid deaminase insig. 28 65
  Serratia liquefaciens MT49 IAI46_02295 amino acid deaminase insig. 30 42
  Ralstonia solanacearum GMI1000 RS_RS22850 amino acid deaminase insig. 30 43
  Cupriavidus basilensis FW507-4G11 RR42_RS28855 amino acid deaminase insig. 30 36
  Pseudomonas sp. SVBP6 COO64_RS27380 hypothetical protein insig. 55 14
  Paraburkholderia sabiae LMG 24235 QEN71_RS01950 amino acid deaminase insig. 29 42
  Acidovorax sp. GW101-3H11 Ac3H11_1814 low-specificity D-threonine aldolase insig. 28 91
  Paraburkholderia graminis OAS925 ABIE53_000755 D-serine dehydratase sig. 29 42
  Klebsiella michiganensis M5al BWI76_RS03885 hypothetical protein insig. 30 45
  Pseudomonas syringae pv. syringae B728a Psyr_2509 conserved hypothetical protein insig. 29 45
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2509 conserved hypothetical protein insig. 29 45
  Burkholderia phytofirmans PsJN BPHYT_RS03115 amino acid deaminase insig. 29 42
  Pseudomonas fluorescens FW300-N2C3 AO356_00450 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 30 39
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01893 D-serine dehydratase insig. 30 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2047 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 30 39
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2867 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) sig. 31 39
  Pseudomonas simiae WCS417 PS417_12125 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 30 41
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03371 D-threonine aldolase cofit 29 38
  Pseudomonas fluorescens FW300-N2E3 AO353_21740 D-glucosaminate dehydratase (EC 4.3.1.9) (from data) strong 28 42
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2091 Predicted amino acid aldolase or racemase insig. 22 93
  Pseudomonas sp. RS175 PFR28_01389 D-threonine aldolase strong 28 39
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5639 D-serine deaminase (EC 4.3.1.18) insig. 28 40
  Pseudomonas sp. DMC3 GFF3665 D-threonine aldolase insig. 29 39
  Rahnella sp. WP5 EX31_RS07970 amino acid deaminase insig. 26 36
  Mycobacterium tuberculosis H37Rv Rv1413 Conserved hypothetical protein insig. 34 41
  Pseudomonas fluorescens SBW25 PFLU_RS12815 amino acid deaminase cofit 28 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12815 amino acid deaminase strong 28 38
  Agrobacterium fabrum C58 Atu5233 D-serine deaminase no data 31 47
  Herbaspirillum seropedicae SmR1 HSERO_RS08720 amino acid deaminase insig. 25 37
  Azospirillum sp. SherDot2 MPMX19_04489 D-threonine aldolase insig. 31 47
  Acidovorax sp. GW101-3H11 Ac3H11_693 D-serine deaminase (EC 4.3.1.18) insig. 27 43
  Azospirillum brasilense Sp245 AZOBR_RS26420 amino acid deaminase insig. 26 90
  Dickeya dianthicola ME23 DZA65_RS18650 alanine racemase strong 32 37
  Dickeya dianthicola 67-19 HGI48_RS17565 alanine racemase strong 31 37
  Klebsiella pneumoniae MKP103 KDGMDA_10375 alanine racemase insig. 30 37
  Enterobacter sp. TBS_079 MPMX20_00269 Alanine racemase, biosynthetic insig. 26 37
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1422 Alanine racemase (EC 5.1.1.1) insig. 30 37
  Pseudomonas sp. S08-1 OH686_13695 alanine racemase insig. 28 46
  Enterobacter asburiae PDN3 EX28DRAFT_4259 alanine racemase insig. 26 37