Homologs of Pf1N1B4_3399 from Pseudomonas fluorescens FW300-N1B4

RNA polymerase sigma-70 factor, ECF subfamily
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

73 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3399 RNA polymerase sigma-70 factor, ECF subfamily insig. 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_03200 RNA polymerase subunit sigma-24 insig. 87 100
o Pseudomonas sp. RS175 PFR28_00603 hypothetical protein insig. 89 100
o Pseudomonas fluorescens FW300-N2C3 AO356_05020 RNA polymerase subunit sigma-24 insig. 89 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2854 RNA polymerase sigma-70 factor, ECF subfamily insig. 89 100
o Pseudomonas fluorescens SBW25 PFLU_RS23540 RNA polymerase sigma factor insig. 81 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS23540 RNA polymerase sigma factor insig. 81 98
o Pseudomonas simiae WCS417 PS417_21945 RNA polymerase subunit sigma-24 insig. 83 98
o Pseudomonas putida KT2440 PP_4553 RNA polymerase sigma-70 factor, ECF subfamily insig. 73 99
o Pseudomonas stutzeri RCH2 Psest_4133 RNA polymerase sigma factor, sigma-70 family sig. 70 100
o Pseudomonas sp. S08-1 OH686_16765 RNA polymerase ECF-type sigma factor cofit 70 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1935 RNA polymerase sigma-70 factor, ECF subfamily insig. 94 65
o Rhizobium sp. OAE497 ABIE40_RS05880 RNA polymerase sigma factor insig. 58 98
  Rhizobium sp. OAE497 ABIE40_RS18175 RNA polymerase sigma factor cofit 48 98
o Rhodanobacter denitrificans MT42 LRK55_RS01915 RNA polymerase sigma factor insig. 50 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF454 RNA polymerase sigma-70 factor, ECF subfamily insig. 47 99
o Cupriavidus basilensis FW507-4G11 RR42_RS26775 RNA polymerase subunit sigma-24 insig. 47 97
o Lysobacter sp. OAE881 ABIE51_RS14880 RNA polymerase sigma factor insig. 47 98
o Variovorax sp. SCN45 GFF3935 RNA polymerase ECF-type sigma factor insig. 46 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS19755 RNA polymerase sigma factor insig. 48 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3970 Predicted RNA polymerase sigma factor containing a TPR repeat domain insig. 46 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02165 RNA polymerase sigma factor insig. 50 97
o Rhodanobacter sp. FW510-T8 OKGIIK_09210 RNA polymerase subunit sigma-24 insig. 49 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS16225 RNA polymerase sigma factor insig. 47 96
o Acidovorax sp. GW101-3H11 Ac3H11_5010 RNA polymerase sigma-70 factor, ECF subfamily insig. 44 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS21130 RNA polymerase sigma factor insig. 50 97
  Rhizobium sp. OAE497 ABIE40_RS13680 RNA polymerase sigma factor insig. 45 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03679 RNA polymerase, sigma subunit, ECF family insig. 46 98
o Burkholderia phytofirmans PsJN BPHYT_RS35225 RNA polymerase subunit sigma-24 insig. 46 96
o Ralstonia solanacearum GMI1000 RS_RS20165 RNA polymerase subunit sigma-24 insig. 47 98
o Variovorax sp. OAS795 ABID97_RS08675 RNA polymerase sigma factor insig. 45 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4799.1 RNA polymerase sigma-70 factor, ECF subfamily insig. 44 99
o Paraburkholderia graminis OAS925 ABIE53_004579 RNA polymerase sigma factor (sigma-70 family) insig. 47 97
o Sinorhizobium meliloti 1021 SMc01150 hypothetical protein insig. 46 95
o Rhodopseudomonas palustris CGA009 TX73_005700 RNA polymerase sigma factor insig. 46 94
  Caulobacter crescentus NA1000 CCNA_01390 RNA polymerase sigma factor insig. 47 89
  Caulobacter crescentus NA1000 Δfur CCNA_01390 RNA polymerase sigma factor insig. 47 89
  Variovorax sp. OAS795 ABID97_RS20345 DUF6596 domain-containing protein insig. 40 96
  Burkholderia phytofirmans PsJN BPHYT_RS31175 RNA polymerase sigma70 factor insig. 40 86
  Variovorax sp. SCN45 GFF4791 RNA polymerase ECF-type sigma factor insig. 38 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15535 DNA-directed RNA polymerase sigma-70 factor insig. 43 91
  Rhodanobacter denitrificans MT42 LRK55_RS15255 sigma factor insig. 43 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS33360 sigma factor insig. 40 88
o Bosea sp. OAE506 ABIE41_RS09620 DUF6596 domain-containing protein insig. 42 88
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4295 Predicted RNA polymerase sigma factor containing a TPR repeat domain insig. 35 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1936 RNA polymerase sigma-70 factor, ECF subfamily insig. 82 35
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12320 RNA polymerase sigma factor insig. 34 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4599 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 97
  Caulobacter crescentus NA1000 CCNA_00393 RNA polymerase sigma factor insig. 39 96
  Caulobacter crescentus NA1000 Δfur CCNA_00393 RNA polymerase sigma factor cofit 39 96
  Burkholderia phytofirmans PsJN BPHYT_RS11635 RNA polymerase subunit sigma-24 insig. 28 59
  Lysobacter sp. OAE881 ABIE51_RS11095 RNA polymerase sigma-70 factor insig. 31 38
  Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 28 39
  Acidovorax sp. GW101-3H11 Ac3H11_1599 RNA polymerase sigma factor insig. 35 18
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 29 37
  Paraburkholderia sabiae LMG 24235 QEN71_RS31540 RNA polymerase sigma-70 factor insig. 30 39
  Pseudomonas fluorescens SBW25 PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 39 17
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16335 sigma-70 family RNA polymerase sigma factor insig. 39 17
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 28 39
  Paraburkholderia graminis OAS925 ABIE53_004797 RNA polymerase sigma-70 factor (ECF subfamily) insig. 26 59
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15060 RNA polymerase sigma factor SigJ insig. 24 60
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00750 RNA polymerase sigma factor SigJ insig. 29 39
  Rhizobium sp. OAE497 ABIE40_RS01975 sigma-70 family RNA polymerase sigma factor insig. 30 37
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 27 37
  Rhodanobacter denitrificans MT42 LRK55_RS14775 RNA polymerase sigma factor SigJ insig. 24 60
  Variovorax sp. SCN45 GFF5440 RNA polymerase ECF-type sigma factor insig. 28 40
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01268 RNA polymerase sigma-70 factor, ECF subfamily insig. 26 58
  Marinobacter adhaerens HP15 HP15_3899 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 25 37
  Kangiella aquimarina DSM 16071 B158DRAFT_0930 RNA polymerase sigma factor, sigma-70 family insig. 36 17
  Variovorax sp. OAS795 ABID97_RS02030 RNA polymerase sigma-70 factor insig. 28 39
  Rhodanobacter sp. FW510-T8 OKGIIK_03820 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 40
  Pseudomonas fluorescens FW300-N2E3 AO353_07625 RNA polymerase subunit sigma-70 insig. 26 38
  Mycobacterium tuberculosis H37Rv Rv1189 Possible alternative RNA polymerase sigma factor SigI no data 26 40