Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2858 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 100 | 100 |
o | Pseudomonas fluorescens FW300-N2E3 | AO353_14400 | | Fis family transcriptional regulator | strong | 96 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_16075 | | Fis family transcriptional regulator | strong | 94 | 100 |
o | Pseudomonas sp. RS175 | PFR28_03718 | | Transcriptional regulatory protein ZraR | strong | 94 | 100 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5156 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 94 | 100 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 95 | 100 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS25735 | | sigma-54-dependent Fis family transcriptional regulator | strong | 95 | 100 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1524 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 94 | 100 |
o | Pseudomonas simiae WCS417 | PS417_23895 | | Fis family transcriptional regulator | no data | 94 | 100 |
o | Pseudomonas putida KT2440 | PP_4696 | | Nitrogen regulation protein NR(I) | strong | 89 | 100 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_0831 | | Two-component response regulator CbrB | sig. | 87 | 100 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0831 | | Two-component response regulator CbrB | no data | 87 | 100 |
o | Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 85 | 100 |
o | Pseudomonas stutzeri RCH2 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 84 | 100 |
o | Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 62 | 99 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 44 | 95 |
o | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 43 | 96 |
o | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 96 |
o | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 42 | 96 |
o | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 42 | 96 |
o | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 42 | 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 42 | 96 |
o | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 42 | 96 |
o | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 96 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1260 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 42 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 46 | 80 |
o | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 42 | 96 |
o | Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 96 |
o | Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 42 | 96 |
o | Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 42 | 96 |
o | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 41 | 96 |
| Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 40 | 97 |
o | Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 41 | 96 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | cofit | 41 | 97 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 41 | 97 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 41 | 97 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 42 | 96 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | cofit | 41 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 41 | 97 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 41 | 97 |
| Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 44 | 81 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 97 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 97 |
| Azospirillum brasilense Sp245 | AZOBR_RS18445 | | chemotaxis protein CheY | insig. | 46 | 80 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | strong | 44 | 81 |
o | Ralstonia solanacearum UW163 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | strong | 44 | 81 |
| Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 44 | 79 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 40 | 97 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 39 | 96 |
o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4656 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 36 | 97 |
| Dechlorosoma suillum PS | Dsui_0135 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 40 | 98 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS07835 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 82 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 40 | 97 |
o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16520 | | DNA-binding response regulator | insig. | 39 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_03494 | | Regulatory protein AtoC | insig. | 45 | 79 |
| Marinobacter adhaerens HP15 | HP15_425 | | two-component response regulator NtrC | strong | 44 | 80 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | insig. | 39 | 97 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | insig. | 39 | 97 |
| Enterobacter sp. TBS_079 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | strong | 39 | 97 |
o | Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 42 | 82 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11070 | | sigma-54 dependent transcriptional regulator | cofit | 39 | 97 |
| Dechlorosoma suillum PS | Dsui_3286 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 45 | 80 |
| Pseudomonas putida KT2440 | PP_3419 | | Sigma-54 dependent transcriptional regulator/response regulator | sig. | 40 | 98 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0118 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 41 | 97 |
| Escherichia coli BL21 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | insig. | 40 | 97 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_03647 | | Sigma-54 interaction domain protein | insig. | 42 | 80 |
| Marinobacter adhaerens HP15 | HP15_2328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 42 | 79 |
| Rahnella sp. WP5 | EX31_RS15880 | | nitrogen regulation protein NR(I) | strong | 40 | 97 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 39 | 98 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05020 | | sigma-54 dependent transcriptional regulator | strong | 39 | 97 |
| Variovorax sp. SCN45 | GFF4432 | | Two-component system response regulator protein | strong | 42 | 81 |
| Klebsiella michiganensis M5al | BWI76_RS00385 | | nitrogen assimilation regulatory protein | strong | 40 | 97 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 38 | 98 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS23515 | | sigma-54 dependent transcriptional regulator | strong | 44 | 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF610 | | Putative sensory histidine kinase YfhA | insig. | 44 | 81 |
| Shewanella amazonensis SB2B | Sama_1549 | | response regulator receiver protein (RefSeq) | insig. | 42 | 80 |
| Dickeya dadantii 3937 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | cofit | 39 | 97 |
| Pseudomonas sp. S08-1 | OH686_16390 | | Type IV fimbriae expression regulatory protein PilR | cofit | 39 | 97 |
| Pseudomonas sp. RS175 | PFR28_03751 | | Regulatory protein AtoC | insig. | 39 | 97 |
| Erwinia tracheiphila SCR3 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | strong | 41 | 97 |
| Escherichia coli ECOR27 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | cofit | 40 | 97 |
| Escherichia coli ECRC101 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | insig. | 40 | 97 |
| Escherichia coli ECRC101 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | insig. | 40 | 97 |
| Escherichia coli ECRC102 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | insig. | 40 | 97 |
| Escherichia coli ECRC98 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | no data | 40 | 97 |
| Escherichia coli ECRC99 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | no data | 40 | 97 |
| Escherichia coli BW25113 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | strong | 40 | 97 |
| Pantoea sp. MT58 | IAI47_00450 | | nitrogen regulation protein NR(I) | strong | 40 | 97 |
| Pectobacterium carotovorum WPP14 | HER17_RS21440 | | nitrogen regulation protein NR(I) | cofit | 39 | 97 |
| Dickeya dianthicola 67-19 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | strong | 39 | 97 |
| Dickeya dianthicola ME23 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | strong | 39 | 97 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_14200 | | transcriptional regulator | insig. | 38 | 97 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2095 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 38 | 97 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS15680 | | chemotaxis protein CheY | strong | 44 | 84 |
| Escherichia fergusonii Becca | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | strong | 40 | 97 |
| Escherichia coli ECRC62 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | insig. | 40 | 97 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | insig. | 40 | 97 |
| Serratia liquefaciens MT49 | IAI46_24960 | | nitrogen regulation protein NR(I) | strong | 39 | 97 |
| Escherichia coli ECOR38 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | cofit | 40 | 97 |
| Escherichia coli Nissle 1917 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | sig. | 40 | 97 |