Homologs of nirD from Rhodanobacter sp. FW510-T8

nirD: benzene 1,2-dioxygenase
SEED: Ferredoxin, 2Fe-2S
KEGG: ferredoxin subunit of phenylpropionate dioxygenase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp. FW510-T8 OKGIIK_09925 nirD benzene 1,2-dioxygenase cofit 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS02805 non-heme iron oxygenase ferredoxin subunit cofit 98 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03055 non-heme iron oxygenase ferredoxin subunit sig. 98 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09430 non-heme iron oxygenase ferredoxin subunit strong 75 100
o Lysobacter sp. OAE881 ABIE51_RS15755 non-heme iron oxygenase ferredoxin subunit insig. 51 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1695.1 Ferredoxin, 2Fe-2S no data 47 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS18660 Rieske 2Fe-2S domain-containing protein insig. 33 99
  Herbaspirillum seropedicae SmR1 HSERO_RS18275 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase insig. 38 88
  Acidovorax sp. GW101-3H11 Ac3H11_215 Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-) insig. 41 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS18920 Rieske (2Fe-2S) protein insig. 42 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS30275 Rieske 2Fe-2S domain-containing protein insig. 37 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14625 non-heme iron oxygenase ferredoxin subunit no data 30 94
o Ralstonia solanacearum UW163 UW163_RS12095 non-heme iron oxygenase ferredoxin subunit insig. 30 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5477 Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-) insig. 36 71
  Sinorhizobium meliloti 1021 SMc01993 dioxygenase ferredoxin protein insig. 45 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5993 Ferredoxin, 2Fe-2S no data 37 76
  Pseudomonas fluorescens FW300-N2E3 AO353_21025 (2Fe-2S)-binding protein no data 39 69
o Ralstonia solanacearum GMI1000 RS_RS05405 non-heme iron oxygenase ferredoxin subunit sig. 29 94
  Pseudomonas fluorescens FW300-N2E3 AO353_24915 hypothetical protein sig. 34 97
o Ralstonia solanacearum PSI07 RPSI07_RS18835 non-heme iron oxygenase ferredoxin subunit no data 29 94
  Variovorax sp. SCN45 GFF196 Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-) insig. 38 74
  Variovorax sp. OAS795 ABID97_RS16365 non-heme iron oxygenase ferredoxin subunit insig. 39 69
o Cupriavidus basilensis FW507-4G11 RR42_RS26435 ferredoxin insig. 30 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4899 Ferredoxin, 2Fe-2S no data 36 72
  Sinorhizobium meliloti 1021 SMa2053 MocE-like protein insig. 42 63
  Acinetobacter radioresistens SK82 MPMX26_00329 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit no data 39 76
  Cupriavidus basilensis FW507-4G11 RR42_RS33940 naphthalene 1,2-dioxygenase insig. 35 71
  Escherichia coli BL21 ECD_02432 3-phenylpropionate dioxygenase, ferredoxin subunit insig. 38 69
  Escherichia coli ECOR27 NOLOHH_13240 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli ECOR38 HEPCGN_20710 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli ECRC100 OKFHMN_21570 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli ECRC101 MCAODC_12100 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli ECRC102 NIAGMN_19340 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli ECRC62 BNILDI_12040 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit cofit 38 69
  Escherichia coli ECRC98 JDDGAC_25245 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit cofit 38 69
  Escherichia coli ECRC99 KEDOAH_06650 hcaC bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit no data 38 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01169 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit insig. 38 69
  Escherichia coli BW25113 b2540 hcaC 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) sig. 38 69
o Rhizobium sp. OAE497 ABIE40_RS22815 MocE family 2Fe-2S type ferredoxin insig. 33 95
  Variovorax sp. OAS795 ABID97_RS28330 non-heme iron oxygenase ferredoxin subunit no data 31 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15425 Rieske family ferredoxin insig. 34 77
  Ralstonia solanacearum UW163 UW163_RS12885 Rieske family ferredoxin insig. 34 77
  Synechococcus elongatus PCC 7942 Synpcc7942_2036 hypothetical protein cofit 31 95
  Ralstonia solanacearum PSI07 RPSI07_RS17930 MocE insig. 33 72
  Serratia liquefaciens MT49 IAI46_21120 non-heme iron oxygenase ferredoxin subunit insig. 39 68
  Acinetobacter radioresistens SK82 MPMX26_01896 Naphthalene 1,2-dioxygenase system, ferredoxin component no data 30 86
  Enterobacter sp. TBS_079 MPMX20_03796 Naphthalene 1,2-dioxygenase system, ferredoxin component insig. 44 62
  Paraburkholderia graminis OAS925 ABIE53_004623 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit sig. 38 83
  Burkholderia phytofirmans PsJN BPHYT_RS34930 Rieske (2Fe-2S) protein sig. 40 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS14920 non-heme iron oxygenase ferredoxin subunit insig. 36 67
o Dechlorosoma suillum PS Dsui_1826 NAD(P)H-dependent nitrite reductase, small subunit no data 33 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06454 NAD(P)H-nitrite reductase insig. 42 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03634 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit insig. 38 83
  Pseudomonas fluorescens FW300-N2C3 AO356_30135 Rieske family ferredoxin insig. 35 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2711.1 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) insig. 34 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_501 Ferredoxin reductase insig. 32 76
  Rhizobium sp. OAE497 ABIE40_RS20410 MocE family 2Fe-2S type ferredoxin insig. 28 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS16895 non-heme iron oxygenase ferredoxin subunit cofit 35 83
  Pseudomonas fluorescens SBW25 PFLU_RS11735 Rieske 2Fe-2S domain-containing protein insig. 35 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11735 Rieske 2Fe-2S domain-containing protein insig. 35 68
  Sinorhizobium meliloti 1021 SM_b20819 ferredoxin insig. 34 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS39575 FAD-dependent oxidoreductase insig. 34 74
  Pseudomonas simiae WCS417 PS417_11100 MocE insig. 33 68
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4392 MocE insig. 33 72
o Magnetospirillum magneticum AMB-1 AMB_RS02740 nitrite reductase (NAD(P)H) small subunit no data 33 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1741 Ferredoxin reductase insig. 30 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS09895 FAD-dependent oxidoreductase insig. 34 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4027 Ferredoxin reductase insig. 33 76
  Pseudomonas stutzeri RCH2 Psest_1023 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases no data 30 96
  Rhizobium sp. OAE497 ABIE40_RS25565 nitrite reductase small subunit NirD insig. 33 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2322 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) insig. 33 71
  Paraburkholderia graminis OAS925 ABIE53_006053 phenylpropionate dioxygenase-like ring-hydroxylating dioxygenase large terminal subunit insig. 30 95
  Variovorax sp. SCN45 GFF542 no description insig. 33 93
  Pseudomonas stutzeri RCH2 Psest_1927 nitrite reductase [NAD(P)H], small subunit no data 31 77
  Agrobacterium fabrum C58 Atu3901 nitrite reductase small subunit strong 32 93
  Cupriavidus basilensis FW507-4G11 RR42_RS22505 LysR family transcriptional regulator insig. 36 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3664 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) no data 34 94
  Cupriavidus basilensis FW507-4G11 RR42_RS05220 aromatic-ring-hydroxylating dioxygenase insig. 28 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2379 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) no data 41 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS14030 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 34 70
  Pseudomonas sp. RS175 PFR28_04742 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component insig. 31 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3836 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) insig. 39 51
  Variovorax sp. OAS795 ABID97_RS13420 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 34 70
  Variovorax sp. SCN45 GFF2404 Hypothetical protein with Rieske (2Fe-2S) region insig. 33 73
  Sinorhizobium meliloti 1021 SM_b20985 nitrite reductase [NAD(P)H], small subunit protein no data 30 92
  Pseudomonas sp. RS175 PFR28_01048 Assimilatory nitrite reductase [NAD(P)H] small subunit no data 39 51
  Pseudomonas fluorescens FW300-N2C3 AO356_02775 nitrite reductase no data 39 51
  Pseudomonas fluorescens FW300-N2C3 AO356_29125 vanillate monooxygenase insig. 33 73
  Pseudomonas fluorescens FW300-N2E3 AO353_23120 3-phenylpropionate dioxygenase insig. 31 73
  Bosea sp. OAE506 ABIE41_RS20315 Rieske 2Fe-2S domain-containing protein insig. 31 93
  Pseudomonas fluorescens FW300-N2C3 AO356_10780 pyridine nucleotide-disulfide oxidoreductase insig. 32 76
  Caulobacter crescentus NA1000 CCNA_00652 nitrite reductase (NAD(P)H) small subunit strong 37 69
  Caulobacter crescentus NA1000 Δfur CCNA_00652 nitrite reductase (NAD(P)H) small subunit cofit 37 69
  Acidovorax sp. GW101-3H11 Ac3H11_3238 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) insig. 35 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4102 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) no data 39 51
  Pseudomonas fluorescens FW300-N2E3 AO353_00810 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) strong 37 51
  Burkholderia phytofirmans PsJN BPHYT_RS34940 3-phenylpropionate dioxygenase insig. 36 72
  Dickeya dianthicola ME23 DZA65_RS02600 aromatic ring-hydroxylating dioxygenase subunit alpha insig. 35 73
  Dinoroseobacter shibae DFL-12 Dshi_1668 nitrite reductase (NAD(P)H), small subunit (RefSeq) sig. 34 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03636 Phenylpropionate dioxygenase, large terminal subunit insig. 36 77