| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Acinetobacter radioresistens SK82 | MPMX26_03085 | | HTH-type transcriptional regulator NimR | no data | 100 | 100 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2771 | | AraC-type DNA-binding domain-containing proteins | insig. | 44 | 96 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_02775 | | AraC family transcriptional regulator | insig. | 42 | 94 |
| o | Klebsiella michiganensis M5al | BWI76_RS22110 | | putative helix-turn-helix AraC-type transcriptional regulator | insig. | 41 | 93 |
| o | Pantoea sp. MT58 | IAI47_10240 | | helix-turn-helix transcriptional regulator | insig. | 44 | 94 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS05900 | | helix-turn-helix transcriptional regulator | cofit | 44 | 94 |
| o | Enterobacter sp. TBS_079 | MPMX20_03566 | | HTH-type transcriptional regulator NimR | insig. | 43 | 94 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_05830 | | AraC family transcriptional regulator | insig. | 42 | 96 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS06240 | | helix-turn-helix transcriptional regulator | no data | 42 | 96 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS46555 | | helix-turn-helix transcriptional regulator | insig. | 42 | 96 |
| o | Serratia liquefaciens MT49 | IAI46_09635 | | helix-turn-helix transcriptional regulator | insig. | 45 | 96 |
| o | Rahnella sp. WP5 | EX31_RS24135 | | AraC family transcriptional regulator | insig. | 47 | 93 |
| o | Pseudomonas sp. SVBP6 | COO64_RS24540 | | helix-turn-helix transcriptional regulator | insig. | 40 | 96 |
| o | Variovorax sp. SCN45 | GFF6471 | | Transcriptional regulator, AraC family | insig. | 41 | 88 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS00395 | | AraC family transcriptional regulator | insig. | 38 | 94 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3596 | | Transcriptional regulator, AraC family | insig. | 37 | 96 |
| o | Pseudomonas simiae WCS417 | PS417_14805 | | AraC family transcriptional regulator | insig. | 36 | 95 |
| o | Rhodospirillum rubrum S1H | Rru_A0140 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 37 | 94 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS16815 | | helix-turn-helix transcriptional regulator | insig. | 36 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16815 | | helix-turn-helix transcriptional regulator | insig. | 36 | 95 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS16095 | | helix-turn-helix transcriptional regulator | insig. | 38 | 93 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5680 | | Transcriptional regulator, AraC family | insig. | 36 | 94 |
| o | Pseudomonas putida KT2440 | PP_2365 | | Transcriptional regulator, AraC family | insig. | 33 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS29270 | | AraC family transcriptional regulator | insig. | 34 | 94 |
| o | Pseudomonas segetis P6 | ACVTMO_RS22155 | | AraC family transcriptional regulator | insig. | 36 | 95 |
| o | Shewanella loihica PV-4 | Shew_2711 | | AraC family transcriptional regulator (RefSeq) | insig. | 33 | 96 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS08365 | | AraC family transcriptional regulator | insig. | 35 | 91 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2613 | | AraC-type DNA-binding domain-containing proteins | insig. | 33 | 94 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03280 | | HTH-type transcriptional regulator NimR | cofit | 36 | 95 |
| o | Sphingobium sp. HT1-2 | GFF3437 | | Transcriptional regulator, AraC family | cofit | 33 | 96 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05000 | | AraC family transcriptional regulator | insig. | 36 | 91 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5650 | | Transcriptional regulator, AraC family | insig. | 32 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A1462 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 35 | 89 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS17100 | | AraC family transcriptional regulator | insig. | 31 | 96 |
| o | Pseudomonas orientalis W4I3 | QF045_RS24555 | | helix-turn-helix transcriptional regulator | strong | 35 | 92 |
| o | Rhodopseudomonas palustris CGA009 | TX73_024245 | | helix-turn-helix transcriptional regulator | insig. | 36 | 87 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07475 | | helix-turn-helix transcriptional regulator | insig. | 32 | 94 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS07445 | | AraC family transcriptional regulator | insig. | 34 | 95 |
| o | Ralstonia solanacearum UW163 | UW163_RS06175 | | AraC family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08540 | | helix-turn-helix transcriptional regulator | sig. | 33 | 93 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44310 | | helix-turn-helix transcriptional regulator | insig. | 33 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03420 | | AraC family transcriptional regulator | sig. | 33 | 93 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3420 | | Transcriptional regulator, AraC family | insig. | 32 | 94 |
| o | Azospirillum sp. SherDot2 | MPMX19_03575 | | HTH-type transcriptional regulator NimR | insig. | 31 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_19725 | | AraC family transcriptional regulator | sig. | 34 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27100 | | helix-turn-helix transcriptional regulator | sig. | 34 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24730 | | AraC family transcriptional regulator | sig. | 34 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS31630 | | helix-turn-helix transcriptional regulator | sig. | 34 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS13740 | | helix-turn-helix transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49005 | | helix-turn-helix transcriptional regulator | insig. | 34 | 96 |
| o | Pseudomonas sp. RS175 | PFR28_03295 | | HTH-type transcriptional regulator NimR | insig. | 33 | 95 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS03090 | | helix-turn-helix transcriptional regulator | insig. | 33 | 95 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS09805 | | AraC family transcriptional regulator | insig. | 33 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS13225 | | helix-turn-helix transcriptional regulator | insig. | 34 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48540 | | helix-turn-helix transcriptional regulator | insig. | 34 | 94 |
| | Variovorax sp. SCN45 | GFF3729 | | Transcriptional regulator, AraC family | insig. | 32 | 93 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_0808 | | transcriptional regulator, AraC family (RefSeq) | insig. | 32 | 96 |
| o | Pseudomonas sp. DMC3 | GFF4897 | | HTH-type transcriptional regulator NimR | cofit | 32 | 94 |
| o | Ralstonia solanacearum GMI1000 | RS_RS15385 | | AraC family transcriptional regulator | insig. | 33 | 95 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_27415 | | AraC family transcriptional regulator | insig. | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3490 | | Transcriptional regulator, AraC family | insig. | 34 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20260 | | AraC family transcriptional regulator | sig. | 34 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_08080 | | AraC family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas sp. RS175 | PFR28_05241 | | HTH-type transcriptional regulator NimR | insig. | 33 | 96 |
| | Rhodopseudomonas palustris CGA009 | TX73_008720 | | helix-turn-helix transcriptional regulator | insig. | 33 | 94 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18610 | | AraC family transcriptional regulator | insig. | 32 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS07745 | | helix-turn-helix domain-containing protein | insig. | 30 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04895 | | AraC family transcriptional regulator | insig. | 33 | 95 |
| | Serratia liquefaciens MT49 | IAI46_02585 | | helix-turn-helix transcriptional regulator | insig. | 31 | 89 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03501 | | HTH-type transcriptional regulator NimR | cofit | 31 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03825 | | AraC family transcriptional regulator | sig. | 33 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS05880 | | AraC-type DNA-binding domain-containing protein | sig. | 30 | 96 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS12320 | | AraC family transcriptional regulator | insig. | 32 | 96 |
| o | Sinorhizobium meliloti 1021 | SMc00994 | | transcriptional regulator | insig. | 30 | 96 |
| | Serratia liquefaciens MT49 | IAI46_22565 | | helix-turn-helix transcriptional regulator | insig. | 32 | 94 |
| | Pseudomonas simiae WCS417 | PS417_15525 | | AraC family transcriptional regulator | insig. | 29 | 95 |
| | Pseudomonas simiae WCS417 | PS417_10365 | | AraC family transcriptional regulator | insig. | 36 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 30 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 30 | 95 |
| o | Dechlorosoma suillum PS | Dsui_2181 | | DNA-binding domain-containing protein, AraC-type | insig. | 33 | 88 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02564 | | HTH-type transcriptional regulator NimR | cofit | 34 | 94 |
| o | Agrobacterium fabrum C58 | Atu3153 | | AraC family transcriptional regulator | insig. | 32 | 94 |
| | Pseudomonas sp. DMC3 | GFF1786 | | HTH-type transcriptional regulator NimR | insig. | 31 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08165 | | helix-turn-helix transcriptional regulator | sig. | 33 | 94 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44650 | | helix-turn-helix transcriptional regulator | sig. | 33 | 94 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS06235 | | helix-turn-helix transcriptional regulator | insig. | 31 | 96 |
| | Variovorax sp. SCN45 | GFF334 | | Transcriptional regulator, AraC family | insig. | 32 | 89 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03519 | | HTH-type transcriptional regulator NimR | cofit | 31 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS17905 | | helix-turn-helix transcriptional regulator | insig. | 30 | 96 |
| | Pseudomonas segetis P6 | ACVTMO_RS01750 | | AraC family transcriptional regulator | insig. | 30 | 96 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS08745 | | helix-turn-helix transcriptional regulator | insig. | 32 | 89 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22400 | | AraC family transcriptional regulator | insig. | 30 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS11260 | | helix-turn-helix domain-containing protein | insig. | 29 | 94 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_0649 | | transcriptional regulator, AraC family | insig. | 32 | 96 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0649 | | transcriptional regulator, AraC family | insig. | 32 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_00070 | | AraC family transcriptional regulator | insig. | 33 | 95 |
| | Rhodopseudomonas palustris CGA009 | TX73_014025 | | helix-turn-helix transcriptional regulator | insig. | 30 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05765 | | AraC family transcriptional regulator | insig. | 29 | 93 |
| | Pseudomonas simiae WCS417 | PS417_11485 | | AraC family transcriptional regulator | insig. | 34 | 94 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12080 | | AraC family transcriptional regulator | insig. | 33 | 94 |