Homologs of MIT1002_04087 from Alteromonas macleodii MIT1002

Type-1 restriction enzyme R protein
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

74 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_04087 Type-1 restriction enzyme R protein insig. 100 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_14280 DEAD/DEAH box helicase no data 82 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02139 type I restriction enzyme, R subunit insig. 57 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU1703 type I restriction-modification enzyme, R subunit (TIGR) insig. 57 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13425 DEAD/DEAH box helicase insig. 56 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1523.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) strong 54 100
o Shewanella oneidensis MR-1 SO0380 hsdR-1 type I restriction-modification system, R subunit (NCBI ptt file) insig. 31 87
o Shewanella sp. ANA-3 Shewana3_3790 HsdR family type I site-specific deoxyribonuclease (RefSeq) cofit 31 86
  Paraburkholderia graminis OAS925 ABIE53_000533 type I restriction enzyme R subunit insig. 32 77
o Cupriavidus basilensis FW507-4G11 RR42_RS18675 restriction endonuclease subunit R insig. 30 81
  Escherichia coli ECRC100 OKFHMN_05715 restriction endonuclease subunit R cofit 30 74
o Phaeobacter inhibens DSM 17395 PGA1_c30690 putative type I restriction-modification system, R subunit insig. 27 98
  Rhodanobacter sp. FW510-T8 OKGIIK_06705 Type I restriction enzyme endonuclease subunit insig. 28 92
  Synechocystis sp000284455 PCC 6803 SGL_RS01835 type I restriction endonuclease subunit R cofit 30 75
  Dickeya dianthicola ME23 DZA65_RS04740 HsdR family type I site-specific deoxyribonuclease insig. 30 74
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS05380 HsdR family type I site-specific deoxyribonuclease insig. 28 87
  Castellaniella sp019104865 MT123 ABCV34_RS09190 type I restriction endonuclease subunit R insig. 29 73
  Methanococcus maripaludis JJ MMJJ_RS02745 type I restriction endonuclease subunit R no data 32 69
  Rhodanobacter sp. FW510-T8 OKGIIK_15915 Type I restriction enzyme endonuclease subunit insig. 29 81
  Sinorhizobium meliloti 1021 SMc02292 type I restriction enzyme R protein insig. 31 67
o Xanthobacter sp. DMC5 GFF2200 hypothetical protein insig. 29 87
  Pseudomonas segetis P6 ACVTMO_RS09885 type I restriction endonuclease subunit R insig. 32 60
  Rhodanobacter denitrificans MT42 LRK55_RS10135 type I restriction endonuclease subunit R cofit 30 66
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10495 type I restriction endonuclease subunit R cofit 30 66
  Castellaniella sp019104865 MT123 ABCV34_RS11910 type I restriction endonuclease subunit R insig. 29 68
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08925 type I restriction endonuclease subunit R insig. 29 71
  Shewanella sp. ANA-3 Shewana3_4244 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 30 62
  Azospirillum sp. SherDot2 MPMX19_00137 hypothetical protein cofit 30 59
  Pseudomonas stutzeri RCH2 Psest_4044 type I site-specific deoxyribonuclease, HsdR family strong 30 59
  Rhodanobacter sp. FW510-T8 OKGIIK_08955 Type I restriction enzyme endonuclease subunit insig. 28 61
  Bacteroides ovatus ATCC 8483 BACOVA_04167 type I site-specific deoxyribonuclease, HsdR family insig. 30 60
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06660 type I restriction-modification system endonuclease insig. 30 61
  Klebsiella michiganensis M5al BWI76_RS03670 type I restriction-modification system subunit R insig. 30 57
  Escherichia coli ECOR38 HEPCGN_10720 type I restriction endonuclease insig. 29 70
  Escherichia fergusonii Becca EFB2_04103 hypothetical protein insig. 29 56
  Escherichia coli Nissle 1917 ECOLIN_RS24950 HsdR family type I site-specific deoxyribonuclease insig. 29 56
  Kangiella aquimarina DSM 16071 B158DRAFT_1641 type I site-specific deoxyribonuclease, HsdR family insig. 26 72
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14275 type I restriction endonuclease no data 70 12
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08640 HsdR family type I site-specific deoxyribonuclease insig. 28 69
  Pseudomonas sp. DMC3 GFF4952 hypothetical protein insig. 26 69
  Dickeya dianthicola ME23 DZA65_RS03370 type I restriction endonuclease subunit R insig. 27 56
  Escherichia coli ECRC62 BNILDI_07600 hsdR Type I restriction enzyme EcoR124II endonuclease subunit insig. 27 58
  Fusobacterium nucleatum SB010 HUW76_08985 type I restriction endonuclease subunit R strong 28 56
  Alteromonas macleodii MIT1002 MIT1002_03210 Type-1 restriction enzyme R protein insig. 28 54
  Alteromonas macleodii MIT1002 MIT1002_00593 Type I restriction enzyme EcoR124II R protein cofit 27 53
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4436 type I site-specific deoxyribonuclease, HsdR family insig. 25 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15095 type I restriction endonuclease subunit R no data 28 57
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03160 type I restriction endonuclease subunit R cofit 24 59
  Cellulophaga baltica 18 M666_RS02045 type I restriction endonuclease subunit R cofit 25 56
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2633 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) no data 26 58
  Bacteroides thetaiotaomicron VPI-5482 BT4535 Type I restriction enzyme EcoR124II R protein (NCBI ptt file) cofit 25 59
  Pseudomonas orientalis W4I3 QF045_RS26425 type I restriction endonuclease insig. 25 67
  Bacteroides ovatus ATCC 8483 BACOVA_05330 type I site-specific deoxyribonuclease, HsdR family cofit 26 55
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.611.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 25 57
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02835 type I restriction endonuclease subunit R insig. 25 56
  Herbaspirillum seropedicae SmR1 HSERO_RS22780 DEAD/DEAH box helicase insig. 23 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_08855 type I restriction endonuclease subunit R insig. 26 53
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3936.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 25 52
  Marinobacter adhaerens HP15 HP15_1582 type III restriction enzyme, res subunit insig. 24 58
  Pseudomonas stutzeri RCH2 Psest_0876 Type III restriction enzyme, res subunit./Type I restriction enzyme R protein N terminus (HSDR_N). insig. 25 53
  Acinetobacter radioresistens SK82 MPMX26_02867 hypothetical protein insig. 24 53
  Rhodanobacter denitrificans MT42 LRK55_RS00325 type I restriction endonuclease strong 23 54
  Cellulophaga baltica 18 M666_RS14710 DEAD/DEAH box helicase family protein insig. 25 51
  Shewanella sp. ANA-3 Shewana3_4164 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 23 33
  Pseudomonas stutzeri RCH2 Psest_3407 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 25 40
  Phocaeicola dorei CL03T12C01 ABI39_RS01800 type I restriction endonuclease subunit R insig. 22 58
  Erwinia amylovora T8 OLJFJH_08155 hypothetical protein insig. 73 5
  Klebsiella pneumoniae MKP103 KDGMDA_01860 type I restriction endonuclease subunit R cofit 24 38
  Synechococcus elongatus PCC 7942 Synpcc7942_1065 DEAD/DEAH box helicase-like insig. 24 39
  Caulobacter crescentus NA1000 CCNA_00659 type I restriction-modification system restriction subunit insig. 23 39
  Caulobacter crescentus NA1000 Δfur CCNA_00659 type I restriction-modification system restriction subunit cofit 23 39
  Shewanella sp. ANA-3 Shewana3_4164 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 50 6
  Methylophilus sp. DMC18 GFF1952 hypothetical protein cofit 26 30
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 27 19