| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Alteromonas macleodii MIT1002 | MIT1002_03889 | | Cyn operon transcriptional activator | insig. | 100 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_3930 | | LysR family transcriptional regulator (RefSeq) | cofit | 43 | 100 |
| o | Shewanella oneidensis MR-1 | SO4524 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 42 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS26890 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_24930 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS31445 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| o | Pseudomonas segetis P6 | ACVTMO_RS19835 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| o | Pseudomonas sp. S08-1 | OH686_07440 | | Transcriptional regulator, LysR family | insig. | 31 | 96 |
| | Serratia liquefaciens MT49 | IAI46_03125 | | LysR family transcriptional regulator | insig. | 32 | 95 |
| | Serratia liquefaciens MT49 | IAI46_11300 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3517 | | Transcriptional regulator, LysR family | insig. | 31 | 98 |
| | Rahnella sp. WP5 | EX31_RS12270 | | HTH-type transcriptional activator AaeR | insig. | 28 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 27 | 97 |
| | Dickeya dianthicola 67-19 | HGI48_RS01385 | | HTH-type transcriptional activator AaeR | insig. | 29 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS01445 | | HTH-type transcriptional activator AaeR | insig. | 29 | 98 |
| | Serratia liquefaciens MT49 | IAI46_22620 | | HTH-type transcriptional activator AaeR | insig. | 29 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1988 | | Transcriptional regulator, LysR family | insig. | 33 | 99 |
| | Dickeya dadantii 3937 | DDA3937_RS01465 | | HTH-type transcriptional activator AaeR | insig. | 28 | 98 |
| | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 32 | 98 |
| | Shewanella loihica PV-4 | Shew_0028 | | LysR family transcriptional regulator (RefSeq) | insig. | 29 | 98 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 28 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_06240 | | HTH-type transcriptional activator AaeR | insig. | 28 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS20120 | | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli BL21 | ECD_03103 | | transcriptional regulator for aaeXAB operon | insig. | 27 | 98 |
| | Escherichia fergusonii Becca | EFB2_00587 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 98 |
| | Escherichia coli ECOR27 | NOLOHH_09560 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECOR38 | HEPCGN_16625 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECRC100 | OKFHMN_17760 | aaeR | HTH-type transcriptional activator AaeR | cofit | 27 | 98 |
| | Escherichia coli ECRC101 | MCAODC_08280 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECRC102 | NIAGMN_15520 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECRC62 | BNILDI_01975 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECRC98 | JDDGAC_21385 | aaeR | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli ECRC99 | KEDOAH_10390 | aaeR | HTH-type transcriptional activator AaeR | no data | 27 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00461 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 98 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS18590 | | HTH-type transcriptional activator AaeR | insig. | 27 | 98 |
| | Escherichia coli BW25113 | b3243 | aaeR | predicted DNA-binding transcriptional regulator, efflux system (NCBI) | insig. | 27 | 98 |
| | Erwinia amylovora T8 | OLJFJH_06945 | | HTH-type transcriptional activator AaeR | insig. | 26 | 98 |
| o | Acinetobacter radioresistens SK82 | MPMX26_01056 | | HTH-type transcriptional regulator DmlR | cofit | 29 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS18470 | | LysR family transcriptional regulator | insig. | 29 | 98 |
| | Pantoea sp. MT58 | IAI47_02470 | | HTH-type transcriptional activator AaeR | insig. | 28 | 98 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 29 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13530 | | LysR family transcriptional regulator | no data | 29 | 96 |
| | Pectobacterium carotovorum WPP14 | HER17_RS02735 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 29 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3600 | | Transcriptional regulator | insig. | 26 | 93 |
| | Shewanella amazonensis SB2B | Sama_3549 | | LyrR family transcriptional regulator (RefSeq) | insig. | 28 | 100 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2141 | | LysR family transcriptional regulator QseA | insig. | 27 | 97 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS11065 | | HTH-type transcriptional activator AaeR | cofit | 28 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21770 | | LysR family transcriptional regulator | cofit | 28 | 94 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 29 | 97 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS25460 | | transcriptional regulator | insig. | 27 | 98 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04730 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18640 | | LysR family transcriptional regulator | insig. | 27 | 97 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05355 | | LysR family transcriptional regulator | insig. | 28 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 28 | 96 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3294 | | Transcriptional regulator | insig. | 27 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_04149 | | HTH-type transcriptional regulator DmlR | insig. | 27 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 28 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01055 | | LysR family transcriptional regulator | insig. | 25 | 97 |
| | Pantoea sp. MT58 | IAI47_16330 | | LysR family transcriptional regulator | insig. | 27 | 94 |
| | Serratia liquefaciens MT49 | IAI46_02960 | | LysR family transcriptional regulator | insig. | 27 | 100 |
| | Erwinia amylovora T8 | OLJFJH_01560 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 29 | 97 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 26 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23240 | | LysR family transcriptional regulator | insig. | 28 | 87 |
| | Variovorax sp. OAS795 | ABID97_RS22315 | | LysR family transcriptional regulator | insig. | 25 | 98 |
| | Variovorax sp. SCN45 | GFF1801 | | Transcriptional regulator, LysR family | insig. | 26 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 29 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 26 | 100 |
| | Rahnella sp. WP5 | EX31_RS04005 | | LysR family transcriptional regulator | insig. | 27 | 93 |
| | Enterobacter sp. TBS_079 | MPMX20_00697 | | HTH-type transcriptional regulator PgrR | insig. | 25 | 93 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02245 | | transcriptional regulator, LysR family | strong | 28 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000382 | | DNA-binding transcriptional LysR family regulator | strong | 28 | 98 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21145 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14490 | | LysR family transcriptional regulator | insig. | 26 | 94 |
| | Acinetobacter radioresistens SK82 | MPMX26_01513 | | HTH-type transcriptional regulator DmlR | no data | 25 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 26 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3589 | | Transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS26735 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 25 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00135 | | LysR family transcriptional regulator | cofit | 28 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 28 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 27 | 93 |
| | Sinorhizobium meliloti 1021 | SMa1602 | | LysR family transcriptional regulator | insig. | 27 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 27 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 29 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01435 | | LysR family transcriptional regulator | strong | 28 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Serratia liquefaciens MT49 | IAI46_16295 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 26 | 97 |
| | Agrobacterium fabrum C58 | Atu3197 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_004366 | | DNA-binding transcriptional LysR family regulator | sig. | 29 | 93 |
| | Variovorax sp. OAS795 | ABID97_RS00735 | | LysR family transcriptional regulator | strong | 29 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18185 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| | Rahnella sp. WP5 | EX31_RS06010 | | LysR family transcriptional regulator | insig. | 28 | 72 |
| | Dechlorosoma suillum PS | Dsui_2353 | | transcriptional regulator | insig. | 28 | 98 |
| | Pseudomonas simiae WCS417 | PS417_11465 | | LysR family transcriptional regulator | insig. | 26 | 100 |