| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Alteromonas macleodii MIT1002 | MIT1002_03810 | | putative transcriptional regulatory protein YedW | insig. | 100 | 100 |
| | Alteromonas macleodii MIT1002 | MIT1002_02074 | | Staphylococcal respiratory response protein A | insig. | 59 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS11875 | | response regulator transcription factor | insig. | 46 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS07800 | pirR;inference=COORDINATES | response regulator transcription factor PirR | insig. | 41 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44995 | pirR;inference=COORDINATES | response regulator transcription factor PirR | insig. | 41 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_04175 | | DNA-binding response regulator | insig. | 41 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS07345 | | response regulator transcription factor | insig. | 42 | 99 |
| | Pseudomonas sp. DMC3 | GFF4822 | | Transcriptional regulatory protein OmpR | insig. | 42 | 99 |
| | Pseudomonas putida KT2440 | PP_1651 | | two-component response regulator | insig. | 42 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS20025 | | response regulator transcription factor | insig. | 41 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS03775 | | response regulator transcription factor | insig. | 44 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34810 | | response regulator transcription factor | insig. | 44 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13495 | | DNA-binding response regulator | strong | 44 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS23890 | | response regulator transcription factor | insig. | 40 | 99 |
| | Pseudomonas putida KT2440 | PP_0534 | | putative Transcriptional regulator PfeR | insig. | 41 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13590 | | DNA-binding response regulator | insig. | 42 | 97 |
| | Pseudomonas orientalis W4I3 | QF045_RS18120 | | response regulator transcription factor | cofit | 41 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03600 | | Transcriptional regulatory protein BaeR | cofit | 40 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2030 | | Two-component response regulator PfeR, enterobactin | insig. | 40 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_02730 | | transcriptional regulator | insig. | 40 | 98 |
| | Pseudomonas simiae WCS417 | PS417_16365 | | transcriptional regulator | no data | 40 | 98 |
| | Shewanella loihica PV-4 | Shew_3570 | | two component transcriptional regulator (RefSeq) | strong | 45 | 97 |
| | Shewanella amazonensis SB2B | Sama_3432 | | response regulator receiver protein (RefSeq) | sig. | 44 | 97 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS18585 | | envelope stress response regulator transcription factor CpxR | no data | 40 | 97 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00665 | | envelope stress response regulator transcription factor CpxR | cofit | 40 | 97 |
| | Alteromonas macleodii MIT1002 | MIT1002_00477 | | Response regulator ArlR | insig. | 37 | 97 |
| | Shewanella amazonensis SB2B | Sama_1718 | | response regulator receiver protein (RefSeq) | strong | 40 | 98 |
| | Erwinia amylovora T8 | OLJFJH_05935 | | envelope stress response regulator transcription factor CpxR | sig. | 39 | 97 |
| | Pantoea sp. MT58 | IAI47_00760 | | envelope stress response regulator transcription factor CpxR | strong | 40 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3503 | | Two-component response regulator PfeR, enterobactin | insig. | 41 | 94 |
| | Rahnella sp. WP5 | EX31_RS14320 | | envelope stress response regulator transcription factor CpxR | insig. | 39 | 97 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0066 | | two component transcriptional regulator, winged helix family | cofit | 34 | 98 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_07940 | cpxR | envelope stress response regulator transcription factor CpxR | no data | 39 | 97 |
| | Erwinia tracheiphila SCR3 | LU632_RS21855 | cpxR | envelope stress response regulator transcription factor CpxR | strong | 39 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10990 | | chemotaxis protein CheY | insig. | 34 | 98 |
| | Marinobacter adhaerens HP15 | HP15_2615 | | two component transcriptional regulator, winged helix family | sig. | 38 | 99 |
| | Variovorax sp. SCN45 | GFF1238 | | Two-component transcriptional response regulator, OmpR family | insig. | 34 | 98 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18360 | | response regulator transcription factor | strong | 37 | 98 |
| | Pseudomonas putida KT2440 | PP_1181 | | DNA-binding response regulator | strong | 33 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2093 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 33 | 98 |
| | Pseudomonas sp. DMC3 | GFF1578 | | Transcriptional regulatory protein CusR | cofit | 38 | 97 |
| | Shewanella loihica PV-4 | Shew_1936 | | two component transcriptional regulator (RefSeq) | no data | 36 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4267 | | DNA-binding response regulator | no data | 38 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS03810 | | response regulator transcription factor | insig. | 34 | 100 |
| | Sinorhizobium meliloti 1021 | SM_b21561 | | two component response regulator protein | insig. | 35 | 98 |
| | Acinetobacter radioresistens SK82 | MPMX26_02559 | | Transcriptional regulatory protein RstA | no data | 34 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_01501 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | insig. | 33 | 98 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0882 | | two component transcriptional regulator, winged helix family (RefSeq) | strong | 36 | 100 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_00635 | ompR | DNA-binding response regulator | no data | 36 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2280 | | Copper-sensing two-component system response regulator CpxR | strong | 39 | 97 |
| | Escherichia coli BL21 | ECD_03798 | | response regulator in two-component regulatory system with CpxA | strong | 39 | 97 |
| | Escherichia fergusonii Becca | EFB2_04705 | | Transcriptional regulatory protein CpxR | insig. | 39 | 97 |
| | Escherichia coli ECOR27 | NOLOHH_05980 | cpxR | envelope stress response regulator transcription factor CpxR | cofit | 39 | 97 |
| | Escherichia coli ECOR38 | HEPCGN_12490 | cpxR | envelope stress response regulator transcription factor CpxR | strong | 39 | 97 |
| | Escherichia coli ECRC100 | OKFHMN_13845 | cpxR | envelope stress response regulator transcription factor CpxR | cofit | 39 | 97 |
| | Escherichia coli ECRC101 | MCAODC_04345 | cpxR | envelope stress response regulator transcription factor CpxR | strong | 39 | 97 |
| | Escherichia coli ECRC102 | NIAGMN_11600 | cpxR | envelope stress response regulator transcription factor CpxR | insig. | 39 | 97 |
| | Escherichia coli ECRC62 | BNILDI_05545 | cpxR | envelope stress response regulator transcription factor CpxR | insig. | 39 | 97 |
| | Escherichia coli ECRC98 | JDDGAC_17470 | cpxR | envelope stress response regulator transcription factor CpxR | sig. | 39 | 97 |
| | Escherichia coli ECRC99 | KEDOAH_14310 | cpxR | envelope stress response regulator transcription factor CpxR | no data | 39 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04138 | | Transcriptional regulatory protein CpxR | strong | 39 | 97 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22540 | | envelope stress response regulator transcription factor CpxR | no data | 39 | 97 |
| | Escherichia coli BW25113 | b3912 | cpxR | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | strong | 39 | 97 |
| | Shewanella oneidensis MR-1 | SO2426 | | DNA-binding response regulator (NCBI ptt file) | strong | 36 | 99 |
| | Variovorax sp. SCN45 | GFF5074 | | Two-component transcriptional response regulator Dtpsy_0213, OmpR family | insig. | 34 | 100 |
| | Rahnella sp. WP5 | EX31_RS00555 | | response regulator transcription factor | insig. | 33 | 100 |
| | Serratia liquefaciens MT49 | IAI46_07680 | | response regulator transcription factor | insig. | 32 | 100 |
| | Serratia liquefaciens MT49 | IAI46_16745 | | heavy metal response regulator transcription factor | insig. | 35 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS02000 | | response regulator transcription factor | insig. | 33 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17925 | | transcriptional regulator | insig. | 37 | 97 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS17390 | | response regulator transcription factor | no data | 36 | 98 |
| | Acinetobacter baumannii LAC-4 | RR41_RS15530 | | response regulator transcription factor BfmR | no data | 34 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09230 | | envelope stress response regulator transcription factor CpxR | strong | 38 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_04556 | | Transcriptional regulatory protein CpxR | strong | 38 | 97 |
| | Pseudomonas orientalis W4I3 | QF045_RS14560 | | response regulator transcription factor | cofit | 38 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12570 | | response regulator transcription factor | insig. | 38 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12570 | | response regulator transcription factor | insig. | 38 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02648 | | Transcriptional regulatory protein CusR | insig. | 38 | 97 |
| | Pseudomonas simiae WCS417 | PS417_11825 | | transcriptional regulator | sig. | 38 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS09840 | | response regulator transcription factor | insig. | 31 | 98 |
| | Pseudomonas sp. SVBP6 | COO64_RS07450 | | response regulator transcription factor | insig. | 35 | 99 |
| | Dechlorosoma suillum PS | Dsui_1852 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 34 | 99 |
| | Escherichia fergusonii Becca | EFB2_04217 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | insig. | 33 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4916 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 32 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4387 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | sig. | 38 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23125 | | transcriptional regulator | sig. | 37 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS02400 | | DNA-binding response regulator | insig. | 32 | 97 |
| | Dickeya dadantii 3937 | DDA3937_RS00780 | | envelope stress response regulator transcription factor CpxR | no data | 39 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS00720 | | DNA-binding response regulator | strong | 38 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3127 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | sig. | 37 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3127 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 37 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_504 | | DNA-binding response regulator | sig. | 36 | 97 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05740 | | response regulator transcription factor | no data | 36 | 98 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05985 | | response regulator transcription factor | cofit | 36 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15610 | | chemotaxis protein CheY | insig. | 32 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_26815 | | transcriptional regulator | insig. | 37 | 97 |
| | Pantoea sp. MT58 | IAI47_05410 | | response regulator transcription factor | insig. | 35 | 98 |
| | Shewanella amazonensis SB2B | Sama_2800 | | response regulator receiver protein (RefSeq) | strong | 35 | 98 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1279 | | two component transcriptional regulator, winged helix family | insig. | 34 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2974 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 32 | 98 |