Homologs of LRK54_RS08905 from Rhodanobacter denitrificans FW104-10B01

integron integrase
SEED: Integron integrase IntIPac

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08905 integron integrase cofit 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS08605 integron integrase insig. 100 88
o Rhodanobacter sp. FW510-T8 OKGIIK_15560 Integrase insig. 69 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.449.1 Integrase insig. 69 88
o Pseudomonas sp. S08-1 OH686_18870 Integron integrase IntIPac insig. 64 83
o Vibrio cholerae E7946 ATCC 55056 CSW01_15405 integron integrase insig. 51 83
o Shewanella amazonensis SB2B Sama_1355 phage integrase family site specific recombinase (RefSeq) insig. 47 83
  Alteromonas macleodii MIT1002 MIT1002_00573 Tyrosine recombinase XerD insig. 48 79
o Shewanella oneidensis MR-1 SO2037 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 45 84
o Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 42 83
  Shewanella amazonensis SB2B Sama_1633 phage integrase family site specific recombinase (RefSeq) insig. 44 80
  Alteromonas macleodii MIT1002 MIT1002_04188 integrase/recombinase insig. 46 48
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 31 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS44370 site-specific integrase insig. 33 80
  Phocaeicola dorei CL03T12C01 ABI39_RS16135 site-specific integrase insig. 32 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS42900 site-specific integrase no data 32 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS39850 site-specific integrase no data 31 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS42300 site-specific integrase no data 31 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS44560 site-specific integrase no data 31 80
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 34 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 31 80
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 28 80
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 29 80
  Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 28 80
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 32 80
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 32 80
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 28 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 32 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 32 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 32 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04935 site-specific integrase sig. 27 80
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 33 80
o Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 33 80
  Bifidobacterium breve UCC2003 BBR_RS16755 site-specific tyrosine recombinase XerD strong 28 76
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 30 80
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 31 71
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 31 79
  Shewanella oneidensis MR-1 SO2164 site-specific recombinase, phage integrase family (NCBI ptt file) no data 28 82
  Shewanella oneidensis MR-1 SO2211 site-specific recombinase, phage integrase family (NCBI ptt file) no data 28 82
  Shewanella oneidensis MR-1 SO2528 site-specific recombinase, phage integrase family (NCBI ptt file) no data 27 82
  Shewanella oneidensis MR-1 SO2036 site-specific recombinase, phage integrase family (NCBI ptt file) no data 27 82
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 30 74
  Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 31 70
  Ralstonia solanacearum GMI1000 RS_RS17610 recombinase XerC insig. 31 79
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 33 57
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 28 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 25 83
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 24 72
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 30 55
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 33 82
  Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 28 72
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 28 77
  Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 29 57
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 29 55
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02835 integrase strong 27 67
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 29 73
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 26 83
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 27 83
  Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 29 55
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 32 54
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 30 68
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 28 77
  Ralstonia solanacearum PSI07 RPSI07_RS12160 site-specific tyrosine recombinase XerD insig. 31 56
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 29 78
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 29 70
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 30 79
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 28 55
  Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 29 56
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 29 71
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 28 76
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 28 55
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 28 57
  Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 27 55
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 27 55
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 27 55
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 27 55
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 27 55
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 24 76
  Caulobacter crescentus NA1000 CCNA_03101 site-specific tyrosine recombinase XerD strong 29 71
  Caulobacter crescentus NA1000 Δfur CCNA_03101 site-specific tyrosine recombinase XerD cofit 29 71
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 29 71
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 29 77
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 27 55
  Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 27 57
  Bacteroides ovatus ATCC 8483 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein insig. 26 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 25 72
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 31 67
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 29 70
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 29 70
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD cofit 29 71
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD cofit 29 71
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 29 71
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD cofit 29 71
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 29 71
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 29 71
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 29 55
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 29 55
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 27 71
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 32 55
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 29 71