| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04090 | | response regulator transcription factor | sig. | 100 | 100 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS03860 | | response regulator transcription factor | cofit | 100 | 100 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05835 | | response regulator transcription factor | cofit | 99 | 100 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_10950 | ompR | DNA-binding response regulator | insig. | 98 | 100 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4286.1 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 71 | 95 |
| o | Lysobacter sp. OAE881 | ABIE51_RS05295 | | response regulator transcription factor | strong | 72 | 93 |
| | Lysobacter sp. OAE881 | ABIE51_RS03740 | | response regulator transcription factor | cofit | 62 | 97 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11615 | | response regulator transcription factor | no data | 58 | 91 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_0632 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 55 | 92 |
| | Lysobacter sp. OAE881 | ABIE51_RS16515 | | response regulator transcription factor | no data | 59 | 91 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_11850 | ompR | DNA-binding response regulator | no data | 57 | 91 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16525 | | response regulator transcription factor | no data | 57 | 91 |
| | Pseudomonas stutzeri RCH2 | Psest_3465 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 57 | 92 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11745 | | response regulator transcription factor | no data | 57 | 91 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12010 | | response regulator transcription factor | strong | 57 | 91 |
| | Pseudomonas segetis P6 | MPMX49_03793 | | Transcriptional activator protein CzcR | strong | 57 | 91 |
| | Pseudomonas sp. DMC3 | GFF5074 | | Transcriptional activator protein CzcR | cofit | 56 | 91 |
| | Pseudomonas sp. RS175 | PFR28_03335 | | Transcriptional activator protein CzcR | strong | 55 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18415 | | XRE family transcriptional regulator | strong | 55 | 91 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5609 | | DNA-binding response regulator ColR | strong | 55 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1767 | | DNA-binding response regulator ColR | strong | 55 | 91 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1335.1 | | Two-component system regulatory protein | no data | 56 | 91 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04020 | | XRE family transcriptional regulator | strong | 56 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_724 | | DNA-binding response regulator ColR | strong | 55 | 91 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24430 | | response regulator transcription factor | insig. | 55 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24430 | | response regulator transcription factor | sig. | 55 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04707 | | Transcriptional activator protein CzcR | cofit | 55 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS24960 | | two-component system response regulator ColR | cofit | 55 | 91 |
| | Pseudomonas simiae WCS417 | PS417_22780 | | XRE family transcriptional regulator | strong | 55 | 91 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS24585 | | response regulator transcription factor | cofit | 56 | 91 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_02195 | | DNA-binding response regulator | sig. | 56 | 91 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57035 | | response regulator transcription factor | insig. | 56 | 91 |
| | Lysobacter sp. OAE881 | ABIE51_RS17870 | | response regulator transcription factor | insig. | 52 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS14980 | colR | two-component system response regulator ColR | insig. | 55 | 91 |
| | Pseudomonas putida KT2440 | PP_0901 | | DNA-binding response regulator | strong | 55 | 91 |
| | Pseudomonas sp. SVBP6 | COO64_RS12030 | colR | two-component system response regulator ColR | insig. | 54 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4070 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | strong | 54 | 91 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4070 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 54 | 91 |
| | Pseudomonas sp. S08-1 | OH686_17340 | | DNA-binding response regulator ColR | insig. | 56 | 91 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS19100 | | response regulator transcription factor | insig. | 54 | 91 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS18610 | | response regulator transcription factor | sig. | 54 | 91 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS09005 | | response regulator transcription factor | insig. | 53 | 91 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_06035 | ompR | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 53 | 91 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3867.1 | | Two-component system regulatory protein | insig. | 51 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS08445 | | response regulator transcription factor | insig. | 51 | 90 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS06610 | | response regulator transcription factor | insig. | 48 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3091 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 46 | 91 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3091 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | sig. | 46 | 91 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01560 | cprR;inference=COORDINATES | cationic peptide response regulator transcription factor CprR | insig. | 51 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15645 | | cationic peptide response regulator transcription factor CprR | sig. | 51 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34000 | cprR;inference=COORDINATES | cationic peptide response regulator transcription factor CprR | insig. | 51 | 90 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15065 | | XRE family transcriptional regulator | strong | 50 | 91 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_11110 | ompR | DNA-binding response regulator | strong | 47 | 90 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS04005 | | response regulator transcription factor | strong | 47 | 90 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04235 | | response regulator transcription factor | strong | 47 | 90 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2375 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 46 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2375 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 46 | 93 |
| | Shewanella loihica PV-4 | Shew_3317 | | two component transcriptional regulator (RefSeq) | insig. | 44 | 90 |
| o | Shewanella oneidensis MR-1 | SO4623 | | DNA-binding response regulator (NCBI ptt file) | insig. | 44 | 91 |
| o | Shewanella amazonensis SB2B | Sama_0146 | | response regulator receiver protein (RefSeq) | insig. | 46 | 90 |
| o | Shewanella sp. ANA-3 | Shewana3_4007 | | two component transcriptional regulator (RefSeq) | insig. | 45 | 91 |
| | Shewanella oneidensis MR-1 | SO4637 | | DNA-binding response regulator (NCBI ptt file) | insig. | 42 | 90 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1404 | | two component transcriptional regulator, winged helix family | no data | 43 | 90 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02615 | | DNA-binding response regulator | sig. | 41 | 92 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12420 | | transcriptional regulator | insig. | 45 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS04165 | | response regulator transcription factor | insig. | 44 | 91 |
| | Variovorax sp. SCN45 | GFF11 | | Two-component transcriptional response regulator, OmpR family | insig. | 44 | 96 |
| | Pseudomonas sp. RS175 | PFR28_03578 | | Transcriptional activator protein CzcR | sig. | 43 | 91 |
| | Variovorax sp. SCN45 | GFF5812 | | DNA-binding heavy metal response regulator | insig. | 44 | 98 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14010 | | response regulator transcription factor HprR | cofit | 41 | 93 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17205 | | transcriptional regulator | insig. | 43 | 90 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5366 | | DNA-binding heavy metal response regulator | insig. | 43 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04765 | | heavy metal response regulator transcription factor | insig. | 42 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04765 | | heavy metal response regulator transcription factor | insig. | 42 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01140 | | Transcriptional activator protein CzcR | insig. | 43 | 91 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15395 | | transcriptional regulator | sig. | 43 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS24495 | | transcriptional regulator | strong | 42 | 91 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1663 | | DNA-binding heavy metal response regulator | insig. | 43 | 90 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3273 | | Putative two-component system response regulator YedW | insig. | 41 | 90 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3258 | | DNA-binding heavy metal response regulator | insig. | 43 | 90 |
| o | Synechocystis sp000284455 PCC 6803 | SGL_RS06340 | | response regulator transcription factor | strong | 39 | 89 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS02355 | | DNA-binding response regulator | insig. | 44 | 92 |
| | Pseudomonas simiae WCS417 | PS417_04690 | | transcriptional regulator | strong | 43 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS14620 | | phosphate regulon transcriptional regulator PhoB | insig. | 42 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS25955 | | transcriptional regulator | insig. | 45 | 90 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS17160 | | heavy metal response regulator transcription factor | insig. | 45 | 90 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS17690 | | heavy metal response regulator transcription factor | insig. | 45 | 90 |
| | Pseudomonas orientalis W4I3 | QF045_RS07685 | | heavy metal response regulator transcription factor | cofit | 42 | 91 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS20860 | | DNA-binding response regulator | insig. | 44 | 92 |
| | Ralstonia solanacearum UW163 | UW163_RS21995 | | DNA-binding response regulator | insig. | 44 | 92 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30960 | | transcriptional regulator | strong | 45 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS19270 | | heavy metal response regulator transcription factor | insig. | 42 | 91 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS17060 | | heavy metal response regulator transcription factor | insig. | 44 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29120 | | transcriptional regulator | insig. | 44 | 90 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4800 | | Heavy metal response regulator | insig. | 43 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4800 | | Heavy metal response regulator | insig. | 43 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01441 | | two component heavy metal response transcriptional regulator, winged helix family | insig. | 43 | 90 |
| | Agrobacterium fabrum C58 | Atu0629 | | two component response regulator | insig. | 41 | 90 |
| o | Dechlorosoma suillum PS | Dsui_1617 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | no data | 46 | 90 |
| | Pseudomonas sp. DMC3 | GFF4407 | | Transcriptional activator protein CzcR | insig. | 42 | 90 |