Homologs of LRK54_RS04090 from Rhodanobacter denitrificans FW104-10B01

response regulator transcription factor
SEED: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04090 response regulator transcription factor sig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS03860 response regulator transcription factor cofit 100 100
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS05835 response regulator transcription factor cofit 99 100
o Rhodanobacter sp. FW510-T8 OKGIIK_10950 ompR DNA-binding response regulator insig. 98 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4286.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 71 95
o Lysobacter sp. OAE881 ABIE51_RS05295 response regulator transcription factor strong 72 93
  Lysobacter sp. OAE881 ABIE51_RS03740 response regulator transcription factor cofit 62 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11615 response regulator transcription factor no data 58 91
o Kangiella aquimarina DSM 16071 B158DRAFT_0632 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain insig. 55 92
  Lysobacter sp. OAE881 ABIE51_RS16515 response regulator transcription factor no data 59 91
  Rhodanobacter sp. FW510-T8 OKGIIK_11850 ompR DNA-binding response regulator no data 57 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16525 response regulator transcription factor no data 57 91
  Pseudomonas stutzeri RCH2 Psest_3465 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain strong 57 92
  Rhodanobacter denitrificans MT42 LRK55_RS11745 response regulator transcription factor no data 57 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12010 response regulator transcription factor strong 57 91
  Pseudomonas segetis P6 MPMX49_03793 Transcriptional activator protein CzcR strong 57 91
  Pseudomonas sp. DMC3 GFF5074 Transcriptional activator protein CzcR cofit 56 91
  Pseudomonas sp. RS175 PFR28_03335 Transcriptional activator protein CzcR strong 55 91
  Pseudomonas fluorescens FW300-N2C3 AO356_18415 XRE family transcriptional regulator strong 55 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5609 DNA-binding response regulator ColR strong 55 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1767 DNA-binding response regulator ColR strong 55 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1335.1 Two-component system regulatory protein no data 56 91
  Pseudomonas fluorescens FW300-N2E3 AO353_04020 XRE family transcriptional regulator strong 56 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_724 DNA-binding response regulator ColR strong 55 91
  Pseudomonas fluorescens SBW25 PFLU_RS24430 response regulator transcription factor insig. 55 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24430 response regulator transcription factor sig. 55 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04707 Transcriptional activator protein CzcR cofit 55 91
  Pseudomonas orientalis W4I3 QF045_RS24960 two-component system response regulator ColR cofit 55 91
  Pseudomonas simiae WCS417 PS417_22780 XRE family transcriptional regulator strong 55 91
  Pseudomonas aeruginosa MRSN321 DY961_RS24585 response regulator transcription factor cofit 56 91
  Pseudomonas aeruginosa PA14 IKLFDK_02195 DNA-binding response regulator sig. 56 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS57035 response regulator transcription factor insig. 56 91
  Lysobacter sp. OAE881 ABIE51_RS17870 response regulator transcription factor insig. 52 97
  Pseudomonas sp. BP01 JOY50_RS14980 colR two-component system response regulator ColR insig. 55 91
  Pseudomonas putida KT2440 PP_0901 DNA-binding response regulator strong 55 91
  Pseudomonas sp. SVBP6 COO64_RS12030 colR two-component system response regulator ColR insig. 54 91
  Pseudomonas syringae pv. syringae B728a Psyr_4070 Response regulator receiver:Transcriptional regulatory protein, C-terminal strong 54 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4070 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 54 91
  Pseudomonas sp. S08-1 OH686_17340 DNA-binding response regulator ColR insig. 56 91
  Rhodanobacter denitrificans MT42 LRK55_RS19100 response regulator transcription factor insig. 54 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS18610 response regulator transcription factor sig. 54 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09005 response regulator transcription factor insig. 53 91
  Rhodanobacter sp. FW510-T8 OKGIIK_06035 ompR DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain insig. 53 91
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3867.1 Two-component system regulatory protein insig. 51 90
  Lysobacter sp. OAE881 ABIE51_RS08445 response regulator transcription factor insig. 51 90
o Acinetobacter baumannii LAC-4 RR41_RS06610 response regulator transcription factor insig. 48 91
  Pseudomonas syringae pv. syringae B728a Psyr_3091 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 46 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3091 Response regulator receiver:Transcriptional regulatory protein, C-terminal sig. 46 91
  Pseudomonas aeruginosa MRSN321 DY961_RS01560 cprR;inference=COORDINATES cationic peptide response regulator transcription factor CprR insig. 51 90
  Pseudomonas aeruginosa PA14 IKLFDK_15645 cationic peptide response regulator transcription factor CprR sig. 51 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS34000 cprR;inference=COORDINATES cationic peptide response regulator transcription factor CprR insig. 51 90
  Pseudomonas fluorescens FW300-N2E3 AO353_15065 XRE family transcriptional regulator strong 50 91
  Rhodanobacter sp. FW510-T8 OKGIIK_11110 ompR DNA-binding response regulator strong 47 90
  Rhodanobacter denitrificans MT42 LRK55_RS04005 response regulator transcription factor strong 47 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04235 response regulator transcription factor strong 47 90
  Pseudomonas syringae pv. syringae B728a Psyr_2375 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 46 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2375 Response regulator receiver:Transcriptional regulatory protein, C-terminal insig. 46 93
  Shewanella loihica PV-4 Shew_3317 two component transcriptional regulator (RefSeq) insig. 44 90
o Shewanella oneidensis MR-1 SO4623 DNA-binding response regulator (NCBI ptt file) insig. 44 91
o Shewanella amazonensis SB2B Sama_0146 response regulator receiver protein (RefSeq) insig. 46 90
o Shewanella sp. ANA-3 Shewana3_4007 two component transcriptional regulator (RefSeq) insig. 45 91
  Shewanella oneidensis MR-1 SO4637 DNA-binding response regulator (NCBI ptt file) insig. 42 90
  Synechococcus elongatus PCC 7942 Synpcc7942_1404 two component transcriptional regulator, winged helix family no data 43 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02615 DNA-binding response regulator sig. 41 92
  Herbaspirillum seropedicae SmR1 HSERO_RS12420 transcriptional regulator insig. 45 90
  Lysobacter sp. OAE881 ABIE51_RS04165 response regulator transcription factor insig. 44 91
  Variovorax sp. SCN45 GFF11 Two-component transcriptional response regulator, OmpR family insig. 44 96
  Pseudomonas sp. RS175 PFR28_03578 Transcriptional activator protein CzcR sig. 43 91
  Variovorax sp. SCN45 GFF5812 DNA-binding heavy metal response regulator insig. 44 98
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14010 response regulator transcription factor HprR cofit 41 93
  Pseudomonas fluorescens FW300-N2C3 AO356_17205 transcriptional regulator insig. 43 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5366 DNA-binding heavy metal response regulator insig. 43 90
  Pseudomonas fluorescens SBW25 PFLU_RS04765 heavy metal response regulator transcription factor insig. 42 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04765 heavy metal response regulator transcription factor insig. 42 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01140 Transcriptional activator protein CzcR insig. 43 91
  Pseudomonas fluorescens FW300-N2E3 AO353_15395 transcriptional regulator sig. 43 90
  Burkholderia phytofirmans PsJN BPHYT_RS24495 transcriptional regulator strong 42 91
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1663 DNA-binding heavy metal response regulator insig. 43 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3273 Putative two-component system response regulator YedW insig. 41 90
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3258 DNA-binding heavy metal response regulator insig. 43 90
o Synechocystis sp000284455 PCC 6803 SGL_RS06340 response regulator transcription factor strong 39 89
  Ralstonia solanacearum PSI07 RPSI07_RS02355 DNA-binding response regulator insig. 44 92
  Pseudomonas simiae WCS417 PS417_04690 transcriptional regulator strong 43 90
  Variovorax sp. OAS795 ABID97_RS14620 phosphate regulon transcriptional regulator PhoB insig. 42 90
  Burkholderia phytofirmans PsJN BPHYT_RS25955 transcriptional regulator insig. 45 90
  Rhodanobacter denitrificans MT42 LRK55_RS17160 heavy metal response regulator transcription factor insig. 45 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17690 heavy metal response regulator transcription factor insig. 45 90
  Pseudomonas orientalis W4I3 QF045_RS07685 heavy metal response regulator transcription factor cofit 42 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20860 DNA-binding response regulator insig. 44 92
  Ralstonia solanacearum UW163 UW163_RS21995 DNA-binding response regulator insig. 44 92
  Cupriavidus basilensis FW507-4G11 RR42_RS30960 transcriptional regulator strong 45 90
  Pseudomonas sp. BP01 JOY50_RS19270 heavy metal response regulator transcription factor insig. 42 91
  Rhodanobacter denitrificans MT42 LRK55_RS17060 heavy metal response regulator transcription factor insig. 44 90
  Burkholderia phytofirmans PsJN BPHYT_RS29120 transcriptional regulator insig. 44 90
  Pseudomonas syringae pv. syringae B728a Psyr_4800 Heavy metal response regulator insig. 43 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4800 Heavy metal response regulator insig. 43 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01441 two component heavy metal response transcriptional regulator, winged helix family insig. 43 90
  Agrobacterium fabrum C58 Atu0629 two component response regulator insig. 41 90
o Dechlorosoma suillum PS Dsui_1617 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain no data 46 90
  Pseudomonas sp. DMC3 GFF4407 Transcriptional activator protein CzcR insig. 42 90