| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_04065 | | peptide ABC transporter substrate-binding protein | sig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS04105 | | ABC transporter substrate-binding protein | insig. | 99 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04105 | | ABC transporter substrate-binding protein | insig. | 99 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS07060 | | ABC transporter substrate-binding protein | insig. | 98 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01017 | | Periplasmic dipeptide transport protein | cofit | 93 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05390 | | peptide ABC transporter substrate-binding protein | strong | 84 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00128 | | Periplasmic dipeptide transport protein | insig. | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1123 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | cofit | 80 | 98 |
| o | Pseudomonas sp. DMC3 | GFF5023 | | Periplasmic dipeptide transport protein | cofit | 80 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5054 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | strong | 80 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_07255 | | peptide ABC transporter substrate-binding protein | strong | 79 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3310 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 79 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS04105 | | ABC transporter substrate-binding protein | insig. | 75 | 96 |
| o | Pseudomonas putida KT2440 | PP_0882 | | dipeptide ABC transporter - periplasmic binding protein | insig. | 71 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_4238 | | extracellular solute-binding protein, family 5 | insig. | 71 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4238 | | extracellular solute-binding protein, family 5 | insig. | 71 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS10965 | | ABC transporter substrate-binding protein | insig. | 72 | 96 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS23960 | | ABC transporter substrate-binding protein | insig. | 62 | 96 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_01570 | | Di/tripeptide-binding protein 4 | insig. | 62 | 96 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS56425 | | ABC transporter substrate-binding protein | insig. | 62 | 96 |
| o | Pseudomonas segetis P6 | ACVTMO_RS19255 | | ABC transporter substrate-binding protein | insig. | 58 | 95 |
| o | Pseudomonas sp. S08-1 | OH686_08700 | | Dipeptide ABC transporter, substrate-binding protein DppA | insig. | 58 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23990 | | ABC transporter substrate-binding protein | insig. | 54 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56450 | | ABC transporter substrate-binding protein | insig. | 54 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01595 | | Di/tripeptide-binding protein 2 | insig. | 55 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS09065 | | ABC transporter substrate-binding protein | cofit | 53 | 96 |
| | Pseudomonas segetis P6 | ACVTMO_RS00100 | | ABC transporter substrate-binding protein | insig. | 51 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS12475 | | ABC transporter substrate-binding protein | sig. | 51 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26865 | | putative di/tripeptide-binding protein 5 | strong | 51 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS01460 | | ABC transporter substrate-binding protein | insig. | 51 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_09215 | | peptide ABC transporter substrate-binding protein | cofit | 51 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4378 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | sig. | 51 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49655 | | ABC transporter substrate-binding protein | sig. | 51 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS29440 | | ABC transporter substrate-binding protein | insig. | 51 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29440 | | ABC transporter substrate-binding protein | insig. | 51 | 97 |
| | Pseudomonas sp. DMC3 | GFF402 | | Periplasmic dipeptide transport protein | cofit | 52 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00020 | | Periplasmic dipeptide transport protein | insig. | 50 | 97 |
| | Pseudomonas simiae WCS417 | PS417_27765 | | peptide ABC transporter substrate-binding protein | sig. | 51 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2127 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 50 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_799 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 52 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04411 | | Periplasmic dipeptide transport protein | cofit | 50 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS02115 | | ABC transporter substrate-binding protein | cofit | 50 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_12550 | | peptide ABC transporter substrate-binding protein | sig. | 50 | 96 |
| | Pseudomonas putida KT2440 | PP_5283 | | periplasmic dipeptide transport protein | strong | 53 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01150 | | ABC transporter substrate-binding protein | insig. | 50 | 96 |
| | Pseudomonas sp. S08-1 | OH686_13625 | | ABC transporter, periplasmic substrate-binding protein | insig. | 49 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02265 | | peptide ABC transporter substrate-binding protein | insig. | 49 | 98 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0223 | | extracellular solute-binding protein, family 5 | insig. | 51 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0223 | | extracellular solute-binding protein, family 5 | cofit | 51 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02084 | | dipeptide transport system substrate-binding protein | insig. | 48 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | insig. | 47 | 98 |
| | Pseudomonas sp. S08-1 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | cofit | 50 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS00460 | | ABC transporter substrate-binding protein | cofit | 47 | 100 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56455 | | ABC transporter substrate-binding protein | insig. | 49 | 98 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01600 | | Di/tripeptide-binding protein 1 | insig. | 48 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS21920 | | ABC transporter substrate-binding protein | insig. | 47 | 100 |
| | Dickeya dianthicola 67-19 | HGI48_RS20925 | | ABC transporter substrate-binding protein | cofit | 47 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS19250 | | ABC transporter substrate-binding protein | cofit | 48 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23995 | | ABC transporter substrate-binding protein | insig. | 49 | 96 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF475 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | insig. | 46 | 99 |
| | Escherichia coli ECRC100 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli ECRC101 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli ECRC102 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | cofit | 46 | 99 |
| | Escherichia coli ECRC98 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli ECRC99 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | no data | 46 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS26885 | | ABC transporter substrate-binding protein | sig. | 47 | 99 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_07610 | | Dipeptide-binding protein | insig. | 47 | 99 |
| | Pantoea sp. MT58 | IAI47_18650 | | ABC transporter substrate-binding protein | strong | 46 | 99 |
| | Escherichia coli BL21 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | insig. | 46 | 99 |
| | Escherichia fergusonii Becca | EFB2_00263 | | Periplasmic dipeptide transport protein | insig. | 46 | 99 |
| | Escherichia coli ECOR27 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli ECOR38 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli ECRC62 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | insig. | 46 | 99 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | insig. | 46 | 99 |
| | Escherichia coli BW25113 | b3544 | dppA | dipeptide transporter (NCBI) | sig. | 46 | 99 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15685 | | ABC transporter substrate-binding protein | cofit | 46 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4234 | | extracellular solute-binding protein, family 5 | insig. | 50 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4234 | | extracellular solute-binding protein, family 5 | insig. | 50 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_00190 | | Periplasmic dipeptide transport protein | sig. | 46 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS04120 | | ABC transporter substrate-binding protein | insig. | 47 | 98 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3804 | | ABC-type dipeptide transport system, periplasmic component | cofit | 46 | 99 |
| | Pseudomonas putida KT2440 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | insig. | 47 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00220 | | ABC transporter substrate-binding protein | cofit | 46 | 98 |
| | Rahnella sp. WP5 | EX31_RS05515 | | ABC transporter substrate-binding protein | insig. | 46 | 99 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_10080 | | ABC transporter substrate-binding protein | insig. | 46 | 99 |
| | Erwinia amylovora T8 | OLJFJH_04875 | | ABC transporter substrate-binding protein | insig. | 45 | 99 |
| | Erwinia tracheiphila SCR3 | LU632_RS00265 | | ABC transporter substrate-binding protein | insig. | 46 | 99 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01021 | | Periplasmic dipeptide transport protein | cofit | 47 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07235 | | peptide ABC transporter substrate-binding protein | sig. | 47 | 97 |
| | Pseudomonas orientalis W4I3 | QF045_RS07080 | | ABC transporter substrate-binding protein | cofit | 48 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23975 | | ABC transporter substrate-binding protein | insig. | 47 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56435 | | ABC transporter substrate-binding protein | insig. | 47 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3306 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | strong | 47 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS10980 | | ABC transporter substrate-binding protein | insig. | 46 | 98 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_01580 | | Di/tripeptide-binding protein 3 | strong | 47 | 99 |
| | Pseudomonas sp. RS175 | PFR28_00132 | | Periplasmic dipeptide transport protein | insig. | 47 | 97 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS04125 | | ABC transporter substrate-binding protein | insig. | 47 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS04125 | | ABC transporter substrate-binding protein | insig. | 47 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | cofit | 46 | 100 |