| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF6298 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS04735 | | LysR family transcriptional regulator | insig. | 88 | 100 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_715 | | Transcriptional regulator, LysR family, in glycolate utilization operon | sig. | 79 | 99 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3045 | | Transcriptional regulator, LysR family | insig. | 78 | 99 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 66 | 99 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 66 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 65 | 99 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 65 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 66 | 99 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS11615 | | LysR family transcriptional regulator | sig. | 64 | 99 |
| o | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 61 | 99 |
| o | Ralstonia solanacearum GMI1000 | RS_RS06820 | | LysR family transcriptional regulator | insig. | 64 | 99 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00160 | | LysR family transcriptional regulator | no data | 64 | 99 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS17325 | | LysR family transcriptional regulator | insig. | 64 | 99 |
| o | Ralstonia solanacearum UW163 | UW163_RS13490 | | LysR family transcriptional regulator | no data | 64 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS15205 | | LysR family transcriptional regulator | insig. | 57 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00788 | | transcriptional regulator, LysR family | strong | 49 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_002002 | | DNA-binding transcriptional LysR family regulator | strong | 49 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08840 | | LysR family transcriptional regulator | sig. | 48 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS22530 | | LysR family transcriptional regulator | insig. | 48 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF136 | | Transcriptional regulator, LysR family | no data | 46 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS16435 | | LysR family transcriptional regulator | insig. | 44 | 99 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08655 | | LysR family transcriptional regulator | sig. | 44 | 99 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS03880 | | LysR family transcriptional regulator | insig. | 43 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS19825 | | LysR family transcriptional regulator | insig. | 43 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS08570 | | LysR family transcriptional regulator | insig. | 43 | 99 |
| | Ralstonia solanacearum UW163 | UW163_RS05040 | | LysR family transcriptional regulator | insig. | 43 | 99 |
| o | Pseudomonas stutzeri RCH2 | Psest_1182 | | Transcriptional regulator | strong | 45 | 99 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS12145 | | LysR family transcriptional regulator | insig. | 42 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 39 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 39 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13530 | | LysR family transcriptional regulator | no data | 38 | 96 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 37 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 39 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS04415 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_000975 | | LysR family transcriptional activator of dmlA | insig. | 39 | 98 |
| | Agrobacterium fabrum C58 | Atu4291 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17035 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS18425 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 37 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS21935 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| o | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 37 | 99 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 36 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 35 | 99 |
| o | Azospirillum sp. SherDot2 | MPMX19_04441 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_002082 | | DNA-binding transcriptional LysR family regulator | insig. | 39 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4411 | | Transcriptional regulator, LysR family | no data | 36 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 39 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00866 | | transcriptional regulator, LysR family | no data | 39 | 98 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18640 | | LysR family transcriptional regulator | insig. | 39 | 94 |
| | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 37 | 99 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29485 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 36 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 36 | 96 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10290 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16530 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF373 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 38 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1749 | | Cyn operon transcriptional activator | insig. | 39 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 96 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 96 |
| | Pseudomonas sp. DMC3 | GFF1160 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS22135 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Xanthobacter sp. DMC5 | GFF3690 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_04565 | | HTH-type transcriptional regulator PgrR | insig. | 39 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09225 | | LysR family transcriptional regulator | insig. | 40 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04562 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04237 | | transcriptional regulator, LysR family | insig. | 37 | 97 |
| | Pseudomonas simiae WCS417 | PS417_14590 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26820 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 39 | 96 |
| | Pseudomonas sp. RS175 | PFR28_04672 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 96 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS29215 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_691 | | Transcriptional regulator | insig. | 37 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_003477 | | DNA-binding transcriptional LysR family regulator | insig. | 37 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 36 | 99 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_005907 | | DNA-binding transcriptional LysR family regulator | insig. | 38 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1954 | | Transcriptional regulator | insig. | 38 | 95 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 37 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25010 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_04668 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 97 |
| | Escherichia coli BL21 | ECD_01769 | | transcriptional activator of dmlA | no data | 35 | 97 |
| | Escherichia coli ECOR27 | NOLOHH_17150 | dmlR | DNA-binding transcriptional regulator DmlR | no data | 35 | 97 |
| | Escherichia coli ECOR38 | HEPCGN_05020 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 35 | 97 |
| | Escherichia coli ECRC100 | OKFHMN_26630 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 35 | 97 |
| | Escherichia coli ECRC101 | MCAODC_18780 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 35 | 97 |
| | Escherichia coli ECRC102 | NIAGMN_01435 | dmlR | DNA-binding transcriptional regulator DmlR | cofit | 35 | 97 |
| | Escherichia coli ECRC62 | BNILDI_15935 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 35 | 97 |
| | Escherichia coli ECRC98 | JDDGAC_01205 | dmlR | DNA-binding transcriptional regulator DmlR | insig. | 35 | 97 |
| | Escherichia coli ECRC99 | KEDOAH_01480 | dmlR | DNA-binding transcriptional regulator DmlR | no data | 35 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01934 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 97 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 36 | 97 |