Homologs of PS417_24420 from Pseudomonas simiae WCS417

RNA polymerase sigma70
SEED: FIG006045: Sigma factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 98 100
o Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 70 95
o Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 58 96
o Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 48 92
o Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 37 93
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 40 91
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 39 91
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 35 91
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 37 95
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 39 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 39 90
o Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 38 87
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 39 88
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 35 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 34 95
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 37 86
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 37 92
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 37 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 35 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 33 90
  Pseudomonas sp. SVBP6 COO64_RS04525 RNA polymerase sigma factor insig. 35 92
  Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 34 89
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 38 82
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 34 90
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 38 86
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 37 86
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 35 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 41 77
o Xanthobacter sp. DMC5 GFF2424 putative RNA polymerase sigma factor FecI insig. 35 92
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 36 90
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 33 90
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 34 89
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 36 91
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05630 RNA polymerase sigma-70 factor sig. 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 37 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 37 86
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 33 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 35 92
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 34 94
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 33 89
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 33 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 33 92
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 32 90
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 37 86
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma insig. 34 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 33 94
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 38 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 34 90
  Pseudomonas sp. SVBP6 COO64_RS18805 sigma-70 family RNA polymerase sigma factor insig. 34 87
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 33 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1886 FIG006045: Sigma factor, ECF subfamily insig. 32 90
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 34 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 34 87
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 36 86
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 35 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 33 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 32 86
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 33 92
  Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 35 90
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 34 88
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 32 89
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 35 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 34 88
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 33 88
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 32 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 88
  Pseudomonas sp. BP01 JOY50_RS02515 sigma-70 family RNA polymerase sigma factor insig. 34 87
  Methylophilus sp. DMC18 GFF1862 putative RNA polymerase sigma factor FecI insig. 31 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 91
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 34 88
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 32 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 91
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 32 91
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 36 84
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 33 87
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 33 88
  Variovorax sp. SCN45 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 37 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 91
  Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI insig. 35 90
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 32 88
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 32 90
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Pseudomonas sp. BP01 JOY50_RS18970 sigma-70 family RNA polymerase sigma factor insig. 31 91
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 33 92
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 32 86
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 29 95
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 36 90
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 35 79
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 34 94
  Pseudomonas putida KT2440 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily sig. 31 87
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 33 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 31 87
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 35 87
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 34 87
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 30 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3549 RNA polymerase sigma factor, sigma-70 family insig. 31 92
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 36 89