Homologs of GFF3611 from Sphingobium sp. HT1-2

hypothetical protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3611 hypothetical protein cofit 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3621 FOG: EAL domain sig. 46 98
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 36 62
  Pseudomonas fluorescens FW300-N2C3 AO356_17705 diguanylate cyclase insig. 36 58
  Pseudomonas sp. DMC3 GFF1254 hypothetical protein insig. 35 62
  Pseudomonas sp. SVBP6 COO64_RS17205 EAL domain-containing protein insig. 36 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5465 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 58
  Pseudomonas sp. RS175 PFR28_03484 hypothetical protein strong 35 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 62
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_39 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 63
  Methylophilus sp. DMC18 GFF1518 hypothetical protein cofit 36 64
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 65
  Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 35 65
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 33 62
  Pseudomonas syringae pv. syringae B728a Psyr_4493 PAS:GGDEF insig. 35 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4493 PAS:GGDEF cofit 35 63
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 60
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 36 65
  Pseudomonas segetis P6 MPMX49_03076 hypothetical protein insig. 35 63
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 34 62
  Enterobacter asburiae PDN3 EX28DRAFT_2619 diguanylate cyclase (GGDEF) domain strong 34 60
  Pseudomonas sp. BP01 JOY50_RS24285 EAL domain-containing protein insig. 35 63
  Pseudomonas syringae pv. syringae B728a Psyr_1981 PAS:GGDEF insig. 36 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1981 PAS:GGDEF insig. 36 63
  Acidovorax sp. GW101-3H11 Ac3H11_2218 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 60
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 34 63
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 35 64
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 35 61
  Acidovorax sp. GW101-3H11 Ac3H11_1725 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 35 64
  Pseudomonas sp. SVBP6 COO64_RS05675 EAL domain-containing protein insig. 35 65
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 36 63
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 65
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 33 71
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 66
  Sphingobium sp. HT1-2 GFF714 hypothetical protein cofit 32 77
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 35 62
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 63
  Marinobacter adhaerens HP15 HP15_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 36 58
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 36 62
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 36 62
  Pseudomonas aeruginosa PA14 IKLFDK_10140 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 63
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 36 62
  Pseudomonas segetis P6 MPMX49_03978 hypothetical protein strong 35 56
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 35 58
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 34 63
  Dechlorosoma suillum PS Dsui_2419 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 63
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 33 67
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 36 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 34 65
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 35 57
  Pseudomonas sp. S08-1 OH686_09725 Sensory box/GGDEF family protein cofit 34 61
  Pseudomonas aeruginosa PA14 IKLFDK_02265 cyclic-di-GMP phosphodiesterase BifA insig. 35 59
  Pseudomonas fluorescens FW300-N2E3 AO353_16180 diguanylate cyclase strong 35 60
  Bosea sp. OAE506 ABIE41_RS13785 EAL domain-containing protein insig. 35 67
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 62
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 36 62
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 36 62
  Pseudomonas stutzeri RCH2 Psest_1712 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 34 65
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 34 61
  Herbaspirillum seropedicae SmR1 HSERO_RS13620 diguanylate cyclase strong 33 64
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 63
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 32 63
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 32 63
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 32 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 36 63
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 35 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 35 63
  Pseudomonas putida KT2440 PP_1154 Sensory box protein insig. 34 64
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 34 61
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 33 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 35 65
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 33 63
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 36 63
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 35 61
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 34 64
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 34 63
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 33 63
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 63
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 57
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 34 63
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 66
  Enterobacter sp. TBS_079 MPMX20_04172 putative signaling protein insig. 33 63
  Shewanella sp. ANA-3 Shewana3_0659 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 33 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 34 63
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 33 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4868 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 63
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 34 65
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03279 hypothetical protein cofit 33 60
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 33 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 33 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 33 63
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 33 63
  Desulfovibrio vulgaris Hildenborough JW710 DVU3064 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 38 60
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19820 GGDEF-domain containing protein insig. 35 63
  Ralstonia solanacearum UW163 UW163_RS19355 GGDEF-domain containing protein insig. 35 63
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 34 63