| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Sphingobium sp. HT1-2 | GFF355 | | Transcriptional regulator Swit_0960, LysR family | cofit | 100 | 100 |
| | Rhodopseudomonas palustris CGA009 | TX73_008980 | | LysR family transcriptional regulator | insig. | 33 | 83 |
| o | Xanthobacter sp. DMC5 | GFF22 | | HTH-type transcriptional regulator HdfR | insig. | 38 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS35930 | | LysR family transcriptional regulator | insig. | 31 | 81 |
| o | Azospirillum sp. SherDot2 | MPMX19_04948 | | HTH-type transcriptional regulator GltR | insig. | 33 | 83 |
| o | Pseudomonas sp. BP01 | JOY50_RS05175 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS07550 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07550 | | LysR family transcriptional regulator | strong | 30 | 88 |
| o | Pseudomonas simiae WCS417 | PS417_07465 | | LysR family transcriptional regulator | insig. | 29 | 88 |
| o | Marinobacter adhaerens HP15 | HP15_2680 | | protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR | insig. | 29 | 92 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01626 | | HTH-type transcriptional regulator GltR | cofit | 29 | 88 |
| o | Pseudomonas orientalis W4I3 | QF045_RS10115 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| | Xanthobacter sp. DMC5 | GFF44 | | HTH-type transcriptional regulator GltR | insig. | 29 | 90 |
| o | Sinorhizobium meliloti 1021 | SMa0498 | | LysR family transcriptional regulator | insig. | 28 | 86 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS39080 | | LysR family transcriptional regulator | strong | 29 | 81 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS16795 | | LysR family transcriptional regulator | strong | 29 | 81 |
| o | Pseudomonas sp. RS175 | PFR28_01894 | | HTH-type transcriptional regulator HdfR | insig. | 27 | 86 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_26400 | | LysR family transcriptional regulator | insig. | 26 | 94 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10320 | | LysR family transcriptional regulator | no data | 29 | 81 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1158 | | Cyn operon transcriptional activator | insig. | 26 | 94 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS09175 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_488 | | Cyn operon transcriptional activator | insig. | 26 | 92 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_17985 | | LysR family transcriptional regulator | sig. | 29 | 81 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1155 | | Cyn operon transcriptional activator | strong | 26 | 88 |
| | Pseudomonas sp. RS175 | PFR28_01891 | | HTH-type transcriptional regulator GltR | strong | 26 | 86 |
| | Pseudomonas simiae WCS417 | PS417_19015 | | LysR family transcriptional regulator | insig. | 28 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21070 | | LysR family transcriptional regulator | insig. | 27 | 88 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21070 | | LysR family transcriptional regulator | sig. | 27 | 88 |
| o | Pseudomonas sp. SVBP6 | COO64_RS22255 | | LysR family transcriptional regulator | insig. | 27 | 87 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22130 | | LysR family transcriptional regulator | insig. | 29 | 85 |
| o | Variovorax sp. SCN45 | GFF6721 | | Transcriptional regulator, LysR family | insig. | 30 | 91 |
| o | Pseudomonas sp. DMC3 | GFF2325 | | HTH-type transcriptional regulator GltR | cofit | 29 | 82 |
| | Pseudomonas sp. BP01 | JOY50_RS05240 | | LysR family transcriptional regulator | insig. | 27 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3364 | | Cyn operon transcriptional activator | insig. | 28 | 81 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26385 | | LysR family transcriptional regulator | insig. | 26 | 86 |
| | Variovorax sp. SCN45 | GFF620 | | Transcriptional regulator, LysR family | insig. | 29 | 95 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4480 | | Cyn operon transcriptional activator | insig. | 29 | 81 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS19340 | | LysR family transcriptional regulator | insig. | 27 | 85 |
| | Pseudomonas sp. BP01 | JOY50_RS01460 | | LysR family transcriptional regulator | insig. | 27 | 88 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS10535 | | LysR family transcriptional regulator MumR | insig. | 26 | 82 |
| o | Variovorax sp. OAS795 | ABID97_RS22240 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| o | Pseudomonas putida KT2440 | PP_4579 | | Transcriptional regulator, LysR family | strong | 27 | 88 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05280 | | LysR family transcriptional regulator | insig. | 27 | 85 |
| | Pseudomonas sp. BP01 | JOY50_RS04210 | | LysR family transcriptional regulator | no data | 28 | 88 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_3151 | | transcriptional regulator, LysR family (RefSeq) | insig. | 30 | 83 |
| | Variovorax sp. SCN45 | GFF5955 | | Transcriptional regulator, LysR family | insig. | 28 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4421 | | LysR family transcriptional regulator lrhA | no data | 27 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31250 | | LysR family transcriptional regulator | insig. | 29 | 78 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS09730 | | LysR substrate-binding domain-containing protein | insig. | 29 | 82 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1500 | | LysR family transcriptional regulator lrhA | insig. | 26 | 92 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10960 | | transcriptional regulator LrhA | insig. | 26 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10960 | | transcriptional regulator LrhA | sig. | 26 | 91 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19380 | | LysR family transcriptional regulator | insig. | 26 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02876 | | transcriptional regulator, LysR family | no data | 28 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23985 | | LysR family transcriptional regulator | insig. | 26 | 92 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS27710 | | LysR family transcriptional regulator | insig. | 26 | 93 |
| o | Paraburkholderia graminis OAS925 | ABIE53_005918 | | DNA-binding transcriptional LysR family regulator | insig. | 28 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS08415 | | LysR substrate-binding domain-containing protein | insig. | 30 | 78 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03545 | | LysR family transcriptional regulator | insig. | 30 | 78 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08590 | | LysR family transcriptional regulator | cofit | 30 | 86 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS44435 | | LysR family transcriptional regulator | insig. | 30 | 78 |
| | Acinetobacter baumannii LAC-4 | RR41_RS01910 | | LysR family transcriptional regulator | insig. | 26 | 77 |
| | Pantoea sp. MT58 | IAI47_16445 | | LysR family transcriptional regulator | insig. | 29 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25375 | | LysR family transcriptional regulator | no data | 28 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03809 | | transcriptional regulator, LysR family | insig. | 30 | 83 |
| | Variovorax sp. OAS795 | ABID97_RS27660 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| | Variovorax sp. SCN45 | GFF3832 | | Transcriptional regulator KPN_02830, LysR family | no data | 30 | 77 |
| | Ralstonia solanacearum GMI1000 | RS_RS05435 | | LysR family transcriptional regulator | insig. | 35 | 56 |
| | Alteromonas macleodii MIT1002 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | insig. | 27 | 80 |
| | Agrobacterium fabrum C58 | Atu3355 | | LysR family transcriptional regulator | insig. | 36 | 47 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2180 | | transcriptional regulator, LysR family | sig. | 27 | 90 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2180 | | transcriptional regulator, LysR family | insig. | 27 | 90 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29890 | | LysR family transcriptional regulator | insig. | 32 | 50 |
| o | Shewanella amazonensis SB2B | Sama_1997 | | LysR family transcriptional regulator (RefSeq) | strong | 27 | 85 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_0162 | | Transcriptional regulator | insig. | 26 | 81 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03013 | | transcriptional regulator, LysR family | insig. | 32 | 50 |
| | Paraburkholderia graminis OAS925 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | sig. | 32 | 50 |
| | Pseudomonas sp. RS175 | PFR28_01616 | | HTH-type transcriptional regulator YofA | insig. | 28 | 79 |
| | Dickeya dadantii 3937 | DDA3937_RS05335 | | LysR family transcriptional regulator | insig. | 29 | 58 |
| | Paraburkholderia graminis OAS925 | ABIE53_004438 | | DNA-binding transcriptional LysR family regulator | insig. | 29 | 83 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1768 | | LysR family transcriptional regulator y2377 (Yersinia pestis KIM) | insig. | 28 | 78 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4804 | | Chromosome initiation inhibitor | insig. | 29 | 76 |
| | Rahnella sp. WP5 | EX31_RS00185 | | LysR family transcriptional regulator | insig. | 26 | 78 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2899 | | Probable LysR-family transcriptional regulator | insig. | 31 | 83 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2837 | | HTH-type transcriptional regulator hdfR | insig. | 29 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS18805 | | LysR family transcriptional regulator | insig. | 34 | 56 |
| o | Shewanella oneidensis MR-1 | SO2202 | | transcriptional regulator, LysR family (NCBI ptt file) | strong | 27 | 83 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS04990 | | LysR family transcriptional regulator | insig. | 36 | 46 |
| | Pseudomonas stutzeri RCH2 | Psest_3087 | | Transcriptional regulator | sig. | 30 | 58 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS30590 | | LysR family transcriptional regulator | insig. | 29 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5066 | | Transcriptional regulator, LysR family | no data | 26 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS35310 | | LysR family transcriptional regulator | insig. | 24 | 90 |
| | Azospirillum sp. SherDot2 | MPMX19_05989 | | HTH-type transcriptional regulator HdfR | insig. | 34 | 60 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20425 | | LysR family transcriptional regulator | insig. | 32 | 50 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3101 | | LysR family transcriptional regulator lrhA | insig. | 27 | 92 |
| | Paraburkholderia graminis OAS925 | ABIE53_005204 | | DNA-binding transcriptional LysR family regulator | sig. | 37 | 47 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11285 | | LysR substrate-binding domain-containing protein | insig. | 28 | 95 |
| | Serratia liquefaciens MT49 | IAI46_16295 | | LysR family transcriptional regulator | insig. | 28 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01365 | | transcriptional regulator, LysR family | insig. | 27 | 77 |
| | Pectobacterium carotovorum WPP14 | HER17_RS19795 | | LysR family transcriptional regulator | insig. | 26 | 97 |