Homologs of GFF2942 from Xanthobacter sp. DMC5

putative HTH-type transcriptional regulator YfiR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2942 putative HTH-type transcriptional regulator YfiR insig. 100 100
o Variovorax sp. SCN45 GFF4670 Transcriptional regulator, AcrR family sig. 35 89
o Pseudomonas sp. SVBP6 COO64_RS08830 TetR/AcrR family transcriptional regulator insig. 35 91
  Bosea sp. OAE506 ABIE41_RS05720 TetR/AcrR family transcriptional regulator insig. 36 86
o Caulobacter crescentus NA1000 CCNA_00852 TetR family transcriptional regulator strong 34 95
o Caulobacter crescentus NA1000 Δfur CCNA_00852 TetR family transcriptional regulator cofit 34 95
  Escherichia coli ECOR27 NOLOHH_18120 uidR DNA-binding transcriptional regulator UidR insig. 33 74
  Escherichia coli ECRC62 BNILDI_16910 uidR DNA-binding transcriptional regulator UidR cofit 33 74
  Escherichia coli BL21 ECD_01587 transcriptional repressor no data 33 74
  Escherichia fergusonii Becca EFB2_02374 hypothetical protein insig. 33 74
  Escherichia coli ECOR38 HEPCGN_05990 uidR DNA-binding transcriptional regulator UidR insig. 33 74
  Escherichia coli ECRC100 OKFHMN_27605 uidR DNA-binding transcriptional regulator UidR cofit 33 74
  Escherichia coli ECRC101 MCAODC_17805 uidR DNA-binding transcriptional regulator UidR insig. 33 74
  Escherichia coli ECRC102 NIAGMN_00470 uidR DNA-binding transcriptional regulator UidR no data 33 74
  Escherichia coli ECRC98 JDDGAC_02195 uidR DNA-binding transcriptional regulator UidR insig. 33 74
  Escherichia coli ECRC99 KEDOAH_00500 uidR DNA-binding transcriptional regulator UidR no data 33 74
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02108 hypothetical protein insig. 33 74
  Escherichia coli Nissle 1917 ECOLIN_RS09030 DNA-binding transcriptional regulator UidR no data 33 74
  Escherichia coli BW25113 b1618 uidR DNA-binding transcriptional repressor (NCBI) sig. 33 74
o Methylophilus sp. DMC18 GFF2595 putative HTH-type transcriptional regulator YxaF cofit 29 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19200 TetR/AcrR family transcriptional regulator strong 35 64
  Azospirillum brasilense Sp245 AZOBR_RS05685 TetR family transcriptional regulator insig. 35 78
  Escherichia fergusonii Becca EFB2_02635 HTH-type transcriptional regulator BetI insig. 40 50
  Escherichia coli ECOR38 HEPCGN_25695 acrR TetR family transcriptional regulator insig. 40 50
  Escherichia coli Nissle 1917 ECOLIN_RS07780 TetR/AcrR family transcriptional regulator insig. 40 50
  Escherichia coli ECRC100 OKFHMN_02505 acrR TetR family transcriptional regulator cofit 40 50
  Escherichia coli ECRC101 MCAODC_15765 acrR TetR family transcriptional regulator insig. 40 50
  Escherichia coli ECRC102 NIAGMN_26675 acrR TetR family transcriptional regulator insig. 40 50
  Escherichia coli ECRC98 JDDGAC_05050 acrR TetR family transcriptional regulator insig. 40 50
  Escherichia coli ECRC99 KEDOAH_26260 acrR TetR family transcriptional regulator no data 40 50
  Klebsiella pneumoniae MKP103 KDGMDA_18545 TetR/AcrR family transcriptional regulator insig. 42 52
  Phaeobacter inhibens DSM 17395 PGA1_262p01280 transcriptional regulator, TetR family insig. 31 74
  Bosea sp. OAE506 ABIE41_RS08455 TetR/AcrR family transcriptional regulator insig. 44 36
  Dickeya dadantii 3937 DDA3937_RS14130 TetR/AcrR family transcriptional regulator insig. 48 28
  Methanococcus maripaludis S2 MMP_RS04125 TetR/AcrR family transcriptional regulator sig. 47 25
  Pseudomonas aeruginosa MRSN321 DY961_RS17735 TetR/AcrR family transcriptional regulator no data 43 28
  Pseudomonas aeruginosa PUPa3 DQ20_RS39960 TetR/AcrR family transcriptional regulator strong 43 28
  Klebsiella michiganensis M5al BWI76_RS10920 putative TetR family transcriptional regulator sig. 42 49
  Pseudomonas syringae pv. syringae B728a Psyr_3036 transcriptional regulator, TetR family insig. 38 39
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3036 transcriptional regulator, TetR family insig. 38 39
  Methanococcus maripaludis JJ MMJJ_RS00995 TetR/AcrR family transcriptional regulator strong 47 25
  Methanococcus maripaludis S2 MMP_RS04165 TetR/AcrR family transcriptional regulator strong 47 25
  Pseudomonas aeruginosa PA14 IKLFDK_11140 TetR family transcriptional regulator no data 43 28
  Serratia liquefaciens MT49 IAI46_05880 TetR/AcrR family transcriptional regulator insig. 33 60
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2749 transcriptional regulator, TetR family insig. 29 72
  Sinorhizobium meliloti 1021 SMc03169 transcriptional regulator no data 45 34
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5760 Transcriptional regulator, TetR family insig. 30 87
  Acinetobacter baumannii LAC-4 RR41_RS13370 TetR/AcrR family transcriptional regulator insig. 29 80
  Rhodopseudomonas palustris CGA009 TX73_018370 TetR/AcrR family transcriptional regulator sig. 48 31
  Pseudomonas syringae pv. syringae B728a Psyr_3154 transcriptional regulator, TetR family insig. 28 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3154 transcriptional regulator, TetR family insig. 28 89
  Rhodopseudomonas palustris CGA009 TX73_019555 helix-turn-helix domain containing protein insig. 39 33
  Rhizobium sp. OAE497 ABIE40_RS16840 TetR/AcrR family transcriptional regulator strong 47 26
  Sinorhizobium meliloti 1021 SMa2387 TetR family transcriptional regulator insig. 29 69
  Dickeya dianthicola 67-19 HGI48_RS14130 TetR/AcrR family transcriptional regulator no data 47 26
  Dickeya dianthicola ME23 DZA65_RS14790 TetR/AcrR family transcriptional regulator insig. 47 26
  Dickeya dadantii 3937 DDA3937_RS10775 TetR/AcrR family transcriptional regulator cofit 29 89
  Xanthobacter sp. DMC5 GFF4153 hypothetical protein insig. 31 63
  Phaeobacter inhibens DSM 17395 PGA1_c12830 transcriptional regulator, TetR family strong 30 88
  Mycobacterium tuberculosis H37Rv Rv0144 Probable transcriptional regulatory protein (possibly TetR-family) insig. 28 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09915 TetR/AcrR family transcriptional regulator insig. 28 81
  Agrobacterium fabrum C58 Atu4477 TetR family transcriptional regulator strong 44 35
  Rahnella sp. WP5 EX31_RS23040 helix-turn-helix transcriptional regulator insig. 44 24
  Cupriavidus basilensis FW507-4G11 RR42_RS28490 hypothetical protein insig. 30 49
o Ralstonia sp. UNC404CL21Col ABZR87_RS16390 TetR/AcrR family transcriptional regulator insig. 26 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3749.1 hypothetical protein sig. 43 31
  Pseudomonas simiae WCS417 PS417_05900 TetR family transcriptional regulator insig. 43 31
  Variovorax sp. OAS795 ABID97_RS03495 TetR family transcriptional regulator strong 41 35
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19810 TetR/AcrR family transcriptional regulator sig. 44 29
  Ralstonia solanacearum UW163 UW163_RS19365 TetR/AcrR family transcriptional regulator insig. 44 29
  Mycobacterium tuberculosis H37Rv Rv3574 Transcriptional regulatory protein KstR (probably TetR-family) no data 33 61
  Ralstonia solanacearum PSI07 RPSI07_RS03375 TetR/AcrR family transcriptional regulator strong 44 29
  Enterobacter sp. TBS_079 MPMX20_00059 HTH-type transcriptional regulator BetI sig. 36 53
  Ralstonia solanacearum GMI1000 RS_RS21015 TetR/AcrR family transcriptional regulator sig. 44 29
  Caulobacter crescentus NA1000 CCNA_03453 AcrR-family transcriptional regulator strong 40 30
  Caulobacter crescentus NA1000 Δfur CCNA_03453 AcrR-family transcriptional regulator cofit 40 30
  Mycobacterium tuberculosis H37Rv Rv2506 Probable transcriptional regulatory protein (probably TetR-family) strong 37 41
  Pseudomonas aeruginosa MRSN321 DY961_RS10720 TetR family transcriptional regulator C-terminal domain-containing protein insig. 49 23
  Pseudomonas aeruginosa PUPa3 DQ20_RS51340 TetR family transcriptional regulator C-terminal domain-containing protein sig. 49 23
  Xanthobacter sp. DMC5 GFF2175 hypothetical protein insig. 41 35
  Mycobacterium tuberculosis H37Rv Rv1534 Probable transcriptional regulator insig. 40 27
  Dickeya dianthicola 67-19 HGI48_RS10740 TetR/AcrR family transcriptional regulator strong 29 85
  Shewanella loihica PV-4 Shew_3104 TetR family transcriptional regulator (RefSeq) sig. 39 28
  Serratia liquefaciens MT49 IAI46_17420 TetR/AcrR family transcriptional regulator insig. 32 39
  Vibrio cholerae E7946 ATCC 55056 CSW01_19105 TetR/AcrR family transcriptional regulator insig. 26 69
  Xanthobacter sp. DMC5 GFF4618 HTH-type transcriptional regulator AcrR insig. 45 26
  Pseudomonas segetis P6 ACVTMO_RS08080 TetR/AcrR family transcriptional regulator sig. 39 34
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07140 TetR/AcrR family transcriptional regulator no data 38 32
  Variovorax sp. OAS795 ABID97_RS27795 TetR/AcrR family transcriptional regulator insig. 33 54
  Enterobacter sp. TBS_079 MPMX20_02479 Transposon Tn10 TetC protein insig. 38 29
  Ralstonia solanacearum PSI07 RPSI07_RS18790 TetR/AcrR family transcriptional regulator insig. 37 29
  Lysobacter sp. OAE881 ABIE51_RS06290 TetR/AcrR family transcriptional regulator insig. 30 61
  Lysobacter sp. OAE881 ABIE51_RS15490 TetR/AcrR family transcriptional regulator insig. 28 70
  Acidovorax sp. GW101-3H11 Ac3H11_2224 Transcriptional regulator, TetR family insig. 27 78
  Pseudomonas aeruginosa PA14 IKLFDK_28615 TetR family transcriptional regulator sig. 47 23
  Azospirillum sp. SherDot2 MPMX19_01839 HTH-type transcriptional regulator BetI insig. 43 28
  Shewanella oneidensis MR-1 SO3684 transcriptional regulator, TetR family (NCBI ptt file) sig. 37 28
  Enterobacter asburiae PDN3 EX28DRAFT_3932 transcriptional regulator, TetR family insig. 36 50
  Pseudomonas sp. S08-1 OH686_06750 Transcriptional regulator, AcrR family cofit 31 60
  Sphingobium sp. HT1-2 GFF3949 Transcriptional regulator, AcrR family cofit 31 50