Homologs of GFF2907 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

HTH-type transcriptional regulator hdfR
SEED: HTH-type transcriptional regulator hdfR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2907 HTH-type transcriptional regulator hdfR strong 100 100
o Escherichia coli ECOR27 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR strong 87 100
o Escherichia coli ECRC100 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR cofit 87 100
o Escherichia coli ECRC101 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR cofit 87 100
o Escherichia coli ECRC102 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR cofit 87 100
o Escherichia coli ECRC62 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR cofit 87 100
o Escherichia coli ECRC98 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR strong 87 100
o Escherichia coli ECRC99 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR no data 87 100
o Escherichia coli BL21 ECD_03642 flhDC operon transcriptional repressor strong 87 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04288 HTH-type transcriptional regulator HdfR strong 87 100
o Escherichia coli BW25113 b4480 hdfR transcriptional regulator HdfR (NCBI) strong 87 100
o Escherichia coli ECOR38 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR cofit 87 100
o Escherichia fergusonii Becca EFB2_04871 HTH-type transcriptional regulator HdfR strong 87 100
o Escherichia coli Nissle 1917 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR strong 87 100
o Klebsiella pneumoniae MKP103 KDGMDA_09455 HTH-type transcriptional regulator HdfR sig. 84 99
o Klebsiella michiganensis M5al BWI76_RS00940 transcriptional regulator HdfR strong 84 99
o Enterobacter sp. TBS_079 MPMX20_04505 HTH-type transcriptional regulator HdfR strong 83 99
o Enterobacter asburiae PDN3 EX28DRAFT_4436 Transcriptional regulator strong 83 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20965 HTH-type transcriptional regulator HdfR strong 64 100
o Pantoea sp. MT58 IAI47_01000 HTH-type transcriptional regulator HdfR strong 64 100
o Erwinia amylovora T8 OLJFJH_06200 HTH-type transcriptional regulator HdfR strong 65 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_09295 hdfR HTH-type transcriptional regulator HdfR strong 65 99
o Serratia liquefaciens MT49 IAI46_24385 HTH-type transcriptional regulator HdfR insig. 64 99
o Erwinia tracheiphila SCR3 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR strong 64 99
o Pectobacterium carotovorum WPP14 HER17_RS01040 HTH-type transcriptional regulator HdfR sig. 64 99
o Dickeya dadantii 3937 DDA3937_RS20190 HTH-type transcriptional regulator HdfR insig. 64 99
o Dickeya dianthicola 67-19 HGI48_RS20335 HTH-type transcriptional regulator HdfR strong 64 99
o Dickeya dianthicola ME23 DZA65_RS21375 HTH-type transcriptional regulator HdfR cofit 64 99
o Rahnella sp. WP5 EX31_RS14970 HTH-type transcriptional regulator HdfR insig. 64 99
o Shewanella oneidensis MR-1 SO2202 transcriptional regulator, LysR family (NCBI ptt file) strong 40 93
o Shewanella sp. ANA-3 Shewana3_2403 LysR family transcriptional regulator (RefSeq) strong 40 93
o Shewanella amazonensis SB2B Sama_1997 LysR family transcriptional regulator (RefSeq) strong 37 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_19195 LysR family transcriptional regulator insig. 35 97
o Shewanella loihica PV-4 Shew_2897 LysR family transcriptional regulator (RefSeq) strong 32 97
o Alteromonas macleodii MIT1002 MIT1002_02368 HTH-type transcriptional activator AllS cofit 41 68
o Pseudomonas aeruginosa MRSN321 DY961_RS21010 LysR family transcriptional regulator insig. 31 92
o Pseudomonas aeruginosa PUPa3 DQ20_RS55080 LysR family transcriptional regulator insig. 31 92
o Pseudomonas aeruginosa PA14 IKLFDK_09025 LysR family transcriptional regulator insig. 31 92
o Magnetospirillum magneticum AMB-1 AMB_RS21960 LysR family transcriptional regulator insig. 29 92
o Pseudomonas sp. DMC3 GFF3699 HTH-type transcriptional regulator HdfR insig. 27 98
o Dinoroseobacter shibae DFL-12 Dshi_2990 transcriptional regulator, LysR family (RefSeq) insig. 29 93
o Variovorax sp. OAS795 ABID97_RS24430 LysR family transcriptional regulator insig. 31 94
o Pseudomonas stutzeri RCH2 Psest_0802 Transcriptional regulator sig. 31 95
o Sinorhizobium meliloti 1021 SMc02596 transcriptional regulator insig. 29 95
o Pseudomonas orientalis W4I3 QF045_RS19205 LysR family transcriptional regulator insig. 29 95
o Pseudomonas fluorescens SBW25 PFLU_RS19485 LysR family transcriptional regulator insig. 29 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19485 LysR family transcriptional regulator insig. 29 95
o Pseudomonas simiae WCS417 PS417_17700 LysR family transcriptional regulator insig. 29 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03820 HTH-type transcriptional regulator HdfR cofit 28 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2837 HTH-type transcriptional regulator hdfR insig. 27 99
o Pseudomonas fluorescens FW300-N2E3 AO353_22745 LysR family transcriptional regulator sig. 27 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR sig. 28 95
o Pseudomonas fluorescens FW300-N2C3 AO356_00585 LysR family transcriptional regulator insig. 28 95
o Azospirillum sp. SherDot2 MPMX19_03737 HTH-type transcriptional regulator HdfR insig. 29 94
o Pseudomonas sp. SVBP6 COO64_RS07955 LysR family transcriptional regulator insig. 26 95
o Pseudomonas sp. RS175 PFR28_01360 HTH-type transcriptional regulator HdfR insig. 27 95
o Pseudomonas sp. BP01 JOY50_RS10870 LysR family transcriptional regulator insig. 25 95
o Pseudomonas putida KT2440 PP_2350 LysR family transcriptional regulator sig. 25 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1155 Cyn operon transcriptional activator strong 30 60
  Pseudomonas fluorescens FW300-N2C3 AO356_26385 LysR family transcriptional regulator insig. 30 60
  Erwinia amylovora T8 OLJFJH_11405 transcriptional regulator LrhA no data 33 62
  Pseudomonas aeruginosa PA14 IKLFDK_10320 LysR family transcriptional regulator no data 31 60
  Pseudomonas aeruginosa MRSN321 DY961_RS16795 LysR family transcriptional regulator strong 30 70
  Pseudomonas sp. RS175 PFR28_01891 HTH-type transcriptional regulator GltR strong 29 60
  Pseudomonas aeruginosa PUPa3 DQ20_RS39080 LysR family transcriptional regulator strong 31 60
  Sinorhizobium meliloti 1021 SMc01664 transcriptional regulator insig. 27 90
  Pseudomonas fluorescens FW300-N2E3 AO353_28450 LysR family transcriptional regulator insig. 36 52
  Marinobacter adhaerens HP15 HP15_1835 transcriptional regulator LysR family protein sig. 33 55
  Erwinia tracheiphila SCR3 LU632_RS07960 lrhA transcriptional regulator LrhA no data 31 62
  Rhizobium sp. OAE497 ABIE40_RS11195 LysR family transcriptional regulator insig. 32 54
  Marinobacter adhaerens HP15 HP15_2680 protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR insig. 33 60
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_18040 lrhA transcriptional regulator LrhA strong 30 62
  Pseudomonas stutzeri RCH2 Psest_3087 Transcriptional regulator sig. 30 53
  Burkholderia phytofirmans PsJN BPHYT_RS13975 LysR family transcriptional regulator insig. 37 51
  Sinorhizobium meliloti 1021 SMa0498 LysR family transcriptional regulator insig. 32 56
  Cupriavidus basilensis FW507-4G11 RR42_RS32975 LysR family transcriptional regulator insig. 31 56
  Pseudomonas fluorescens FW300-N2E3 AO353_17985 LysR family transcriptional regulator sig. 31 54
  Burkholderia phytofirmans PsJN BPHYT_RS07470 LysR family transcriptional regulator no data 30 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4337 Transcriptional regulator insig. 34 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3364 Cyn operon transcriptional activator insig. 32 54
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4480 Cyn operon transcriptional activator insig. 31 54
  Pseudomonas sp. S08-1 OH686_10780 Transcriptional regulator, LysR family insig. 30 68
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12590 LysR family transcriptional regulator sig. 40 39
  Pseudomonas fluorescens SBW25 PFLU_RS10960 transcriptional regulator LrhA insig. 31 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10960 transcriptional regulator LrhA sig. 31 56
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02200 HTH-type transcriptional regulator CynR cofit 27 89
  Sinorhizobium meliloti 1021 SMa1736 LysR family transcriptional regulator insig. 23 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1158 Cyn operon transcriptional activator insig. 29 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04446 transcriptional regulator, LysR family insig. 36 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS32870 LysR family transcriptional regulator insig. 34 53
  Pseudomonas orientalis W4I3 QF045_RS10115 LysR family transcriptional regulator insig. 33 62
  Paraburkholderia graminis OAS925 ABIE53_004884 DNA-binding transcriptional LysR family regulator insig. 32 52
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2192 Cys regulon transcriptional activator CysB insig. 30 53
  Paraburkholderia sabiae LMG 24235 QEN71_RS23685 LysR substrate-binding domain-containing protein insig. 32 54
  Pseudomonas simiae WCS417 PS417_07465 LysR family transcriptional regulator insig. 30 62
  Fusobacterium nucleatum SB010 HUW76_07535 LysR family transcriptional regulator cofit 32 53
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01626 HTH-type transcriptional regulator GltR cofit 31 57
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03715 transcriptional regulator, LysR family no data 41 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS21430 LysR substrate-binding domain-containing protein no data 40 44
  Xanthobacter sp. DMC5 GFF44 HTH-type transcriptional regulator GltR insig. 35 52