| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas stutzeri RCH2 | Psest_2179 | | DNA ligase D | insig. | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_26950 | | ATP-dependent DNA ligase | insig. | 63 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_02106 | | Multifunctional non-homologous end joining protein LigD | insig. | 62 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1216 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 63 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4314 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 62 | 100 |
| o | Pseudomonas sp. DMC3 | GFF1659 | | Multifunctional non-homologous end joining protein LigD | cofit | 62 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS24640 | ligD | DNA ligase D | insig. | 62 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS26485 | ligD | DNA ligase D | insig. | 60 | 100 |
| o | Pseudomonas putida KT2440 | PP_3260 | | DNA ligase D | insig. | 60 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS16935 | ligD;go_process=double-strand | DNA ligase D | insig. | 59 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_10445 | | DNA ligase D | sig. | 59 | 99 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS39205 | ligD;go_process=double-strand | DNA ligase D | insig. | 59 | 99 |
| o | Pseudomonas orientalis W4I3 | QF045_RS16850 | | DNA ligase D | insig. | 60 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03237 | | Multifunctional non-homologous end joining protein LigD | cofit | 59 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS14185 | | DNA ligase D | insig. | 59 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14185 | | DNA ligase D | insig. | 59 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_13125 | | ATP-dependent DNA ligase | insig. | 58 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_01425 | | DNA ligase D | cofit | 57 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS08115 | | DNA ligase D | insig. | 56 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | insig. | 58 | 99 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3245 | | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module | insig. | 58 | 99 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS21105 | | DNA ligase D | insig. | 55 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS22145 | | DNA ligase D | insig. | 53 | 99 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002080 | | bifunctional non-homologous end joining protein LigD | insig. | 53 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS09215 | | ATP-dependent DNA ligase | insig. | 52 | 99 |
| o | Variovorax sp. SCN45 | GFF6242 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 52 | 99 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF111 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 48 | 99 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS37085 | | ATP-dependent DNA ligase | insig. | 47 | 99 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS11360 | | DNA ligase | insig. | 46 | 99 |
| | Pseudomonas sp. RS175 | PFR28_01701 | | Multifunctional non-homologous end joining protein LigD | insig. | 55 | 73 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27730 | | ATP-dependent DNA ligase | insig. | 53 | 73 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_797 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 53 | 73 |
| | Paraburkholderia graminis OAS925 | ABIE53_000212 | | bifunctional non-homologous end joining protein LigD | insig. | 51 | 76 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06196 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 51 | 73 |
| o | Rhizobium sp. OAE497 | ABIE40_RS26435 | | DNA ligase D | insig. | 43 | 99 |
| o | Xanthobacter sp. DMC5 | GFF242 | | Multifunctional non-homologous end joining protein LigD | insig. | 42 | 98 |
| o | Sinorhizobium meliloti 1021 | SMc03959 | | hypothetical protein | insig. | 42 | 99 |
| o | Bosea sp. OAE506 | ABIE41_RS04575 | | DNA ligase D | insig. | 43 | 94 |
| o | Agrobacterium fabrum C58 | Atu4632 | | ATP-dependent DNA ligase | insig. | 43 | 91 |
| | Agrobacterium fabrum C58 | Atu5055 | | ATP-dependent DNA ligase | insig. | 39 | 99 |
| o | Sphingobium sp. HT1-2 | GFF5134 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | cofit | 41 | 96 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS02935 | | DNA ligase D | insig. | 40 | 98 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3858 | | DNA ligase D | insig. | 41 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00864 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 52 | 63 |
| | Rhizobium sp. OAE497 | ABIE40_RS29525 | | DNA ligase D | insig. | 39 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS06605 | | DNA ligase D | insig. | 39 | 99 |
| o | Lysobacter sp. OAE881 | ABIE51_RS12760 | | DNA ligase D | insig. | 38 | 99 |
| | Rhizobium sp. OAE497 | ABIE40_RS28460 | | DNA ligase D | insig. | 37 | 99 |
| o | Rhodopseudomonas palustris CGA009 | TX73_018915 | | DNA ligase D | insig. | 38 | 97 |
| o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10580 | | DNA ligase D | insig. | 38 | 100 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15285 | | DNA ligase D | insig. | 35 | 97 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06915 | | DNA ligase D | insig. | 35 | 97 |
| | Sinorhizobium meliloti 1021 | SM_b20685 | | hypothetical protein | insig. | 38 | 98 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2247.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 36 | 99 |
| | Sinorhizobium meliloti 1021 | SMa0414 | | hypothetical protein | insig. | 42 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00864 | | ATP-dependent DNA ligase LigD phosphoesterase module/ATP-dependent DNA ligase LigD polymerase module | insig. | 58 | 36 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20470 | | DNA ligase D | insig. | 34 | 70 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.140.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 39 | 63 |
| | Pseudomonas stutzeri RCH2 | Psest_2150 | | DNA polymerase LigD, polymerase domain | insig. | 53 | 34 |
| | Sinorhizobium meliloti 1021 | SM_b21044 | | ATP-dependent DNA ligase | insig. | 33 | 68 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS09920 | | non-homologous end-joining DNA ligase | insig. | 37 | 41 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01036 | | DNA ligase D, ligase domain-containing protein | no data | 45 | 33 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.140.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | insig. | 39 | 35 |
| | Lysobacter sp. OAE881 | ABIE51_RS12790 | | non-homologous end-joining DNA ligase | insig. | 39 | 33 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01670 | | DNA polymerase domain-containing protein | insig. | 40 | 33 |
| | Bosea sp. OAE506 | ABIE41_RS06590 | | non-homologous end-joining DNA ligase | insig. | 39 | 36 |
| | Rhizobium sp. OAE497 | ABIE40_RS27965 | | non-homologous end-joining DNA ligase | insig. | 40 | 35 |
| | Agrobacterium fabrum C58 | Atu5097 | | ATP-dependent DNA ligase | insig. | 36 | 35 |
| | Agrobacterium fabrum C58 | Atu6090 | | ATP-dependent DNA ligase | insig. | 37 | 35 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01037 | | DNA ligase D, 3'-phosphoesterase domain-containing protein | insig. | 63 | 18 |
| | Agrobacterium fabrum C58 | Atu5051 | | ATP-dependent DNA ligase | insig. | 37 | 36 |
| | Mycobacterium tuberculosis H37Rv | Rv0938 | | ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) | insig. | 39 | 36 |
| | Sinorhizobium meliloti 1021 | SMa0424 | | ATP-dependent DNA ligase | insig. | 37 | 36 |
| | Sphingobium sp. HT1-2 | GFF2020 | | ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD | cofit | 49 | 21 |
| | Sinorhizobium meliloti 1021 | SM_b20912 | | ATP-dependent DNA ligase | insig. | 36 | 35 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04131 | | DNA ligase D, 3'-phosphoesterase domain protein | strong | 48 | 18 |
| | Mycobacterium tuberculosis H37Rv | Rv0938 | | ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) | insig. | 44 | 20 |
| | Mycobacterium tuberculosis H37Rv | Rv3730c | | Conserved hypothetical protein | insig. | 34 | 35 |
| | Mycobacterium tuberculosis H37Rv | Rv0269c | | Conserved hypothetical protein | insig. | 30 | 34 |
| | Mycobacterium tuberculosis H37Rv | Rv0938 | | ATP dependent DNA ligase LigD (ATP dependent polydeoxyribonucleotide synthase) (thermostable DNA ligase) (ATP dependent polynucleotide ligase) (sealase) (DNA repair enzyme) (DNA joinase) | insig. | 30 | 29 |
| | Sinorhizobium meliloti 1021 | SMa0417 | | hypothetical protein | insig. | 39 | 16 |
| | Variovorax sp. OAS795 | ABID97_RS09860 | | RNA ligase family protein | insig. | 38 | 20 |
| | Mycobacterium tuberculosis H37Rv | Rv3731 | | Possible ATP-dependent DNA ligase LigC (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) | insig. | 28 | 37 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS43605 | | DNA ligase | insig. | 30 | 22 |
| | Sphingobium sp. HT1-2 | GFF105 | | ATP-dependent DNA ligase (EC 6.5.1.1) LigC | cofit | 29 | 35 |
| | Lysobacter sp. OAE881 | ABIE51_RS03755 | | ATP-dependent DNA ligase | insig. | 31 | 27 |
| | Phaeobacter inhibens DSM 17395 | PGA1_262p00500 | | putative ATP dependent DNA ligase | insig. | 27 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19200 | | hypothetical protein | insig. | 44 | 11 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04120 | | cisplatin damage response ATP-dependent DNA ligase | insig. | 28 | 35 |
| | Mycobacterium tuberculosis H37Rv | Rv3062 | | Probable ATP-dependent DNA ligase LigB (polydeoxyribonucleotide synthase [ATP]) (polynucleotide ligase [ATP]) (sealase) (DNA repair protein) (DNA joinase) | insig. | 26 | 34 |
| | Rhizobium sp. OAE497 | ABIE40_RS29190 | | ATP-dependent DNA ligase | insig. | 28 | 33 |
| | Caulobacter crescentus NA1000 | CCNA_03725 | | ATP-dependent DNA ligase | cofit | 28 | 33 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03725 | | ATP-dependent DNA ligase | cofit | 28 | 33 |
| | Methanococcus maripaludis S2 | MMP_RS05025 | | ATP-dependent DNA ligase | no data | 25 | 36 |
| | Rhizobium sp. OAE497 | ABIE40_RS28530 | | ATP-dependent DNA ligase | insig. | 25 | 33 |
| | Alteromonas macleodii MIT1002 | MIT1002_03768 | | Putative DNA ligase-like protein/MT0965 | insig. | 25 | 34 |
| | Sinorhizobium meliloti 1021 | SM_b20008 | | ATP-dependent DNA ligase | insig. | 27 | 37 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3656.1 | | ATP-dependent DNA ligase (EC 6.5.1.1) LigC | insig. | 28 | 27 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09960 | | ATP-dependent DNA ligase | insig. | 27 | 33 |
| | Azospirillum sp. SherDot2 | MPMX19_02215 | | DNA ligase | insig. | 27 | 33 |