Homologs of CA265_RS21565 from Pedobacter sp. GW460-11-11-14-LB5

cold-shock protein
SEED: Cold shock protein CspG
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS21565 cold-shock protein insig. 100 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23045 cold-shock protein insig. 77 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS06310 cold-shock protein insig. 77 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15100 cold-shock protein insig. 73 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11070 cold-shock protein no data 70 100
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16470 cold-shock protein no data 73 98
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12665 cold-shock protein strong 71 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20000 cold-shock protein insig. 63 100
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03615 cold-shock protein insig. 66 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11580 cold-shock protein no data 64 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04475 cold-shock protein insig. 66 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3729 Cold shock proteins no data 58 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4666 Cold shock proteins insig. 56 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03605 DNA-binding protein insig. 51 100
  Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 45 100
  Rahnella sp. WP5 EX31_RS10935 transcription antiterminator/RNA stability regulator CspE cofit 45 100
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24050 DNA-binding protein insig. 52 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18670 cold-shock protein strong 52 97
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06265 cold-shock protein insig. 50 100
  Cupriavidus basilensis FW507-4G11 RR42_RS14275 cold-shock protein no data 46 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS39145 cold-shock protein no data 45 100
  Serratia liquefaciens MT49 IAI46_16260 transcription antiterminator/RNA stability regulator CspE no data 45 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15470 cold-shock protein insig. 45 100
  Lysobacter sp. OAE881 ABIE51_RS13800 cold-shock protein strong 42 100
  Rhodospirillum rubrum S1H Rru_A1914 Cold-shock DNA-binding domain protein (NCBI) insig. 45 98
  Rhodospirillum rubrum S1H Rru_A1521 Cold-shock DNA-binding domain protein (NCBI) no data 44 100
  Mycobacterium tuberculosis H37Rv Rv3648c Probable cold shock protein A CspA no data 42 100
  Rhizobium sp. OAE497 ABIE40_RS19865 cold-shock protein sig. 55 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 45 100
  Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 45 100
  Burkholderia phytofirmans PsJN BPHYT_RS17545 cold-shock protein sig. 45 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05686 cold-shock DNA-binding protein family no data 45 100
  Paraburkholderia graminis OAS925 ABIE53_003669 CspA family cold shock protein strong 45 100
o Azospirillum sp. SherDot2 MPMX19_02734 Cold shock-like protein CspE no data 44 100
  Burkholderia phytofirmans PsJN BPHYT_RS33480 cold-shock protein no data 43 100
  Rhodopseudomonas palustris CGA009 TX73_015795 cold-shock protein insig. 39 98
  Cupriavidus basilensis FW507-4G11 RR42_RS37535 cold-shock protein no data 43 100
  Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 42 100
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 42 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 45 100
  Serratia liquefaciens MT49 IAI46_14845 transcription antiterminator/RNA stability regulator CspE no data 43 97
  Rahnella sp. WP5 EX31_RS24665 transcription antiterminator/RNA stability regulator CspE insig. 43 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09515 cold-shock protein no data 48 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS41860 cold-shock protein no data 45 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS43010 cold-shock protein insig. 45 100
  Azospirillum brasilense Sp245 AZOBR_RS01055 cold-shock protein no data 44 100
  Alteromonas macleodii MIT1002 MIT1002_03628 Cold shock-like protein CspG cofit 44 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS27700 cold-shock protein no data 46 97
  Pantoea sp. MT58 IAI47_08745 transcription antiterminator/RNA stability regulator CspE insig. 43 97
  Pseudomonas stutzeri RCH2 Psest_3977 Cold shock proteins insig. 46 98
  Escherichia coli BL21 ECD_01793 stress protein, member of the CspA-family cofit 43 97
  Escherichia fergusonii Becca EFB2_02177 Cold shock-like protein CspC insig. 43 97
  Escherichia coli ECOR27 NOLOHH_17020 cspE transcription antiterminator/RNA stability regulator CspE no data 43 97
  Escherichia coli ECOR38 HEPCGN_04895 cspE transcription antiterminator/RNA stability regulator CspE no data 43 97
  Escherichia coli ECRC101 OKFHMN_26495 cspE transcription antiterminator/RNA stability regulator CspE insig. 43 97
  Escherichia coli ECRC101 MCAODC_18910 cspE transcription antiterminator/RNA stability regulator CspE insig. 43 97
  Escherichia coli ECRC102 NIAGMN_01565 cspE transcription antiterminator/RNA stability regulator CspE no data 43 97
  Escherichia coli ECRC62 BNILDI_15800 cspE transcription antiterminator/RNA stability regulator CspE insig. 43 97
  Escherichia coli ECRC98 JDDGAC_01070 cspE transcription antiterminator/RNA stability regulator CspE no data 43 97
  Escherichia coli ECRC99 KEDOAH_01610 cspE transcription antiterminator/RNA stability regulator CspE no data 43 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01907 Cold shock-like protein CspC insig. 43 97
  Escherichia coli Nissle 1917 ECOLIN_RS10145 transcription antiterminator/RNA stability regulator CspE no data 43 97
  Enterobacter asburiae PDN3 EX28DRAFT_0735 Cold shock proteins no data 43 97
  Enterobacter sp. TBS_079 MPMX20_02729 Cold shock-like protein CspC strong 43 97
  Erwinia tracheiphila SCR3 LU632_RS13210 cspE transcription antiterminator/RNA stability regulator CspE strong 43 97
  Escherichia coli BW25113 b1823 cspC stress protein, member of the CspA-family (NCBI) strong 43 97
  Klebsiella michiganensis M5al BWI76_RS17930 cold-shock protein CspC sig. 43 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2838 Cold shock protein CspC insig. 43 97
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 43 97
  Rhodanobacter denitrificans MT42 LRK55_RS16740 cold-shock protein no data 43 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17025 cold-shock protein insig. 43 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS00445 cold-shock protein strong 42 98
  Serratia liquefaciens MT49 IAI46_05870 transcription antiterminator/RNA stability regulator CspE insig. 42 97
  Pectobacterium carotovorum WPP14 HER17_RS11355 transcription antiterminator/RNA stability regulator CspE cofit 42 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03861 cold-shock DNA-binding protein family no data 43 100
  Paraburkholderia graminis OAS925 ABIE53_004916 CspA family cold shock protein no data 43 100
  Shewanella oneidensis MR-1 SO1648 cold shock domain family protein (NCBI ptt file) insig. 47 95
  Dickeya dadantii 3937 DDA3937_RS19755 cold-shock protein insig. 46 90
  Azospirillum brasilense Sp245 AZOBR_RS20315 cold-shock protein no data 45 97
  Dickeya dadantii 3937 DDA3937_RS11310 transcription antiterminator/RNA stability regulator CspE no data 44 92
  Dickeya dianthicola 67-19 HGI48_RS11345 transcription antiterminator/RNA stability regulator CspE no data 44 92
  Dickeya dianthicola ME23 DZA65_RS11690 transcription antiterminator/RNA stability regulator CspE insig. 44 92
  Phaeobacter inhibens DSM 17395 PGA1_c26360 cold shock protein sig. 43 98
  Rhodanobacter sp. FW510-T8 OKGIIK_07815 cspC cold-shock protein no data 42 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 39 100
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 43 97
  Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 43 97
  Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 43 97
  Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 43 97
  Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 42 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4536 Cold shock protein CspE no data 40 97
  Pectobacterium carotovorum WPP14 HER17_RS15290 transcription antiterminator/RNA stability regulator CspE cofit 40 97
  Rhizobium sp. OAE497 ABIE40_RS27285 cold-shock protein insig. 51 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS35875 cold-shock protein insig. 45 97
  Phocaeicola dorei CL03T12C01 ABI39_RS12865 cold shock domain-containing protein insig. 42 98
  Klebsiella michiganensis M5al BWI76_RS07980 cold-shock protein no data 42 97
  Sinorhizobium meliloti 1021 SMa0181 CspA5 cold shock protein transcriptional regulator no data 49 84
  Rhizobium sp. OAE497 ABIE40_RS28970 cold-shock protein cofit 44 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 44 95
  Paraburkholderia graminis OAS925 ABIE53_004735 CspA family cold shock protein strong 44 95