Homologs of CA265_RS11610 from Pedobacter sp. GW460-11-11-14-LB5

RNA-binding protein S4
SEED: FIG002958: hypothetical protein
KEGG: ribosome-associated protein

51 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11610 RNA-binding protein S4 insig. 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05220 RNA-binding S4 domain-containing protein insig. 64 99
o Dechlorosoma suillum PS Dsui_2344 hypothetical protein cofit 49 99
o Burkholderia phytofirmans PsJN BPHYT_RS14595 RNA-binding protein insig. 42 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04318 ribosome-associated protein insig. 42 97
  Shewanella sp. ANA-3 Shewana3_2616 RNA-binding S4 domain-containing protein (RefSeq) strong 47 88
o Paraburkholderia graminis OAS925 ABIE53_003080 ribosome-associated protein insig. 42 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS04385 RNA-binding S4 domain-containing protein insig. 41 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS09245 RNA-binding S4 domain-containing protein no data 44 97
o Kangiella aquimarina DSM 16071 B158DRAFT_1538 Uncharacterized conserved protein no data 47 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS13170 RNA-binding protein insig. 44 97
o Ralstonia solanacearum UW163 UW163_RS00395 RNA-binding protein no data 44 97
o Ralstonia solanacearum GMI1000 RS_RS03965 RNA-binding S4 domain-containing protein insig. 42 97
o Cupriavidus basilensis FW507-4G11 RR42_RS15225 RNA-binding protein insig. 42 99
o Rhodanobacter sp. FW510-T8 OKGIIK_05065 ybcJ RNA-binding protein insig. 39 99
  Shewanella amazonensis SB2B Sama_1264 RNA-binding S4 (RefSeq) insig. 40 88
o Ralstonia solanacearum PSI07 RPSI07_RS20045 RNA-binding protein insig. 41 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1838.1 FIG002958: hypothetical protein insig. 39 99
o Rhodanobacter denitrificans MT42 LRK55_RS01270 RNA-binding S4 domain-containing protein insig. 37 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01465 RNA-binding S4 domain-containing protein sig. 37 99
  Shewanella loihica PV-4 Shew_2468 RNA-binding S4 domain-containing protein (RefSeq) no data 38 88
o Pantoea sp. MT58 IAI47_14325 ribosome-associated protein YbcJ insig. 43 100
o Lysobacter sp. OAE881 ABIE51_RS14945 RNA-binding S4 domain-containing protein no data 40 97
o Serratia liquefaciens MT49 IAI46_05395 ribosome-associated protein YbcJ no data 41 99
  Rahnella sp. WP5 EX31_RS22830 ribosome-associated protein YbcJ no data 43 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4446 FIG002958: hypothetical protein no data 38 100
  Enterobacter sp. TBS_079 MPMX20_01106 putative protein YbcJ sig. 41 88
  Enterobacter asburiae PDN3 EX28DRAFT_2450 Uncharacterized conserved protein insig. 43 88
  Klebsiella michiganensis M5al BWI76_RS07095 ribosome-associated protein insig. 41 88
  Shewanella oneidensis MR-1 SO1835 conserved hypothetical protein (NCBI ptt file) sig. 45 69
  Herbaspirillum seropedicae SmR1 HSERO_RS18200 RNA-binding protein insig. 37 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03153 putative protein YbcJ no data 35 100
  Escherichia coli BL21 ECD_00478 ribosome-associated protein; putative RNA-binding protein no data 35 100
  Escherichia fergusonii Becca EFB2_03533 putative protein YbcJ no data 35 100
  Escherichia coli ECOR27 NOLOHH_00800 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECOR38 HEPCGN_06450 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC101 OKFHMN_07810 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC101 MCAODC_27030 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC102 NIAGMN_05865 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC62 BNILDI_22230 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC98 JDDGAC_11460 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli ECRC99 KEDOAH_20160 ybcJ ribosome-associated protein YbcJ no data 35 100
  Escherichia coli BW25113 b0528 ybcJ orf, hypothetical protein (VIMSS) no data 35 100
  Vibrio cholerae E7946 ATCC 55056 CSW01_17140 urease cofit 46 76
  Escherichia coli Nissle 1917 ECOLIN_RS03060 ribosome-associated protein YbcJ no data 35 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07730 RNA-binding S4 domain-containing protein insig. 37 97
  Fusobacterium nucleatum SB010 HUW76_00020 S4 domain-containing protein YaaA no data 45 79
  Erwinia tracheiphila SCR3 LU632_RS15200 ybcJ ribosome-associated protein YbcJ insig. 40 88
  Dickeya dianthicola 67-19 HGI48_RS15160 ribosome-associated protein YbcJ no data 34 85
  Dickeya dianthicola ME23 DZA65_RS15965 ribosome-associated protein YbcJ no data 34 85
  Synechococcus elongatus PCC 7942 Synpcc7942_0081 RNA-binding S4 insig. 42 74