| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10065 | | DNA-binding response regulator | insig. | 100 | 100 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06355 | | DNA-binding response regulator | insig. | 46 | 96 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19490 | | response regulator transcription factor | insig. | 47 | 98 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03250 | | DNA-binding response regulator | insig. | 43 | 96 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16950 | | response regulator transcription factor | insig. | 43 | 100 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS23095 | | DNA-binding response regulator | insig. | 42 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS14130 | | hypothetical protein | insig. | 41 | 95 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05535 | | response regulator transcription factor | insig. | 43 | 97 |
| | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 38 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 37 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 38 | 96 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 36 | 96 |
| | Cellulophaga baltica 18 | M666_RS04555 | | response regulator transcription factor | insig. | 35 | 95 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_4548 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 32 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 37 | 98 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 35 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 35 | 99 |
| | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 36 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS24990 | | response regulator transcription factor | insig. | 37 | 94 |
| | Pseudomonas sp. RS175 | PFR28_01618 | | Oxygen regulatory protein NreC | strong | 38 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 33 | 100 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 34 | 94 |
| | Variovorax sp. SCN45 | GFF850 | | Two-component transcriptional response regulator, LuxR family | insig. | 34 | 96 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 34 | 98 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04120 | | DNA-binding response regulator | insig. | 33 | 99 |
| | Methylophilus sp. DMC18 | GFF606 | | Nitrate/nitrite response regulator protein NarL | insig. | 36 | 95 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 36 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 36 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 34 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS09550 | | DNA-binding response regulator | insig. | 32 | 99 |
| | Methylophilus sp. DMC18 | GFF88 | | Response regulator UvrY | insig. | 36 | 96 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24135 | | DNA-binding response regulator | insig. | 36 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 34 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 34 | 99 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_02305 | | LuxR family transcriptional regulator | insig. | 42 | 60 |
| | Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 35 | 95 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1417 | | Regulatory protein, LuxR:Response regulator receiver | cofit | 34 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 32 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | strong | 32 | 96 |
| | Sphingobium sp. HT1-2 | GFF3503 | | two-component response regulator | cofit | 32 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 36 | 93 |
| | Pseudomonas sp. SVBP6 | COO64_RS05130 | | response regulator transcription factor | insig. | 35 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09600 | | LuxR family transcriptional regulator | insig. | 34 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | insig. | 34 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS06870 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 34 | 96 |
| | Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 33 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12975 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 32 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 32 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS31295 | | LuxR family transcriptional regulator | insig. | 32 | 99 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 34 | 96 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 34 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS13925 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | cofit | 33 | 96 |
| | Cellulophaga baltica 18 | M666_RS08490 | | response regulator transcription factor | insig. | 30 | 95 |
| | Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 35 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3299 | | two component transcriptional regulator, LuxR family | sig. | 35 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3299 | | two component transcriptional regulator, LuxR family | insig. | 35 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 37 | 95 |
| | Acinetobacter radioresistens SK82 | MPMX26_00164 | | Response regulator GacA | strong | 33 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25670 | | regulator | sig. | 37 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 35 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34135 | | two-component system response regulator NarL | insig. | 35 | 98 |
| | Acinetobacter baumannii LAC-4 | RR41_RS17790 | | response regulator | sig. | 32 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 33 | 98 |
| | Pseudomonas putida KT2440 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | strong | 33 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 33 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 31 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04126 | | Transcriptional regulatory protein DegU | cofit | 36 | 95 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 34 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 33 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 33 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 33 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 33 | 97 |
| | Pantoea sp. MT58 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 31 | 98 |
| | Pseudomonas sp. DMC3 | GFF4570 | | Transcriptional regulatory protein DegU | insig. | 35 | 95 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 33 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 37 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 33 | 97 |
| | Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 32 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 32 | 96 |
| | Pseudomonas sp. RS175 | PFR28_01410 | | Response regulator GacA | strong | 32 | 96 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 32 | 99 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 32 | 97 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 31 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22075 | | hypothetical protein | strong | 34 | 95 |
| | Ralstonia solanacearum GMI1000 | RS_RS00950 | | DNA-binding response regulator | strong | 32 | 98 |
| | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 31 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 36 | 93 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS02005 | | DNA-binding response regulator | insig. | 33 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS15330 | | DNA-binding response regulator | insig. | 33 | 97 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS04860 | | two-component system response regulator UvrY | strong | 30 | 98 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 32 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3852 | | DNA-binding response regulator, LuxR family | no data | 36 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5741 | | Nitrate/nitrite response regulator protein | no data | 34 | 95 |
| | Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 32 | 96 |
| | Pseudomonas sp. S08-1 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | strong | 32 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_725 | | Nitrate/nitrite response regulator protein | strong | 35 | 94 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 34 | 92 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 32 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 34 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33915 | | two-component system response regulator NarL | insig. | 34 | 96 |