Homologs of CA264_03350 from Pontibacter actiniarum KMM 6156, DSM 19842

RNA polymerase subunit sigma-24
SEED: RNA polymerase ECF-type sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_03350		RNA polymerase subunit sigma-24	insig.	100	100
o	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS21720		RNA polymerase subunit sigma-70	insig.	47	94
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS01435		RNA polymerase sigma factor	insig.	45	91
o	Bacteroides thetaiotaomicron VPI-5482	BT4461		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	44	89
o	Bacteroides ovatus ATCC 8483	BACOVA_05268		Sigma-70 region 2	insig.	45	89
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04360		sigma-70 family RNA polymerase sigma factor	insig.	30	81
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3601.1		RNA polymerase sigma-70 factor	insig.	25	92
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS22010		RNA polymerase sigma factor	insig.	25	89
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS21575		RNA polymerase subunit sigma	insig.	24	87
	Rhodopseudomonas palustris CGA009	TX73_003315		RNA polymerase sigma factor	insig.	27	86
	Variovorax sp. SCN45	GFF4503		RNA polymerase sigma factor	insig.	26	90
	Bacteroides ovatus ATCC 8483	BACOVA_00784		Sigma-70 region 2	insig.	25	82
	Rhodanobacter sp. FW510-T8	OKGIIK_12575	rpoE	RNA polymerase subunit sigma-24	insig.	29	79
	Bacteroides thetaiotaomicron VPI-5482	BT0978		ECF-type sigma factor (NCBI ptt file)	sig.	25	78
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS14290		sigma-70 family RNA polymerase sigma factor	insig.	30	72
	Phocaeicola dorei CL03T12C01	ABI39_RS09920		sigma-70 family RNA polymerase sigma factor	insig.	30	72
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS13970		RNA polymerase sigma factor	insig.	26	70
	Bacteroides thetaiotaomicron VPI-5482	BT2044		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	25	76
	Shewanella amazonensis SB2B	Sama_2036		ECF subfamily RNA polymerase sigma-24 factor (RefSeq)	insig.	32	62
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4578		RNA polymerase sigma factor, sigma-70 family	insig.	27	87
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1840.1		FIG01210863: hypothetical protein	insig.	26	82
	Bacteroides ovatus ATCC 8483	BACOVA_00669		Sigma-70 region 2	insig.	25	77
	Bacteroides stercoris CC31F	HMPREF1181_RS08110		sigma-70 family RNA polymerase sigma factor	insig.	24	86
	Rhodanobacter denitrificans MT42	LRK55_RS11045		sigma-70 family RNA polymerase sigma factor	insig.	27	90
	Burkholderia phytofirmans PsJN	BPHYT_RS22710		XRE family transcriptional regulator	sig.	29	88
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS11315		sigma-70 family RNA polymerase sigma factor	insig.	27	85
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_14945		RNA polymerase subunit sigma-24	strong	27	81
	Variovorax sp. SCN45	GFF3817		RNA polymerase sigma factor	insig.	27	90
	Bosea sp. OAE506	ABIE41_RS07610		sigma-70 family RNA polymerase sigma factor	insig.	26	86
	Bacteroides stercoris CC31F	HMPREF1181_RS04900		RNA polymerase sigma-70 factor	insig.	27	92
	Variovorax sp. OAS795	ABID97_RS08165		sigma-70 family RNA polymerase sigma factor	insig.	27	90
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02732		RNA polymerase sigma-70 factor, ECF subfamily	insig.	28	86
	Cupriavidus basilensis FW507-4G11	RR42_RS05810		RNA polymerase sigma factor	insig.	26	91
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS01700		RNA polymerase sigma factor	insig.	25	82
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4220		RNA polymerase sigma factor RpoE	insig.	24	92
	Lysobacter sp. OAE881	ABIE51_RS16295		sigma-70 family RNA polymerase sigma factor	insig.	23	98
	Azospirillum sp. SherDot2	MPMX19_01371		hypothetical protein	insig.	29	57
	Rhodopseudomonas palustris CGA009	TX73_024905		sigma-70 family RNA polymerase sigma factor	insig.	24	92
	Azospirillum brasilense Sp245	AZOBR_RS10625		RNA polymerase sigma-70 factor	insig.	31	58
	Synechococcus elongatus PCC 7942	Synpcc7942_2004	sigI	RNA polymerase sigma factor	insig.	26	79
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS12140		hypothetical protein	insig.	25	86
	Magnetospirillum magneticum AMB-1	AMB_RS14160		RNA polymerase sigma factor	cofit	24	89
	Rhodospirillum rubrum S1H	Rru_A2537		Sigma-24 (FecI) (NCBI)	insig.	25	91
	Rhodanobacter denitrificans MT42	LRK55_RS05200		sigma-70 family RNA polymerase sigma factor	insig.	26	84
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS05425		sigma-70 family RNA polymerase sigma factor	insig.	26	84
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07040		RNA polymerase sigma factor	insig.	29	86
	Rhodanobacter sp. FW510-T8	OKGIIK_05040		RNA polymerase subunit sigma	insig.	26	87
	Cupriavidus basilensis FW507-4G11	RR42_RS05730		DNA-directed RNA polymerase sigma-70 factor	insig.	30	86
	Phocaeicola dorei CL03T12C01	ABI39_RS12815		sigma-70 family RNA polymerase sigma factor	insig.	23	78
	Bacteroides thetaiotaomicron VPI-5482	BT4347		RNA polymerase ECF-type sigma factor (NCBI ptt file)	insig.	23	90
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_01465		RNA polymerase sigma-70 factor, ECF subfamily	insig.	26	83
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16905		sigma-70 family RNA polymerase sigma factor	insig.	23	78
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3485		RNA polymerase sigma-70 factor, Bacteroides expansion family 1	insig.	29	76
	Bacteroides ovatus ATCC 8483	BACOVA_05165		Sigma-70 region 2	insig.	22	90
	Bacteroides ovatus ATCC 8483	BACOVA_01604		Sigma-70 region 2	insig.	27	70
	Kangiella aquimarina DSM 16071	B158DRAFT_2180		RNA polymerase, sigma-24 subunit, RpoE	strong	25	82
	Ralstonia sp. UNC404CL21Col	ABZR87_RS16160		sigma-70 family RNA polymerase sigma factor	insig.	24	89
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS05410		RNA polymerase sigma factor	strong	26	55
	Bacteroides thetaiotaomicron VPI-5482	BT4571		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	25	76
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF365		RNA polymerase sigma factor	insig.	24	88
	Phocaeicola dorei CL03T12C01	ABI39_RS02030		RNA polymerase sigma-70 factor	insig.	24	83
	Rhodanobacter sp. FW510-T8	OKGIIK_01380	rpoE	RNA polymerase subunit sigma-24	insig.	30	73
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08940		RNA polymerase sigma-70 factor	insig.	28	82
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_11965		RNA polymerase subunit sigma	insig.	24	73
	Phocaeicola dorei CL03T12C01	ABI39_RS03415		RNA polymerase sigma-70 factor	insig.	27	88
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS01495		sigma-70 family RNA polymerase sigma factor	insig.	25	87
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_00665		RNA polymerase subunit sigma-24	strong	25	81
	Azospirillum sp. SherDot2	MPMX19_05214		ECF RNA polymerase sigma factor SigE	insig.	25	78
	Burkholderia phytofirmans PsJN	BPHYT_RS24975		RNA polymerase sigma24 factor	strong	26	77
	Ralstonia solanacearum IBSBF1503	RALBFv3_RS04270		DNA-directed RNA polymerase sigma-70 factor	insig.	25	81
	Ralstonia solanacearum UW163	UW163_RS09400		DNA-directed RNA polymerase sigma-70 factor	insig.	25	81
	Pseudomonas fluorescens FW300-N2E3	AO353_00830		RNA polymerase subunit sigma	no data	27	81
	Phocaeicola dorei CL03T12C01	ABI39_RS12855		RNA polymerase sigma factor	insig.	24	72
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS16945		RNA polymerase sigma factor	sig.	24	72
	Agrobacterium fabrum C58	Atu1982		sigma factor	insig.	23	83
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS18335		sigma-70 family RNA polymerase sigma factor	strong	23	82
	Pseudomonas syringae pv. syringae B728a	Psyr_2096		Sigma-70 region 2	no data	26	72
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_2096		Sigma-70 region 2	no data	26	72
	Alteromonas macleodii MIT1002	MIT1002_02719		Sigma-24	no data	26	78
	Pseudomonas putida KT2440	PP_2088		RNA polymerase sigma factor SigX	strong	26	72
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS13700		hypothetical protein	insig.	25	83
	Bacteroides thetaiotaomicron VPI-5482	BT1817		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	22	82
	Bacteroides thetaiotaomicron VPI-5482	BT0248		RNA polymerase ECF-type sigma factor (NCBI ptt file)	sig.	25	72
	Lysobacter sp. OAE881	ABIE51_RS18540		sigma-70 family RNA polymerase sigma factor	insig.	24	77
	Pseudomonas fluorescens FW300-N2C3	AO356_02795		RNA polymerase subunit sigma	no data	27	81
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS07180		RNA polymerase sigma factor RpoE	strong	26	78
	Bacteroides ovatus ATCC 8483	BACOVA_00397		Sigma-70 region 2	sig.	25	77
	Phocaeicola dorei CL03T12C01	ABI39_RS14645		sigma-70 family RNA polymerase sigma factor	strong	23	82
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09110		RNA polymerase sigma-70 factor	insig.	28	78
	Rhizobium sp. OAE497	ABIE40_RS01975		sigma-70 family RNA polymerase sigma factor	insig.	25	79
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS11995		RNA polymerase subunit sigma	insig.	29	76
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS10380		RNA polymerase subunit sigma-70	insig.	28	87
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS09150		sigma-70 family RNA polymerase sigma factor	insig.	26	76
	Klebsiella michiganensis M5al	BWI76_RS14070		ECF subfamily RNA polymerase sigma-24 subunit	no data	30	60
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS07500		sigma-70 family RNA polymerase sigma factor	insig.	28	64
	Mycobacterium tuberculosis H37Rv	Rv3911		Possible alternative RNA polymerase sigma factor SigM	insig.	23	85
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_604		FIG006045: Sigma factor, ECF subfamily	insig.	34	53
	Rhodanobacter denitrificans MT42	LRK55_RS07240		sigma-70 family RNA polymerase sigma factor	cofit	28	64
	Rhodanobacter denitrificans MT42	LRK55_RS02580		sigma-70 family RNA polymerase sigma factor	cofit	28	81
	Pseudomonas simiae WCS417	PS417_20990		RNA polymerase sigma factor SigX	no data	27	81