Homologs of Shewana3_4076 from Shewanella sp. ANA-3

two component, sigma54 specific, Fis family transcriptional regulator (RefSeq)
SEED: Sigma-54 dependent response regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_4076 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) cofit 100 100
o Shewanella oneidensis MR-1 SO4718 sigma-54 dependent response regulator (NCBI ptt file) sig. 99 100
o Shewanella loihica PV-4 Shew_3682 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) strong 89 100
o Shewanella amazonensis SB2B Sama_0125 response regulator receiver protein (RefSeq) strong 84 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_07640 sigma-54-dependent Fis family transcriptional regulator insig. 62 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1195 Sigma-54 dependent response regulator insig. 53 95
o Xanthobacter sp. DMC5 GFF4458 Transcriptional regulatory protein ZraR insig. 50 97
o Azospirillum sp. SherDot2 MPMX19_03494 Regulatory protein AtoC insig. 52 95
o Dechlorosoma suillum PS Dsui_3286 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 51 96
o Azospirillum brasilense Sp245 AZOBR_RS18445 chemotaxis protein CheY insig. 49 95
o Phaeobacter inhibens DSM 17395 PGA1_c27610 transcriptional regulatory protein, containing sigma-54 interaction domain insig. 44 95
o Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 42 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU2394 ntrC1 sigma-54 dependent transcriptional regulator/response regulator (TIGR) sig. 41 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0332 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 40 95
  Pseudomonas sp. SVBP6 COO64_RS16760 sigma-54 dependent transcriptional regulator insig. 42 95
  Ralstonia solanacearum GMI1000 RS_RS01635 sigma-54-dependent Fis family transcriptional regulator insig. 42 96
o Pseudomonas orientalis W4I3 QF045_RS08450 sigma-54 dependent transcriptional regulator insig. 40 93
  Ralstonia solanacearum PSI07 RPSI07_RS22520 sigma-54-dependent Fis family transcriptional regulator insig. 42 96
  Pseudomonas sp. BP01 JOY50_RS14825 sigma-54 dependent transcriptional regulator insig. 41 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS06635 sigma-54 dependent transcriptional regulator strong 41 96
  Pseudomonas putida KT2440 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein strong 41 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10795 sigma-54-dependent Fis family transcriptional regulator insig. 41 96
  Ralstonia solanacearum UW163 UW163_RS02785 sigma-54-dependent Fis family transcriptional regulator insig. 41 96
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 39 95
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC insig. 39 95
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 39 95
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein insig. 39 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 39 95
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 39 95
  Pseudomonas sp. DMC3 GFF5115 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 41 95
  Ralstonia solanacearum GMI1000 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator cofit 41 96
  Pseudomonas fluorescens FW300-N2E3 AO353_16265 Fis family transcriptional regulator strong 41 95
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 39 93
  Desulfovibrio vulgaris Miyazaki F DvMF_2601 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 41 94
o Pseudomonas stutzeri RCH2 Psest_0705 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 39 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS16305 sigma-54 dependent transcriptional regulator insig. 40 95
  Desulfovibrio vulgaris Miyazaki F DvMF_1461 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 46 80
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4775 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake strong 41 95
  Methylophilus sp. DMC18 GFF2815 Regulatory protein AtoC insig. 39 95
  Ralstonia solanacearum PSI07 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator strong 40 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator strong 40 96
  Ralstonia solanacearum UW163 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator strong 40 96
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 40 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 40 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01292 Regulatory protein AtoC cofit 40 93
  Desulfovibrio vulgaris Miyazaki F DvMF_1260 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 42 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09510 sigma-54-dependent Fis family transcriptional regulator sig. 38 95
  Desulfovibrio vulgaris Miyazaki F DvMF_2095 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) sig. 41 97
  Marinobacter adhaerens HP15 HP15_328 two component, sigma54 specific, transcriptional regulator, Fis family strong 46 80
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23225 sigma-54-dependent Fis family transcriptional regulator insig. 43 83
  Ralstonia solanacearum UW163 UW163_RS16475 sigma-54-dependent Fis family transcriptional regulator insig. 43 83
o Pseudomonas segetis P6 ACVTMO_RS06070 sigma-54-dependent transcriptional regulator no data 44 81
o Pseudomonas sp. S08-1 OH686_17260 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 41 93
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 39 93
  Acidovorax sp. GW101-3H11 Ac3H11_4019 Sigma-54 dependent transcriptional regulator sig. 43 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_776 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake insig. 41 95
  Ralstonia solanacearum GMI1000 RS_RS17240 sigma-54-dependent Fis family transcriptional regulator sig. 42 83
  Pseudomonas aeruginosa MRSN321 DY961_RS23710 pilR;inference=COORDINATES two-component system response regulator PilR strong 38 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_09635 sigma-54-dependent Fis family transcriptional regulator insig. 42 95
  Pseudomonas aeruginosa PA14 IKLFDK_00790 two-component response regulator PilR strong 38 95
  Pseudomonas aeruginosa PUPa3 DQ20_RS56175 pilR;inference=COORDINATES two-component system response regulator PilR strong 38 95
  Dechlorosoma suillum PS Dsui_3467 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 39 94
  Pseudomonas sp. RS175 PFR28_03376 C4-dicarboxylate transport transcriptional regulatory protein DctD sig. 40 95
o Pseudomonas syringae pv. syringae B728a Psyr_0831 Two-component response regulator CbrB sig. 41 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0831 Two-component response regulator CbrB no data 41 93
  Pseudomonas putida KT2440 PP_4696 Nitrogen regulation protein NR(I) strong 40 93
  Ralstonia solanacearum PSI07 RPSI07_RS00045 sigma-54-dependent Fis family transcriptional regulator insig. 42 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04380 response regulator strong 42 80
  Pseudomonas sp. S08-1 OH686_13325 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake cofit 40 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5122 Type IV fimbriae expression regulatory protein PilR insig. 39 95
o Acinetobacter baumannii LAC-4 RR41_RS17800 sigma-54 dependent transcriptional regulator insig. 36 96
  Cellulophaga baltica 18 M666_RS19210 sigma-54 dependent transcriptional regulator insig. 42 80
  Pseudomonas fluorescens FW300-N2C3 AO356_18205 Fis family transcriptional regulator insig. 41 95
  Cellulophaga baltica 18 M666_RS02825 sigma-54 dependent transcriptional regulator cofit 40 94
  Desulfovibrio vulgaris Miyazaki F DvMF_2748 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 44 81
  Pseudomonas sp. S08-1 OH686_16390 Type IV fimbriae expression regulatory protein PilR cofit 38 94
  Dechlorosoma suillum PS Dsui_0135 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains cofit 38 97
  Pseudomonas sp. SVBP6 COO64_RS15090 sigma-54 dependent transcriptional regulator strong 44 81
  Pseudomonas simiae WCS417 PS417_05535 Fis family transcriptional regulator strong 39 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS23515 sigma-54 dependent transcriptional regulator strong 40 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS01375 sigma-54 dependent transcriptional regulator strong 41 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2858 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 40 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5565 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake insig. 40 95
  Pseudomonas sp. BP01 JOY50_RS27675 sigma-54 dependent transcriptional regulator cofit 40 93
  Shewanella loihica PV-4 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 39 95
  Pseudomonas fluorescens FW300-N2C3 AO356_16075 Fis family transcriptional regulator strong 40 93
  Xanthobacter sp. DMC5 GFF4834 Regulatory protein AtoC insig. 38 95
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16520 DNA-binding response regulator insig. 38 95
  Desulfovibrio vulgaris Miyazaki F DvMF_2109 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 37 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0700 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 42 95
  Pseudomonas sp. DMC3 GFF4030 Transcriptional regulatory protein ZraR strong 40 93
  Pseudomonas sp. RS175 PFR28_03718 Transcriptional regulatory protein ZraR strong 40 93
  Pseudomonas fluorescens SBW25 PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator insig. 40 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05620 sigma-54-dependent Fis family transcriptional regulator strong 40 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05020 sigma-54 dependent transcriptional regulator strong 38 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU1419 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) sig. 38 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5156 Two-component sensor CbrB: intrcellular carbon:nitrogen balance strong 40 93
  Pseudomonas simiae WCS417 PS417_23895 Fis family transcriptional regulator no data 40 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2114 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) insig. 39 94
  Azospirillum sp. SherDot2 MPMX19_04251 C4-dicarboxylate transport transcriptional regulatory protein DctD insig. 39 95