Homologs of Shewana3_1374 from Shewanella sp. ANA-3

transcription antitermination protein nusG (RefSeq)
SEED: Transcriptional activator RfaH
KEGG: transcriptional antiterminator RfaH

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Shewanella sp. ANA-3	Shewana3_1374		transcription antitermination protein nusG (RefSeq)	strong	100	100
o	Shewanella oneidensis MR-1	SO3194		transcriptional activator rfaH, putative (NCBI ptt file)	strong	91	100
o	Shewanella loihica PV-4	Shew_1398		NusG antitermination factor (RefSeq)	strong	53	98
o	Shewanella amazonensis SB2B	Sama_2265		transcriptional activator rfaH, putative (RefSeq)	strong	55	100
o	Pseudomonas lactucae CFBP13502	GEMAOFIL_02604		Transcription antitermination protein RfaH	cofit	35	99
o	Pseudomonas syringae pv. syringae B728a	Psyr_3226		Transcriptional activator RfaH	insig.	34	98
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_3226		Transcriptional activator RfaH	insig.	34	98
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_5950		Transcriptional activator RfaH	no data	35	98
o	Enterobacter asburiae PDN3	EX28DRAFT_4505		transcription elongation factor/antiterminator RfaH	cofit	33	95
o	Enterobacter sp. TBS_079	MPMX20_04440		Transcription antitermination protein RfaH	strong	33	95
o	Pseudomonas sp. DMC3	GFF3566		Transcription antitermination protein RfaH	no data	37	94
o	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS15230		transcription/translation regulatory transformer protein RfaH	no data	36	92
o	Klebsiella pneumoniae MKP103	KDGMDA_09835		transcription/translation regulatory transformer protein RfaH	strong	34	95
o	Rahnella sp. WP5	EX31_RS14590		transcription/translation regulatory transformer protein RfaH	insig.	34	92
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF267		Transcriptional activator RfaH	strong	34	92
o	Pantoea sp. MT58	IAI47_18250		transcription/translation regulatory transformer protein RfaH	strong	36	92
o	Kangiella aquimarina DSM 16071	B158DRAFT_2343		transcriptional activator RfaH	strong	32	92
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_5081		Transcriptional activator RfaH	no data	35	98
o	Klebsiella michiganensis M5al	BWI76_RS01340		transcription/translation regulatory transformer protein RfaH	no data	33	95
o	Pectobacterium carotovorum WPP14	HER17_RS20570		transcription/translation regulatory transformer protein RfaH	strong	34	92
o	Herbaspirillum seropedicae SmR1	HSERO_RS02425		transcriptional activator	strong	33	96
o	Escherichia fergusonii Becca	EFB2_04775		Transcription antitermination protein RfaH	strong	33	92
o	Escherichia coli Nissle 1917	ECOLIN_RS22150		transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli BL21	ECD_03733		transcription antitermination protein	strong	33	92
o	Escherichia coli ECOR27	NOLOHH_06395	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECOR38	HEPCGN_12895	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECRC100	OKFHMN_14265	rfaH	transcription/translation regulatory transformer protein RfaH	cofit	33	92
o	Escherichia coli ECRC101	MCAODC_04770	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECRC102	NIAGMN_12020	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECRC62	BNILDI_05135	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECRC98	JDDGAC_17890	rfaH	transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Escherichia coli ECRC99	KEDOAH_13885	rfaH	transcription/translation regulatory transformer protein RfaH	no data	33	92
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_04211		Transcription antitermination protein RfaH	strong	33	92
o	Escherichia coli BW25113	b3842	rfaH	transcriptional activator RfaH (NCBI)	strong	33	92
o	Erwinia tracheiphila SCR3	LU632_RS23970	rfaH	transcription/translation regulatory transformer protein RfaH	strong	34	93
o	Erwinia amylovora T8	OLJFJH_06535		transcription/translation regulatory transformer protein RfaH	strong	34	95
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_08615	rfaH	transcription/translation regulatory transformer protein RfaH	cofit	34	93
o	Dickeya dadantii 3937	DDA3937_RS20290		transcription/translation regulatory transformer protein RfaH	strong	34	92
o	Serratia liquefaciens MT49	IAI46_01105		transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Dickeya dianthicola 67-19	HGI48_RS00935		transcription/translation regulatory transformer protein RfaH	strong	33	92
o	Dickeya dianthicola ME23	DZA65_RS00995		transcription/translation regulatory transformer protein RfaH	cofit	33	92
o	Pseudomonas stutzeri RCH2	Psest_2605		transcriptional activator RfaH	sig.	34	94
o	Magnetospirillum magneticum AMB-1	AMB_RS00245		transcriptional activator RfaH	insig.	29	98
o	Vibrio cholerae E7946 ATCC 55056	CSW01_05050		transcription/translation regulatory transformer protein RfaH	insig.	33	92
o	Castellaniella sp019104865 MT123	ABCV34_RS12845		transcription termination/antitermination NusG family protein	cofit	29	94
o	Marinobacter adhaerens HP15	HP15_p187g93		transcriptional activator RfaH	insig.	32	88
o	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS14250		UpxY family transcription antiterminator	insig.	27	98
	Marinobacter adhaerens HP15	HP15_2404		transcriptional activator RfaH	strong	32	75
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS01815		antitermination protein NusG	cofit	30	80
o	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_4415		Transcription antiterminator	strong	27	94
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS07905		antitermination protein NusG	insig.	25	79
	Shewanella amazonensis SB2B	Sama_0201		transcription antitermination protein NusG (RefSeq)	no data	30	92
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_15910		Transcriptional antiterminator NusG	cofit	30	58
	Shewanella loihica PV-4	Shew_0146		NusG antitermination factor (RefSeq)	no data	29	92
	Shewanella sp. ANA-3	Shewana3_0187		transcription antitermination protein nusG (RefSeq)	no data	29	92
	Shewanella oneidensis MR-1	SO0219	nusG	transcription antitermination protein NusG (NCBI ptt file)	no data	29	92
	Erwinia tracheiphila SCR3	LU632_RS25785		transcriptional antiterminator NusG	insig.	29	58
o	Parabacteroides merdae CL09T00C40	HMPREF1078_RS00925		UpxY family transcription antiterminator	strong	26	99
	Pseudomonas segetis P6	ACVTMO_RS04580	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS08980		UpxY family transcription antiterminator	strong	24	79
	Erwinia tracheiphila SCR3	LU632_RS25610		antitermination protein NusG	insig.	28	63
	Azospirillum sp. SherDot2	MPMX19_00380		Transcription termination/antitermination protein NusG	no data	26	90
	Ralstonia sp. UNC404CL21Col	ABZR87_RS02950		transcription termination/antitermination protein NusG	no data	27	92
	Azospirillum brasilense Sp245	AZOBR_RS11535		transcription termination/antitermination factor NusG	no data	26	90
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS17370		UpxY family transcription antiterminator	sig.	25	93
	Dickeya dianthicola 67-19	HGI48_RS01065		transcription termination/antitermination protein NusG	no data	28	93
	Dickeya dianthicola ME23	DZA65_RS01130		transcription termination/antitermination protein NusG	no data	28	93
	Acidovorax sp. GW101-3H11	Ac3H11_4453		Transcription antitermination protein NusG	no data	26	90
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1798		Transcription antitermination protein NusG	no data	25	90
	Methylophilus sp. DMC18	GFF1584		Transcription termination/antitermination protein NusG	no data	27	83
	Rhodospirillum rubrum S1H	Rru_A2700		NusG antitermination factor (NCBI)	no data	24	90
o	Phocaeicola dorei CL03T12C01	ABI39_RS13390		UpxY family transcription antiterminator	insig.	29	93
	Pseudomonas sp. DMC3	GFF3752		Transcription termination/antitermination protein NusG	no data	28	92
	Rhodopseudomonas palustris CGA009	TX73_016925		transcription termination/antitermination protein NusG	no data	21	90
	Pectobacterium carotovorum WPP14	HER17_RS20455		transcription termination/antitermination protein NusG	no data	28	92
	Erwinia amylovora T8	OLJFJH_06650		transcription termination/antitermination protein NusG	no data	28	92
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_10810	nusG	transcription termination/antitermination protein NusG	no data	27	92
	Erwinia tracheiphila SCR3	LU632_RS00905	nusG	transcription termination/antitermination protein NusG	no data	27	92
	Serratia liquefaciens MT49	IAI46_22800		hypothetical protein	insig.	28	58
	Dickeya dadantii 3937	DDA3937_RS01075		transcription termination/antitermination protein NusG	no data	28	92
	Alteromonas macleodii MIT1002	MIT1002_03740		hypothetical protein	no data	29	92
	Pseudomonas aeruginosa MRSN321	DY961_RS29615	nusG;go_process=DNA-templated	transcription termination/antitermination protein NusG	no data	27	92
	Pseudomonas aeruginosa PUPa3	DQ20_RS43950	nusG;go_process=DNA-templated	transcription termination/antitermination protein NusG	no data	27	92
	Bifidobacterium breve UCC2003	BBR_RS19420		transcription termination/antitermination factor NusG	no data	24	90
	Escherichia coli BL21	ECD_03858		transcription termination factor	no data	28	92
	Escherichia fergusonii Becca	EFB2_04629		Transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECOR27	NOLOHH_05595	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECOR38	HEPCGN_12100	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC100	OKFHMN_13450	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC101	MCAODC_03950	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC102	NIAGMN_11200	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC62	BNILDI_05930	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC98	JDDGAC_17075	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli ECRC99	KEDOAH_14710	nusG	transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_04069		Transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli Nissle 1917	ECOLIN_RS22980		transcription termination/antitermination protein NusG	no data	28	92
	Escherichia coli BW25113	b3982	nusG	transcription antitermination protein NusG (NCBI)	no data	28	92
	Klebsiella pneumoniae MKP103	KDGMDA_09955		transcription termination/antitermination protein NusG	no data	28	92
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4216		Transcription antitermination protein NusG	no data	28	92
	Pseudomonas syringae pv. syringae B728a	Psyr_4560		transcription antitermination protein nusG	no data	28	92