Homologs of Sama_2580 from Shewanella amazonensis SB2B

putative diguanylate phosphodiesterase (RefSeq)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_2580 putative diguanylate phosphodiesterase (RefSeq) insig. 100 100
  Shewanella amazonensis SB2B Sama_0809 putative diguanylate phosphodiesterase (RefSeq) insig. 33 94
  Shewanella loihica PV-4 Shew_0951 response regulator receiver modulated diguanylate phosphodiesterase (RefSeq) insig. 32 93
  Herbaspirillum seropedicae SmR1 HSERO_RS03135 diguanylate cyclase sig. 33 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_08305 diguanylate phosphodiesterase insig. 31 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1770.1 hypothetical protein insig. 30 99
  Rhodospirillum rubrum S1H Rru_A3494 Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation (NCBI) insig. 28 97
o Pseudomonas sp. SVBP6 COO64_RS26040 EAL domain-containing protein insig. 31 91
  Pseudomonas sp. SVBP6 COO64_RS04950 EAL domain-containing protein insig. 30 93
  Alteromonas macleodii MIT1002 MIT1002_04215 Bacteriophytochrome cph2 insig. 31 92
  Magnetospirillum magneticum AMB-1 AMB_RS10945 diguanylate phosphodiesterase insig. 30 91
  Methylophilus sp. DMC18 GFF1835 Regulator of RpoS cofit 29 94
o Pseudomonas fluorescens FW300-N2E3 AO353_18200 diguanylate phosphodiesterase insig. 31 90
  Rhodopseudomonas palustris CGA009 TX73_008635 EAL domain-containing response regulator insig. 31 85
  Pseudomonas sp. SVBP6 COO64_RS26085 EAL domain-containing protein insig. 31 90
o Pseudomonas sp. RS175 PFR28_01497 Sensor histidine kinase RcsC insig. 31 90
  Pseudomonas aeruginosa PA14 IKLFDK_00990 diguanylate phosphodiesterase insig. 30 90
  Pseudomonas aeruginosa MRSN321 DY961_RS13125 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 29 91
  Pseudomonas aeruginosa PA14 IKLFDK_20360 two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 29 91
  Pseudomonas aeruginosa PUPa3 DQ20_RS48445 rocR;inference=COORDINATES two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR insig. 29 91
  Pseudomonas simiae WCS417 PS417_16935 diguanylate phosphodiesterase insig. 30 92
  Magnetospirillum magneticum AMB-1 AMB_RS16740 diguanylate phosphodiesterase insig. 31 91
  Magnetospirillum magneticum AMB-1 AMB_RS23225 GGDEF domain-containing protein insig. 32 56
o Pseudomonas syringae pv. syringae B728a Psyr_1293 EAL:Response regulator receiver insig. 28 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1293 EAL:Response regulator receiver insig. 28 97
  Pseudomonas fluorescens FW300-N2C3 AO356_26670 histidine kinase insig. 35 54
  Cupriavidus basilensis FW507-4G11 RR42_RS10855 diguanylate phosphodiesterase insig. 28 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03092 Protein-glutamate methylesterase/protein-glutamine glutaminase cofit 28 92
  Pseudomonas putida KT2440 PP_3319 Sensory box protein/GGDEF domain protein insig. 35 56
  Pseudomonas fluorescens SBW25 PFLU_RS05370 EAL domain-containing protein insig. 34 58
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05370 EAL domain-containing protein insig. 34 58
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 34 57
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 34 57
  Pseudomonas fluorescens FW300-N2E3 AO353_27105 diguanylate cyclase insig. 33 61
  Pseudomonas syringae pv. syringae B728a Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 34 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 34 58
  Pseudomonas fluorescens SBW25 PFLU_RS07895 EAL domain-containing protein insig. 31 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07895 EAL domain-containing protein sig. 31 82
  Alteromonas macleodii MIT1002 MIT1002_01871 Bacteriophytochrome cph2 cofit 33 56
  Rhodopseudomonas palustris CGA009 TX73_021600 EAL domain-containing protein insig. 32 59
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4602 Sensory box/GGDEF family protein insig. 36 56
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 33 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 57
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 57
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 31 59
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 56
  Pseudomonas fluorescens FW300-N2E3 AO353_17145 diguanylate phosphodiesterase insig. 33 61
  Cupriavidus basilensis FW507-4G11 RR42_RS37310 diguanylate cyclase insig. 31 64
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 31 60
  Methylophilus sp. DMC18 GFF393 hypothetical protein cofit 30 62
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 31 57
  Pseudomonas sp. DMC3 GFF2190 putative signaling protein insig. 33 60
  Rhodospirillum rubrum S1H Rru_A3560 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 31 59
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 34 54
  Methylophilus sp. DMC18 GFF394 hypothetical protein insig. 30 62
  Cupriavidus basilensis FW507-4G11 RR42_RS09710 hypothetical protein insig. 29 90
  Caulobacter crescentus NA1000 CCNA_00900 CHASE4-family GGDEF/EAL protein insig. 33 56
  Caulobacter crescentus NA1000 Δfur CCNA_00900 CHASE4-family GGDEF/EAL protein cofit 33 56
  Pseudomonas aeruginosa PA14 IKLFDK_16980 Uncharacterized signaling protein PA3311 insig. 33 62
  Methylophilus sp. DMC18 GFF2168 hypothetical protein insig. 33 61
  Ralstonia sp. UNC404CL21Col ABZR87_RS19215 EAL domain-containing protein cofit 32 57
  Pseudomonas aeruginosa MRSN321 DY961_RS00310 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 62
  Pseudomonas aeruginosa PUPa3 DQ20_RS40705 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 62
  Pseudomonas sp. RS175 PFR28_02059 Oxygen sensor protein DosP insig. 33 58
  Ralstonia solanacearum PSI07 RPSI07_RS05310 PAS domain S-box protein cofit 32 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS04535 EAL domain-containing protein insig. 27 93
  Klebsiella pneumoniae MKP103 KDGMDA_25960 GGDEF-domain containing protein insig. 36 55
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 35 57
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 33 56
  Marinobacter adhaerens HP15 HP15_3533 response regulator receiver (CheY-like) modulated diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 56
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 32 66
  Pseudomonas fluorescens SBW25 PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 32 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 32 56
o Xanthobacter sp. DMC5 GFF4525 Regulator of RpoS insig. 29 95
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 34 59
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 33 54
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 31 56
  Shewanella amazonensis SB2B Sama_0965 GGDEF domain-containing protein (RefSeq) sig. 31 61
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 29 77
  Rhizobium sp. OAE497 ABIE40_RS05110 EAL domain-containing protein insig. 28 63
  Pseudomonas fluorescens SBW25 PFLU_RS15265 EAL domain-containing response regulator insig. 27 92
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15265 EAL domain-containing response regulator insig. 27 92
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 33 57
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 33 60
  Agrobacterium fabrum C58 Atu3244 diguanylate cyclase insig. 32 55
  Rhizobium sp. OAE497 ABIE40_RS27590 EAL domain-containing protein insig. 33 60
  Kangiella aquimarina DSM 16071 B158DRAFT_0054 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 32 61
  Methylophilus sp. DMC18 GFF1786 hypothetical protein insig. 30 58
  Synechocystis sp000284455 PCC 6803 SGL_RS06175 EAL domain-containing protein insig. 35 55
  Magnetospirillum magneticum AMB-1 AMB_RS24520 phosphodiesterase cofit 30 58
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 34 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3221 Sensory box/GGDEF family protein insig. 35 55
  Pseudomonas sp. SVBP6 COO64_RS14580 bifunctional diguanylate cyclase/phosphodiesterase insig. 33 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 53
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 32 56
  Enterobacter asburiae PDN3 EX28DRAFT_1011 FOG: EAL domain insig. 31 57
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 35 54
  Marinobacter adhaerens HP15 HP15_3631 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 58
  Ralstonia solanacearum GMI1000 RS_RS18380 sensor domain-containing diguanylate cyclase strong 32 57
  Ralstonia solanacearum PSI07 RPSI07_RS00975 sensor domain-containing diguanylate cyclase cofit 32 57