Homologs of Dshi_2874 from Dinoroseobacter shibae DFL-12

Citrate (pro-3S)-lyase (RefSeq)
SEED: L-malyl-CoA/beta-methylmalyl-CoA lyase (EC 4.1.3.-)
KEGG: (3S)-malyl-CoA thioesterase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_2874 Citrate (pro-3S)-lyase (RefSeq) sig. 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c03680 (3S)-malyl-CoA thioesterase [EC:3.1.2.30] (from data) strong 68 98
o Azospirillum brasilense Sp245 AZOBR_RS14115 (3S)-malyl-CoA thiolesterase insig. 54 97
o Magnetospirillum magneticum AMB-1 AMB_RS19980 CoA ester lyase insig. 51 97
o Azospirillum sp. SherDot2 MPMX19_00611 (3S)-malyl-CoA thioesterase insig. 56 96
o Rhodospirillum rubrum S1H Rru_A1200 Citrate lyase (NCBI) strong 51 97
o Bosea sp. OAE506 ABIE41_RS08145 CoA ester lyase insig. 51 95
o Cupriavidus basilensis FW507-4G11 RR42_RS24350 malyl-CoA thiolesterase sig. 46 98
o Rhodopseudomonas palustris CGA009 TX73_001205 CoA ester lyase insig. 45 95
o Caulobacter crescentus NA1000 CCNA_03774 citrate lyase beta chain/citryl-CoA lyase subunit insig. 47 97
o Caulobacter crescentus NA1000 Δfur CCNA_03774 citrate lyase beta chain/citryl-CoA lyase subunit cofit 47 97
o Agrobacterium fabrum C58 Atu2788 citrate lyase, beta subunit insig. 44 95
o Rhizobium sp. OAE497 ABIE40_RS19025 CoA ester lyase insig. 45 94
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01015 CoA ester lyase insig. 46 95
o Sinorhizobium meliloti 1021 SMc03793 citrate lyase subunit beta insig. 45 98
o Kangiella aquimarina DSM 16071 B158DRAFT_1401 Citrate lyase beta subunit insig. 38 89
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4528 Citrate lyase beta chain (EC 4.1.3.6) insig. 35 95
o Escherichia coli BL21 ECD_00584 citrate lyase, citryl-ACP lyase (beta) subunit insig. 34 95
o Escherichia fergusonii Becca EFB2_03475 Citrate lyase subunit beta insig. 34 95
o Escherichia coli ECOR27 NOLOHH_23830 citE citrate lyase subunit beta no data 34 95
o Escherichia coli ECOR38 HEPCGN_00820 citE citrate (pro-3S)-lyase subunit beta cofit 34 95
o Escherichia coli ECRC101 OKFHMN_07455 citE citrate (pro-3S)-lyase subunit beta insig. 34 95
o Escherichia coli ECRC101 MCAODC_26670 citE citrate (pro-3S)-lyase subunit beta insig. 34 95
o Escherichia coli ECRC62 BNILDI_21840 citE citrate (pro-3S)-lyase subunit beta insig. 34 95
o Escherichia coli ECRC98 JDDGAC_11100 citE citrate (pro-3S)-lyase subunit beta no data 34 95
o Escherichia coli ECRC99 KEDOAH_20515 citE citrate (pro-3S)-lyase subunit beta no data 34 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03089 Citrate lyase subunit beta insig. 34 95
o Escherichia coli Nissle 1917 ECOLIN_RS03365 citrate (pro-3S)-lyase subunit beta no data 34 95
o Escherichia coli BW25113 b0616 citE citrate lyase beta chain (acyl lyase subunit) (VIMSS) insig. 34 95
  Fusobacterium nucleatum SB010 HUW76_08610 citrate (pro-3S)-lyase subunit beta strong 32 95
o Escherichia coli ECRC102 NIAGMN_05510 citE citrate lyase subunit beta insig. 34 95
o Serratia liquefaciens MT49 IAI46_16995 citrate (pro-3S)-lyase subunit beta insig. 34 95
  Bosea sp. OAE506 ABIE41_RS14130 CoA ester lyase no data 37 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS33980 CoA ester lyase insig. 34 96
o Acinetobacter radioresistens SK82 MPMX26_00847 (3S)-malyl-CoA thioesterase no data 34 93
o Rahnella sp. WP5 EX31_RS17795 citrate (pro-3S)-lyase subunit beta insig. 34 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0896 Citrate lyase beta subunit insig. 39 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_04125 citrate (pro-3S)-lyase subunit beta cofit 34 94
  Rhodospirillum rubrum S1H Rru_A0217 Citrate lyase (NCBI) strong 34 96
o Klebsiella michiganensis M5al BWI76_RS04445 citrate (pro-3S)-lyase subunit beta insig. 32 93
  Rhodopseudomonas palustris CGA009 TX73_023685 CoA ester lyase insig. 35 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF220 Citrate lyase beta chain (EC 4.1.3.6) insig. 32 93
  Azospirillum sp. SherDot2 MPMX19_03124 Citrate lyase subunit beta insig. 33 94
o Variovorax sp. SCN45 GFF4289 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) no data 39 93
o Enterobacter sp. TBS_079 MPMX20_03825 Citrate lyase subunit beta sig. 34 94
  Dinoroseobacter shibae DFL-12 Dshi_3050 Citrate (pro-3S)-lyase (RefSeq) strong 32 95
  Azospirillum brasilense Sp245 AZOBR_RS25430 Citrate lyase insig. 36 91
o Enterobacter asburiae PDN3 EX28DRAFT_3005 citrate lyase, beta subunit insig. 34 94
o Dickeya dianthicola 67-19 HGI48_RS09800 citrate (pro-3S)-lyase subunit beta insig. 34 94
o Dickeya dianthicola ME23 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta insig. 34 94
o Dickeya dadantii 3937 DDA3937_RS07835 citrate (pro-3S)-lyase subunit beta no data 34 94
  Dickeya dadantii 3937 DDA3937_RS09785 citrate (pro-3S)-lyase subunit beta insig. 34 94
o Pectobacterium carotovorum WPP14 HER17_RS12170 citrate (pro-3S)-lyase subunit beta cofit 33 94
  Phaeobacter inhibens DSM 17395 PGA1_c30490 Malyl-CoA lyase (EC 4.1.3.24) (from data) strong 32 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14500 CoA ester lyase insig. 36 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3671 Citrate lyase beta subunit sig. 35 93
  Variovorax sp. SCN45 GFF2372 Similar to citrate lyase beta chain, 3 insig. 36 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS12140 CoA ester lyase insig. 32 95
  Cupriavidus basilensis FW507-4G11 RR42_RS25095 citryl-CoA lyase insig. 29 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05549 citrate lyase subunit beta / citryl-CoA lyase insig. 34 94
  Dinoroseobacter shibae DFL-12 Dshi_2490 Citryl-CoA lyase (RefSeq) insig. 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS19830 CoA ester lyase insig. 37 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3075 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) insig. 32 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02940 beta-methylmalyl-CoA/L-malyl-CoA lyase (EC 4.1.3.24) insig. 31 94
  Pseudomonas syringae pv. syringae B728a Psyr_2171 HpcH/HpaI aldolase sig. 36 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2171 HpcH/HpaI aldolase insig. 36 93
  Burkholderia phytofirmans PsJN BPHYT_RS32670 aldolase insig. 35 93
o Pseudomonas simiae WCS417 PS417_14915 host specificity protein insig. 36 92
  Azospirillum brasilense Sp245 AZOBR_RS31565 hypothetical protein insig. 35 92
  Cupriavidus basilensis FW507-4G11 RR42_RS24325 citryl-CoA lyase insig. 32 91
  Azospirillum brasilense Sp245 AZOBR_RS17450 putative SIMILAR TO BETA SUBuniT OF CITRATE LYASE protein no data 32 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5615 Citrate lyase beta chain (EC 4.1.3.6) no data 34 93
  Burkholderia phytofirmans PsJN BPHYT_RS03015 aldolase sig. 33 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5660 Citrate lyase beta chain (EC 4.1.3.6) no data 32 94
o Pseudomonas fluorescens SBW25 PFLU_RS16935 CoA ester lyase cofit 36 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16935 CoA ester lyase strong 36 96
  Azospirillum brasilense Sp245 AZOBR_RS26360 Citrate lyase insig. 33 94
  Pseudomonas stutzeri RCH2 Psest_2665 Citrate lyase beta subunit no data 36 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF889 Citrate lyase beta chain (EC 4.1.3.6) insig. 35 88
  Dinoroseobacter shibae DFL-12 Dshi_1045 HpcH/HpaI aldolase (RefSeq) insig. 34 89
  Castellaniella sp019104865 MT123 ABCV34_RS09445 CoA ester lyase insig. 32 93
  Variovorax sp. SCN45 GFF817 Similar to citrate lyase beta chain, 3 no data 32 91
  Herbaspirillum seropedicae SmR1 HSERO_RS14045 aldolase insig. 32 94
  Azospirillum sp. SherDot2 MPMX19_06985 L-malyl-CoA/beta-methylmalyl-CoA lyase insig. 33 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1831 Citrate lyase beta chain (EC 4.1.3.6) insig. 32 95
  Phocaeicola dorei CL03T12C01 ABI39_RS11090 CoA ester lyase cofit 24 94
  Variovorax sp. OAS795 ABID97_RS26045 CoA ester lyase no data 32 98
  Cupriavidus basilensis FW507-4G11 RR42_RS36610 host specificity protein insig. 33 93
  Castellaniella sp019104865 MT123 ABCV34_RS07650 CoA ester lyase insig. 31 93
  Variovorax sp. OAS795 ABID97_RS12445 CoA ester lyase no data 34 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS39300 CoA ester lyase no data 32 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0570 Citrate lyase beta subunit insig. 35 94
  Bosea sp. OAE506 ABIE41_RS15850 CoA ester lyase sig. 28 91
  Pseudomonas fluorescens FW300-N2C3 AO356_28780 host specificity protein no data 29 92
  Serratia liquefaciens MT49 IAI46_16115 CoA ester lyase insig. 31 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04205 CoA ester lyase insig. 29 97
  Mycobacterium tuberculosis H37Rv Rv2498c Probable citrate (pro-3S)-lyase (beta subunit) CitE (citrase) (citratase) (citritase) (citridesmolase) (citrase aldolase) insig. 33 85
  Magnetospirillum magneticum AMB-1 AMB_RS20125 CoA ester lyase cofit 27 99
  Caulobacter crescentus NA1000 CCNA_03094 citrate lyase beta subunit insig. 28 94
  Caulobacter crescentus NA1000 Δfur CCNA_03094 citrate lyase beta subunit cofit 28 94