Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Bacteroides thetaiotaomicron VPI-5482 | BT1187 | | transcriptional regulator (NCBI ptt file) | insig. | 100 | 100 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03043 | | transcriptional regulator, effector binding domain protein | insig. | 77 | 97 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4142 | | conserved hypothetical protein (NCBI ptt file) | insig. | 39 | 92 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02560 | | pyridoxamine 5'-phosphate oxidase family protein | strong | 38 | 51 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS01855 | | pyridoxamine 5'-phosphate oxidase family protein | insig. | 30 | 81 |
| Bacteroides ovatus ATCC 8483 | BACOVA_05298 | | hypothetical protein | insig. | 34 | 50 |
| Bacteroides thetaiotaomicron VPI-5482 | BT4495 | | conserved hypothetical protein (NCBI ptt file) | insig. | 34 | 50 |
| Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 46 | 39 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 46 | 39 |
| Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 44 | 39 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1904 | | transcriptional regulator, AraC-type (NCBI ptt file) | insig. | 35 | 45 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4190 | | transcriptional regulator, AraC family | insig. | 32 | 47 |
| Bacteroides stercoris CC31F | HMPREF1181_RS07810 | | AraC family transcriptional regulator | insig. | 35 | 44 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23330 | | AraC family transcriptional regulator | insig. | 38 | 35 |
| Pantoea sp. MT58 | IAI47_05640 | | helix-turn-helix transcriptional regulator | insig. | 35 | 46 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01480 | | transcriptional regulator, effector binding domain protein | insig. | 34 | 45 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS37540 | | AraC family transcriptional regulator | cofit | 30 | 45 |
| Escherichia coli BL21 | ECD_03934 | | superoxide response regulon transcriptional activator; autoregulator | insig. | 38 | 37 |
| Escherichia fergusonii Becca | EFB2_04529 | | Regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECOR27 | NOLOHH_05125 | soxS_A12S | regulatory protein SoxS | cofit | 38 | 37 |
| Escherichia coli ECOR38 | HEPCGN_11490 | soxS_A12S | regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECRC101 | OKFHMN_12875 | soxS_A12S | regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECRC101 | MCAODC_03385 | soxS_A12S | regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECRC102 | NIAGMN_10720 | soxS_A12S | regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECRC62 | BNILDI_06400 | soxS_A12S | regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli ECRC98 | JDDGAC_16510 | soxS_A12S | regulatory protein SoxS | no data | 38 | 37 |
| Escherichia coli ECRC99 | KEDOAH_15275 | soxS_A12S | regulatory protein SoxS | no data | 38 | 37 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03979 | | Regulatory protein SoxS | insig. | 38 | 37 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23505 | | superoxide response transcriptional regulator SoxS | no data | 38 | 37 |
| Escherichia coli BW25113 | b4062 | soxS | DNA-binding transcriptional dual regulator (NCBI) | strong | 38 | 37 |
| Ralstonia solanacearum GMI1000 | RS_RS00650 | | AraC family transcriptional regulator | insig. | 36 | 35 |
| Serratia liquefaciens MT49 | IAI46_07760 | | helix-turn-helix domain-containing protein | insig. | 37 | 38 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4242 | | AraC-type DNA-binding domain-containing proteins | insig. | 37 | 36 |
| Enterobacter sp. TBS_079 | MPMX20_00281 | | Regulatory protein SoxS | strong | 37 | 36 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1441 | | Regulatory protein SoxS | insig. | 37 | 37 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03396 | | AraC-type DNA-binding protein | insig. | 31 | 43 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS05545 | | AraC family transcriptional regulator | insig. | 36 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_28535 | | AraC family transcriptional regulator | insig. | 34 | 38 |
| Escherichia coli BL21 | ECD_04272 | | right oriC-binding transcriptional activator, AraC family | insig. | 30 | 41 |
| Escherichia coli ECOR27 | NOLOHH_03480 | robA | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 30 | 41 |
| Escherichia coli ECOR38 | HEPCGN_09155 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli ECRC101 | OKFHMN_11150 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli ECRC101 | MCAODC_01665 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli ECRC102 | NIAGMN_09000 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli ECRC62 | BNILDI_08120 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli ECRC98 | JDDGAC_14745 | robA | MDR efflux pump AcrAB transcriptional activator RobA | no data | 30 | 41 |
| Escherichia coli ECRC99 | KEDOAH_17005 | robA | MDR efflux pump AcrAB transcriptional activator RobA | no data | 30 | 41 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03665 | | Right origin-binding protein | insig. | 30 | 41 |
| Escherichia coli Nissle 1917 | ECOLIN_RS25230 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 30 | 41 |
| Escherichia coli BW25113 | b4396 | rob | DNA-binding transcriptional activator (NCBI) | strong | 30 | 41 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1064 | | Right origin-binding protein | insig. | 30 | 41 |
| Dickeya dadantii 3937 | DDA3937_RS18435 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 36 | 35 |
| Dickeya dianthicola 67-19 | HGI48_RS18365 | | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 36 | 35 |
| Dickeya dianthicola ME23 | DZA65_RS19505 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 36 | 35 |
| Azospirillum sp. SherDot2 | MPMX19_02438 | | DNA gyrase inhibitor | insig. | 31 | 38 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1576 | | transcriptional regulator, AraC family (RefSeq) | insig. | 29 | 51 |
| Rhizobium sp. OAE497 | ABIE40_RS10300 | | AraC family transcriptional regulator | insig. | 29 | 44 |
| Escherichia fergusonii Becca | EFB2_04048 | | Right origin-binding protein | insig. | 30 | 41 |
| Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 33 | 43 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3606 | | AraC-type DNA-binding domain-containing proteins | insig. | 30 | 41 |
| Enterobacter sp. TBS_079 | MPMX20_00703 | | Right origin-binding protein | sig. | 30 | 41 |
| Burkholderia phytofirmans PsJN | BPHYT_RS34420 | | AraC family transcriptional regulator | insig. | 36 | 36 |
| Pantoea sp. MT58 | IAI47_16240 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 34 | 33 |
| Pantoea sp. MT58 | IAI47_03485 | | helix-turn-helix domain-containing protein | insig. | 32 | 42 |
| Paraburkholderia graminis OAS925 | ABIE53_004694 | | AraC family transcriptional regulator | insig. | 39 | 35 |
| Bifidobacterium breve UCC2003 | BBR_RS14340 | | helix-turn-helix domain-containing protein | insig. | 31 | 51 |
| Pseudomonas putida KT2440 | PP_2173 | | Transcriptional regulator, AraC family | sig. | 32 | 36 |
| Bosea sp. OAE506 | ABIE41_RS18945 | | AraC family transcriptional regulator | insig. | 30 | 44 |
| Klebsiella michiganensis M5al | BWI76_RS04205 | | right oriC-binding transcriptional activator | sig. | 30 | 41 |
| Rhodospirillum rubrum S1H | Rru_A0536 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 26 | 74 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 35 | 35 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1249 | | Transcriptional regulator, AraC family | insig. | 31 | 39 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10040 | | AraC family transcriptional regulator | insig. | 33 | 35 |
| Ralstonia solanacearum UW163 | UW163_RS03540 | | AraC family transcriptional regulator | insig. | 33 | 35 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03562 | | AraC family transcriptional regulator | insig. | 38 | 36 |
| Caulobacter crescentus NA1000 | CCNA_02611 | | AraC-family transcriptional regulator | insig. | 27 | 42 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02611 | | AraC-family transcriptional regulator | cofit | 27 | 42 |
| Pectobacterium carotovorum WPP14 | HER17_RS02770 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 34 | 35 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33620 | | GlxA family transcriptional regulator | insig. | 29 | 42 |
| Erwinia tracheiphila SCR3 | LU632_RS00855 | | helix-turn-helix domain-containing protein | insig. | 32 | 41 |
| Azospirillum brasilense Sp245 | AZOBR_RS00835 | | transcriptional regulator | insig. | 28 | 44 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2399.1 | | FIG024214: Transcriptional regulator, AraC family | insig. | 32 | 39 |
| Serratia liquefaciens MT49 | IAI46_11980 | | helix-turn-helix transcriptional regulator | insig. | 31 | 46 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2372 | | transcriptional regulator (NCBI ptt file) | sig. | 37 | 36 |
| Klebsiella michiganensis M5al | BWI76_RS01995 | | AraC family transcriptional regulator | insig. | 34 | 36 |
| Serratia liquefaciens MT49 | IAI46_03005 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 33 | 31 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20800 | | AraC family transcriptional regulator | insig. | 28 | 44 |
| Variovorax sp. SCN45 | GFF3429 | | Transcriptional regulator, AraC family | insig. | 37 | 34 |
| Pectobacterium carotovorum WPP14 | HER17_RS07425 | | helix-turn-helix domain-containing protein | insig. | 36 | 41 |
| Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 35 | 39 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3667 | | transcriptional regulator (NCBI ptt file) | insig. | 33 | 46 |
| Bosea sp. OAE506 | ABIE41_RS20340 | | AraC family transcriptional regulator | insig. | 30 | 44 |
| Rhodopseudomonas palustris CGA009 | TX73_010875 | | AraC family transcriptional regulator | insig. | 28 | 53 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17815 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 26 | 44 |
| Ralstonia solanacearum UW163 | UW163_RS21325 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 26 | 44 |
| Pseudomonas fluorescens SBW25 | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 35 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 35 |
| Agrobacterium fabrum C58 | Atu4659 | | AraC family transcriptional regulator | strong | 30 | 36 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26250 | | AraC family transcriptional regulator | insig. | 34 | 38 |
| Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 34 | 42 |