Conservation of cofitness between TX73_023385 and TX73_017390 in Rhodopseudomonas palustris CGA009

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_023385 propionyl-CoA synthetase 1.0 TX73_017390 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB 0.39 15
Bosea sp. OAE506 0.74 ABIE41_RS09315 propionyl-CoA synthetase 0.48 ABIE41_RS14185 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 77
Azospirillum brasilense Sp245 0.66 AZOBR_RS06340 acyl-CoA synthetase 0.39 AZOBR_RS11565 ribosomal large subunit pseudouridine synthase low > 97
Sinorhizobium meliloti 1021 0.65 SMc04095 acyl-COA synthetase 0.44 SMc01327 tRNA/rRNA methyltransferase low > 103
Magnetospirillum magneticum AMB-1 0.64 AMB_RS11645 propionyl-CoA synthetase 0.38 AMB_RS15870 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Dinoroseobacter shibae DFL-12 0.63 Dshi_0825 AMP-dependent synthetase and ligase (RefSeq) 0.32 Dshi_2571 RNA methyltransferase, TrmH family, group 3 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.62 PGA1_c11900 Propionate--CoA ligase (EC 6.2.1.17) (from data) 0.31 PGA1_c09200 putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 62
Shewanella sp. ANA-3 0.61 Shewana3_1675 AMP-dependent synthetase and ligase (RefSeq) 0.25 Shewana3_0698 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_2568 AMP-dependent synthetase and ligase (RefSeq) 0.24 Shew_3288 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.59 MIT1002_01463 Acetyl-coenzyme A synthetase 0.26 MIT1002_03605 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 70
Marinobacter adhaerens HP15 0.58 HP15_2053 PrpE protein 0.27 HP15_623 RNA methyltransferase, TrmH family, group 3 low > 73
Shewanella amazonensis SB2B 0.58 Sama_1364 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) 0.22 Sama_3066 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_06755 acetate--CoA ligase 0.24 CSW01_13150 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 62
Pseudomonas putida KT2440 0.52 PP_2351 propionyl-CoA synthetase 0.27 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 96
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_05523 propionyl-CoA synthetase (EC 6.2.1.17) 0.24 H281DRAFT_00713 23S rRNA Gm-2251 2'-O-methyltransferase low > 103
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS13560 propionyl-CoA synthetase 0.24 RR42_RS13060 23S rRNA methyltransferase low > 128
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS00715 propionate--CoA ligase 0.24 LRK54_RS00490 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 59
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS14155 propionate--CoA ligase 0.26 ABZR87_RS10990 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 80
Rhodanobacter denitrificans MT42 0.45 LRK55_RS00490 propionate--CoA ligase 0.24 LRK55_RS00230 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 63
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_06545 prpE propionate--CoA ligase 0.24 OKGIIK_06760 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 52
Ralstonia solanacearum PSI07 0.44 RPSI07_RS15240 propionate--CoA ligase 0.26 RPSI07_RS18025 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS15515 propionate--CoA ligase 0.25 UW163_RS12815 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS02205 propionate--CoA ligase 0.25 RALBFv3_RS15350 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2208 Propionate--CoA ligase (EC 6.2.1.17) 0.24 Ac3H11_4141 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) low > 79
Ralstonia solanacearum GMI1000 0.44 RS_RS07615 propionate--CoA ligase 0.26 RS_RS06160 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 80
Lysobacter sp. OAE881 0.43 ABIE51_RS06010 propionate--CoA ligase 0.19 ABIE51_RS07480 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 62
Castellaniella sp019104865 MT123 0.43 ABCV34_RS00670 propionate--CoA ligase 0.22 ABCV34_RS06630 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 48
Paraburkholderia graminis OAS925 0.43 ABIE53_002938 propionyl-CoA synthetase 0.23 ABIE53_001941 23S rRNA (guanosine2251-2'-O)-methyltransferase low > 113
Dechlorosoma suillum PS 0.43 Dsui_2925 propionate--CoA ligase 0.24 Dsui_1899 rRNA methylase, putative, group 3 low > 51
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS15645 acetyl-CoA synthetase 0.21 HSERO_RS09295 23S rRNA (guanosine-2'-O-)-methyltransferase low > 78
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS13830 acetyl-CoA synthetase 0.24 BPHYT_RS08460 23S rRNA (guanosine-2'-O-)-methyltransferase — —
Variovorax sp. SCN45 0.42 GFF978 Propionate--CoA ligase (EC 6.2.1.17) 0.24 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4880 Propionate--CoA ligase (EC 6.2.1.17) 0.24 GFF4838 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) low > 90
Variovorax sp. OAS795 0.42 ABID97_RS14140 propionate--CoA ligase 0.25 ABID97_RS14320 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 91
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS08500 propionate--CoA ligase 0.26 ABZR86_RS08265 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 74
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05120 propionate--CoA ligase 0.24 QEN71_RS22920 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 153
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4266 Propionate--CoA ligase (EC 6.2.1.17) 0.22 GFF833 '23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)' transl_table=11 low > 78
Escherichia coli Nissle 1917 0.40 ECOLIN_RS02165 propionate--CoA ligase 0.23 ECOLIN_RS24270 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 55
Escherichia coli ECRC62 0.40 BNILDI_23175 prpE propionate--CoA ligase 0.23 BNILDI_07010 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Escherichia coli ECOR27 0.40 NOLOHH_01760 prpE propionate--CoA ligase 0.23 NOLOHH_04480 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 75
Escherichia coli ECOR38 0.40 HEPCGN_07470 prpE propionate--CoA ligase 0.23 HEPCGN_10445 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 87
Escherichia fergusonii Becca 0.40 EFB2_03703 Acetyl-coenzyme A synthetase 0.23 EFB2_04355 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB low > 86
Escherichia coli BL21 0.40 ECD_00289 propionate--CoA ligase 0.23 ECD_04047 23S rRNA mG2251 2'-O-ribose methyltransferase, SAM-dependent low > 61
Escherichia coli BW25113 0.40 b0335 prpE predicted propionyl-CoA synthetase with ATPase domain (NCBI) 0.23 b4180 rlmB 23S rRNA (Gm2251)-methyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.40 NIAGMN_06940 prpE propionate--CoA ligase 0.23 NIAGMN_10065 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Escherichia coli ECRC101 0.40 MCAODC_28115 prpE propionate--CoA ligase 0.23 MCAODC_02730 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 87
Escherichia coli ECRC98 0.40 JDDGAC_12540 prpE propionate--CoA ligase 0.23 JDDGAC_15855 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 86
Escherichia coli ECRC100 0.40 OKFHMN_08885 prpE propionate--CoA ligase 0.23 OKFHMN_12215 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB low > 80
Escherichia coli ECRC99 0.39 KEDOAH_19080 prpE propionate--CoA ligase 0.23 KEDOAH_15940 rlmB 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03336 Acetyl-coenzyme A synthetase 0.23 OHPLBJKB_03862 '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11 low > 73

Not shown: 3 genomes with orthologs for TX73_023385 only; 32 genomes with orthologs for TX73_017390 only