Conservation of cofitness between TX73_023385 and TX73_010150 in Rhodopseudomonas palustris CGA009

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_023385 propionyl-CoA synthetase 1.0 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA 0.42 9
Bosea sp. OAE506 0.74 ABIE41_RS09315 propionyl-CoA synthetase 0.62 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA low > 77
Azospirillum sp. SherDot2 0.67 MPMX19_01753 Acetyl-coenzyme A synthetase 0.58 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase low > 112
Rhizobium sp. OAE497 0.66 ABIE40_RS19175 propionyl-CoA synthetase 0.55 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Azospirillum brasilense Sp245 0.66 AZOBR_RS06340 acyl-CoA synthetase 0.58 AZOBR_RS15935 tRNA-dihydrouridine synthase A low > 97
Sinorhizobium meliloti 1021 0.65 SMc04095 acyl-COA synthetase 0.46 SMc04235 tRNA-dihydrouridine synthase A low > 103
Dinoroseobacter shibae DFL-12 0.63 Dshi_0825 AMP-dependent synthetase and ligase (RefSeq) 0.49 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.62 Rru_A1046 AMP-dependent synthetase and ligase (NCBI) 0.50 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.62 PGA1_c11900 Propionate--CoA ligase (EC 6.2.1.17) (from data) 0.49 PGA1_c19230 tRNA-dihydrouridine synthase A low > 62
Shewanella sp. ANA-3 0.61 Shewana3_1675 AMP-dependent synthetase and ligase (RefSeq) 0.56 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) low > 73
Shewanella loihica PV-4 0.59 Shew_2568 AMP-dependent synthetase and ligase (RefSeq) 0.56 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.59 MIT1002_01463 Acetyl-coenzyme A synthetase 0.51 MIT1002_03387 putative tRNA-dihydrouridine synthase low > 70
Marinobacter adhaerens HP15 0.58 HP15_2053 PrpE protein 0.51 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN low > 73
Shewanella amazonensis SB2B 0.58 Sama_1364 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) 0.57 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_06755 acetate--CoA ligase 0.57 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA low > 62
Pseudomonas putida KT2440 0.52 PP_2351 propionyl-CoA synthetase 0.51 PP_2169 tRNA-dihydrouridine synthase A low > 96
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_05523 propionyl-CoA synthetase (EC 6.2.1.17) 0.50 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase low > 103
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS13560 propionyl-CoA synthetase 0.49 RR42_RS12665 tRNA-dihydrouridine synthase A low > 128
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS00715 propionate--CoA ligase 0.55 LRK54_RS05995 tRNA dihydrouridine(20/20a) synthase DusA 0.50 14
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS14155 propionate--CoA ligase 0.50 ABZR87_RS11300 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Rhodanobacter denitrificans MT42 0.45 LRK55_RS00490 propionate--CoA ligase 0.55 LRK55_RS05750 tRNA dihydrouridine(20/20a) synthase DusA low > 63
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_06545 prpE propionate--CoA ligase 0.55 OKGIIK_00625 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 52
Ralstonia solanacearum PSI07 0.44 RPSI07_RS15240 propionate--CoA ligase 0.49 RPSI07_RS17630 tRNA dihydrouridine(20/20a) synthase DusA low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS15515 propionate--CoA ligase 0.49 UW163_RS13175 tRNA dihydrouridine(20/20a) synthase DusA — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS02205 propionate--CoA ligase 0.49 RALBFv3_RS15730 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2208 Propionate--CoA ligase (EC 6.2.1.17) 0.48 Ac3H11_2288 tRNA dihydrouridine synthase A low > 79
Ralstonia solanacearum GMI1000 0.44 RS_RS07615 propionate--CoA ligase 0.51 RS_RS06510 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Lysobacter sp. OAE881 0.43 ABIE51_RS06010 propionate--CoA ligase 0.53 ABIE51_RS03925 tRNA dihydrouridine(20/20a) synthase DusA low > 62
Castellaniella sp019104865 MT123 0.43 ABCV34_RS00670 propionate--CoA ligase 0.45 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA 0.52 24
Paraburkholderia graminis OAS925 0.43 ABIE53_002938 propionyl-CoA synthetase 0.49 ABIE53_001975 tRNA-dihydrouridine synthase A low > 113
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS15645 acetyl-CoA synthetase 0.52 HSERO_RS17905 tRNA-dihydrouridine synthase A low > 78
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS13830 acetyl-CoA synthetase 0.51 BPHYT_RS08700 tRNA-dihydrouridine synthase A low > 109
Variovorax sp. SCN45 0.42 GFF978 Propionate--CoA ligase (EC 6.2.1.17) 0.47 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4880 Propionate--CoA ligase (EC 6.2.1.17) 0.48 GFF4791 tRNA dihydrouridine synthase A low > 90
Variovorax sp. OAS795 0.42 ABID97_RS14140 propionate--CoA ligase 0.49 ABID97_RS13915 tRNA dihydrouridine(20/20a) synthase DusA low > 91
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS08500 propionate--CoA ligase 0.55 ABZR86_RS18350 tRNA dihydrouridine(20/20a) synthase DusA low > 74
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS05120 propionate--CoA ligase 0.53 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA 0.51 20
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4266 Propionate--CoA ligase (EC 6.2.1.17) 0.54 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) low > 78
Escherichia coli Nissle 1917 0.40 ECOLIN_RS02165 propionate--CoA ligase 0.55 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA low > 55
Escherichia coli ECOR27 0.40 NOLOHH_01760 prpE propionate--CoA ligase 0.55 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli ECRC62 0.40 BNILDI_23175 prpE propionate--CoA ligase 0.55 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli ECOR38 0.40 HEPCGN_07470 prpE propionate--CoA ligase 0.55 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia fergusonii Becca 0.40 EFB2_03703 Acetyl-coenzyme A synthetase 0.54 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Escherichia coli BW25113 0.40 b0335 prpE predicted propionyl-CoA synthetase with ATPase domain (NCBI) 0.54 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) 0.17 56
Escherichia coli BL21 0.40 ECD_00289 propionate--CoA ligase 0.54 ECD_03921 tRNA-dihydrouridine synthase A low > 61
Escherichia coli ECRC98 0.40 JDDGAC_12540 prpE propionate--CoA ligase 0.55 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 86
Escherichia coli ECRC102 0.40 NIAGMN_06940 prpE propionate--CoA ligase 0.55 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC100 0.40 OKFHMN_08885 prpE propionate--CoA ligase 0.55 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECRC101 0.40 MCAODC_28115 prpE propionate--CoA ligase 0.54 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECRC99 0.39 KEDOAH_19080 prpE propionate--CoA ligase 0.55 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03336 Acetyl-coenzyme A synthetase 0.55 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase low > 73

Not shown: 2 genomes with orthologs for TX73_023385 only; 33 genomes with orthologs for TX73_010150 only