Conservation of cofitness between TX73_006200 and TX73_003800 in Rhodopseudomonas palustris CGA009

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_006200 sigma-54-dependent Fis family transcriptional regulator 1.0 TX73_003800 formate dehydrogenase accessory sulfurtransferase FdhD 0.30 15
Variovorax sp. SCN45 0.35 GFF6444 no description 0.29 GFF5642 Sulfur carrier protein FdhD — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS28085 Fis family transcriptional regulator 0.32 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD low > 109
Serratia liquefaciens MT49 0.32 IAI46_12320 sigma-54-dependent Fis family transcriptional regulator 0.35 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD low > 86
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS34270 Fis family transcriptional regulator 0.41 RR42_RS03765 formate dehydrogenase low > 128
Variovorax sp. OAS795 0.32 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator 0.11 ABID97_RS07590 formate dehydrogenase accessory sulfurtransferase FdhD low > 91
Paraburkholderia graminis OAS925 0.32 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism 0.31 ABIE53_000787 FdhD protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family 0.35 H281DRAFT_06437 FdhD protein low > 103
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS12445 sigma-54-dependent Fis family transcriptional regulator 0.31 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5398 Nitrogen regulation protein NR(I) 0.14 GFF1188 Formate dehydrogenase chain D (EC 1.2.1.2) low > 90
Klebsiella michiganensis M5al 0.31 BWI76_RS21990 ATPase AAA 0.33 BWI76_RS00475 sulfurtransferase FdhD low > 92
Castellaniella sp019104865 MT123 0.30 ABCV34_RS02700 sigma-54-dependent Fis family transcriptional regulator 0.30 ABCV34_RS00240 formate dehydrogenase accessory sulfurtransferase FdhD low > 48
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS15930 sigma-54-dependent Fis family transcriptional regulator 0.34 ABZR87_RS19685 formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09475 Fis family transcriptional regulator 0.42 HSERO_RS07435 formate dehydrogenase accessory protein FdhD low > 78
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4391 Transcriptional activator of acetoin/glycerol metabolism 0.11 Ac3H11_3797 Formate dehydrogenase chain D (EC 1.2.1.2) low > 79
Pseudomonas putida KT2440 0.30 PP_0546 sigma-54 dependent transcriptional regulator 0.30 PP_0257 protein sulfur transferase low > 96
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.877.1 hypothetical protein 0.36 Xcc-8004.2194.1 Formate dehydrogenase chain D (EC 1.2.1.2) low > 74
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_19490 Fis family transcriptional regulator 0.31 AO353_11830 formate dehydrogenase family accessory protein FdhD low > 101
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_175 sigma-54 dependent transcriptional regulator 0.30 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Pseudomonas sp. RS175 0.28 PFR28_03884 Acetoin catabolism regulatory protein 0.30 PFR28_04882 Sulfur carrier protein FdhD low > 88
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2355 sigma-54 dependent transcriptional regulator 0.30 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Pseudomonas simiae WCS417 0.28 PS417_24805 Fis family transcriptional regulator 0.29 PS417_01270 iron ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_15230 Fis family transcriptional regulator 0.30 AO356_10100 formate dehydrogenase family accessory protein FdhD low > 104
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS07820 sigma-54-dependent Fis family transcriptional regulator 0.35 RALBFv3_RS18750 sulfurtransferase FdhD — —
Marinobacter adhaerens HP15 0.27 HP15_2165 sigma-54 dependent transcriptional regulator 0.38 HP15_4175 formate dehydrogenase, subunit FdhD low > 73
Ralstonia solanacearum PSI07 0.27 RPSI07_RS09460 sigma-54-dependent Fis family transcriptional regulator 0.34 RPSI07_RS04845 sulfurtransferase FdhD low > 81
Pseudomonas fluorescens SBW25 0.27 PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator 0.28 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator 0.28 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4981 Nitrogen regulation protein NR(I) 0.30 Pf6N2E2_3890 Formate dehydrogenase chain D (EC 1.2.1.2) low > 103
Ralstonia solanacearum GMI1000 0.26 RS_RS15720 sigma-54-dependent Fis family transcriptional regulator 0.33 RS_RS22200 sulfurtransferase FdhD — —
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1736 Helix-turn-helix, Fis-type 0.28 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1736 Helix-turn-helix, Fis-type 0.28 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Shewanella loihica PV-4 0.26 Shew_3573 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) 0.14 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) low > 60
Azospirillum sp. SherDot2 0.25 MPMX19_01661 Acetoin catabolism regulatory protein 0.40 MPMX19_03504 Sulfur carrier protein FdhD low > 112
Shewanella sp. ANA-3 0.25 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) 0.31 Shewana3_0108 formate dehydrogenase accessory protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) 0.30 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.24 Sama_3434 sigma-54 dependent transcriptional regulator (RefSeq) 0.13 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) low > 62
Azospirillum brasilense Sp245 0.23 AZOBR_RS04785 ATPase AAA 0.38 AZOBR_RS18415 formate dehydrogenase accessory protein FdhD low > 97
Agrobacterium fabrum C58 0.22 Atu4741 transcriptional regulator 0.48 Atu2619 NAD-dependent formate dehydrogenase, C subunit protein low > 89
Sinorhizobium meliloti 1021 0.22 SM_b20102 acetoin catabolism regulatory protein 0.50 SMc03085 formate dehydrogenase accessory protein low > 103

Not shown: 6 genomes with orthologs for TX73_006200 only; 37 genomes with orthologs for TX73_003800 only