Conservation of cofitness between TX73_002965 and TX73_002255 in Rhodopseudomonas palustris CGA009

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_002965 ActS/PrrB/RegB family redox-sensitive histidine kinase 1.0 TX73_002255 tRNA pseudouridine(55) synthase TruB 0.59 2
Bosea sp. OAE506 0.44 ABIE41_RS03880 ActS/PrrB/RegB family redox-sensitive histidine kinase 0.51 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB low > 77
Sinorhizobium meliloti 1021 0.42 SMc02585 sensor histidine kinase transmembrane protein 0.47 SMc00321 tRNA pseudouridine synthase B — —
Rhizobium sp. OAE497 0.38 ABIE40_RS19510 ActS/PrrB/RegB family redox-sensitive histidine kinase 0.46 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB low > 107
Agrobacterium fabrum C58 0.36 Atu0051 two component sensor kinase 0.46 Atu0085 tRNA pseudouridine 55 synthase low > 89
Phaeobacter inhibens DSM 17395 0.33 PGA1_c35370 sensor histidine kinase RegB 0.36 PGA1_c32950 tRNA pseudouridine synthase B low > 62
Dinoroseobacter shibae DFL-12 0.31 Dshi_3432 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.36 Dshi_3042 tRNA pseudouridine synthase B (RefSeq) low > 64
Azospirillum sp. SherDot2 0.30 MPMX19_05622 Sensor histidine kinase RegB 0.41 MPMX19_02524 tRNA pseudouridine synthase B low > 112
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_00248 sensor histidine protein kinase 0.41 CCNA_00035 tRNA pseudouridine synthase B low > 67
Caulobacter crescentus NA1000 0.28 CCNA_00248 sensor histidine protein kinase 0.41 CCNA_00035 tRNA pseudouridine synthase B low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS15070 ActS/PrrB/RegB family redox-sensitive histidine kinase 0.36 A4249_RS13345 tRNA pseudouridine(55) synthase TruB low > 48
Lysobacter sp. OAE881 0.16 ABIE51_RS09790 ATP-binding protein 0.25 ABIE51_RS08405 tRNA pseudouridine(55) synthase TruB 0.55 60
Variovorax sp. SCN45 0.16 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.24 GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) low > 127
Variovorax sp. OAS795 0.16 ABID97_RS07615 ATP-binding protein 0.25 ABID97_RS16475 tRNA pseudouridine(55) synthase TruB low > 91
Acidovorax sp. GW101-3H11 0.16 Ac3H11_3146 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.20 Ac3H11_2865 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 79
Dechlorosoma suillum PS 0.15 Dsui_1181 signal transduction histidine kinase 0.26 Dsui_2720 tRNA pseudouridine 55 synthase low > 51
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS12295 histidine kinase 0.24 HSERO_RS17985 tRNA pseudouridine synthase B low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.14 Psyr_4231 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 0.27 Psyr_4178 tRNA pseudouridine synthase B low > 86
Pseudomonas syringae pv. syringae B728a 0.14 Psyr_4231 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 0.27 Psyr_4178 tRNA pseudouridine synthase B low > 86
Sphingomonas koreensis DSMZ 15582 0.13 Ga0059261_1561 Signal transduction histidine kinase 0.31 Ga0059261_2142 tRNA pseudouridine(55) synthase low > 68
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_05340 histidine kinase 0.27 AO353_05550 pseudouridine synthase low > 101
Paraburkholderia sabiae LMG 24235 0.13 QEN71_RS00320 ATP-binding protein 0.23 QEN71_RS23090 tRNA pseudouridine(55) synthase TruB — —
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_5049 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.27 PfGW456L13_5086 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 87
Ralstonia solanacearum PSI07 0.12 RPSI07_RS23755 sensor histidine kinase 0.24 RPSI07_RS17665 tRNA pseudouridine(55) synthase TruB low > 81
Paraburkholderia graminis OAS925 0.12 ABIE53_000419 two-component system sensor histidine kinase RegB 0.24 ABIE53_001832 tRNA pseudouridine55 synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_02209 two-component system, sensor histidine kinase RegB 0.23 H281DRAFT_05106 tRNA pseudouridine synthase B — —
Ralstonia solanacearum GMI1000 0.12 RS_RS00195 sensor histidine kinase 0.24 RS_RS06470 tRNA pseudouridine(55) synthase TruB low > 80
Ralstonia sp. UNC404CL21Col 0.12 ABZR87_RS05140 ATP-binding protein 0.24 ABZR87_RS11220 tRNA pseudouridine(55) synthase TruB low > 80
Ralstonia solanacearum UW163 0.12 UW163_RS03970 sensor histidine kinase 0.23 UW163_RS13150 tRNA pseudouridine(55) synthase TruB — —
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS01620 sensor histidine kinase 0.24 BPHYT_RS08080 tRNA pseudouridine synthase B low > 109
Ralstonia solanacearum IBSBF1503 0.12 RALBFv3_RS09610 sensor histidine kinase 0.24 RALBFv3_RS15690 tRNA pseudouridine(55) synthase TruB 0.31 71
Pseudomonas fluorescens FW300-N2C3 0.11 AO356_07210 histidine kinase 0.26 AO356_07400 pseudouridine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_3303 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.27 Pf6N2E2_3351 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 103
Pseudomonas stutzeri RCH2 0.11 Psest_3339 Signal transduction histidine kinase 0.28 Psest_0983 tRNA pseudouridine 55 synthase — —
Pseudomonas sp. RS175 0.11 PFR28_00136 Sensor histidine kinase RegB 0.27 PFR28_00092 tRNA pseudouridine synthase B — —
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS10110 ATP-binding protein 0.21 ABZR86_RS06015 tRNA pseudouridine(55) synthase TruB low > 74
Cupriavidus basilensis FW507-4G11 0.11 RR42_RS01090 histidine kinase 0.27 RR42_RS12835 tRNA pseudouridine synthase B low > 128
Pseudomonas sp. S08-1 0.11 OH686_08685 Sensor histidine kinase PrrB (RegB) 0.26 OH686_17155 tRNA pseudouridine(55) synthase low > 80
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS04035 ATP-binding protein 0.27 LRK54_RS01035 tRNA pseudouridine(55) synthase TruB low > 59
Rhodanobacter denitrificans MT42 0.09 LRK55_RS03805 histidine kinase dimerization/phospho-acceptor domain-containing protein 0.27 LRK55_RS00810 tRNA pseudouridine(55) synthase TruB low > 63
Rhodanobacter sp. FW510-T8 0.08 OKGIIK_10895 Histidine kinase 0.27 OKGIIK_05860 truB tRNA pseudouridine(55) synthase TruB low > 52
Xanthomonas campestris pv. campestris strain 8004 0.08 Xcc-8004.3040.1 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) 0.26 Xcc-8004.2004.1 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 74

Not shown: 1 genomes with orthologs for TX73_002965 only; 36 genomes with orthologs for TX73_002255 only