Conservation of cofitness between RR42_RS18900 and RR42_RS01980 in Cupriavidus basilensis FW507-4G11

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS18900 membrane protein 1.0 RR42_RS01980 peptidase M16 0.33 18
Ralstonia sp. UNC404CL21Col 0.84 ABZR87_RS02485 MarC family protein 0.62 ABZR87_RS06950 pitrilysin family protein low > 80
Ralstonia solanacearum GMI1000 0.84 RS_RS14775 membrane protein 0.60 RS_RS01910 insulinase family protein
Ralstonia solanacearum UW163 0.84 UW163_RS06785 membrane protein 0.61 UW163_RS02520 insulinase family protein
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS06830 membrane protein 0.61 RALBFv3_RS11060 insulinase family protein
Ralstonia solanacearum PSI07 0.80 RPSI07_RS10405 membrane protein 0.61 RPSI07_RS22240 insulinase family protein
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2153 Multiple antibiotic resistance (MarC) -related proteins 0.43 Ac3H11_3875 FIG015547: peptidase, M16 family low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1820 Multiple antibiotic resistance protein marC 0.38 GFF815 FIG015547: peptidase, M16 family low > 90
Variovorax sp. OAS795 0.48 ABID97_RS00755 MarC family protein 0.40 ABID97_RS23885 pitrilysin family protein low > 91
Variovorax sp. SCN45 0.48 GFF3614 UPF0056 inner membrane protein YchE 0.40 GFF2316 FIG015547: peptidase, M16 family low > 127
Shewanella amazonensis SB2B 0.42 Sama_1694 hypothetical protein (RefSeq) 0.22 Sama_3444 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.41 Shewana3_1789 hypothetical protein (RefSeq) 0.23 Shewana3_3940 peptidase M16 domain-containing protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.41 SO2137 conserved hypothetical protein TIGR00427 (NCBI ptt file) 0.23 SO4537.2 hypothetical Zn-dependent peptidase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.40 Shew_1911 hypothetical protein (RefSeq) 0.23 Shew_3581 peptidase M16 domain-containing protein (RefSeq)
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS01190 NAAT family transporter 0.19 ABI39_RS02105 insulinase family protein low > 72
Phaeobacter inhibens DSM 17395 0.30 PGA1_c19770 membrane protein, MarC family 0.26 PGA1_c32820 peptidase, M16 family low > 62
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS00315 NAAT family transporter 0.19 HMPREF1058_RS02765 insulinase family protein low > 67
Dinoroseobacter shibae DFL-12 0.27 Dshi_1348 multiple antibiotic resistance (MarC)-related protein (RefSeq) 0.22 Dshi_0361 peptidase M16 domain protein (RefSeq) low > 64
Agrobacterium fabrum C58 0.27 Atu1508 hypothetical protein 0.10 Atu0786 peptidase, family M16 low > 89
Rhodospirillum rubrum S1H 0.26 Rru_A0654 Multiple antibiotic resistance (MarC)-related proteins (NCBI) 0.28 Rru_A2972 Peptidase M16-like (NCBI) low > 58
Rhizobium sp. OAE497 0.25 ABIE40_RS09370 MarC family protein 0.11 ABIE40_RS04225 pitrilysin family protein low > 107
Bosea sp. OAE506 0.25 ABIE41_RS15150 MarC family protein 0.24 ABIE41_RS23245 pitrilysin family protein
Sinorhizobium meliloti 1021 0.24 SMc01232 hypothetical protein 0.11 SMc00451 processing protease low > 103
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_1365 Multiple antibiotic resistance (MarC)-related proteins 0.17 Synpcc7942_0376 pqqE putative zinc protease protein low > 38
Azospirillum brasilense Sp245 0.22 AZOBR_RS25935 antibiotic resistance protein 0.29 AZOBR_RS05060 zinc protease low > 97
Azospirillum sp. SherDot2 0.22 MPMX19_05023 hypothetical protein 0.29 MPMX19_00522 putative zinc protease low > 112
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.34 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_4409 Multiple antibiotic resistance (MarC)-related protein 0.34 Psyr_4752 Insulinase-like:Peptidase M16, C-terminal low > 86
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_60 membrane protein, MarC family 0.34 PfGW456L13_992 FIG015547: peptidase, M16 family low > 87
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_3525 membrane protein, MarC family 0.34 Pf6N2E2_4581 FIG015547: peptidase, M16 family low > 103
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_1320 membrane protein, MarC family 0.35 Pf1N1B4_2322 FIG015547: peptidase, M16 family low > 87
Pseudomonas sp. S08-1 0.21 OH686_07645 MarC family integral membrane protein 0.34 OH686_14230 peptidase, M16 family low > 80
Pseudomonas sp. RS175 0.21 PFR28_05211 hypothetical protein 0.33 PFR28_04260 putative zinc protease low > 88
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_08255 hypothetical protein 0.34 AO356_13330 peptidase M16 low > 104
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_13635 hypothetical protein 0.35 AO353_08255 peptidase M16 low > 101
Pseudomonas fluorescens SBW25 0.21 PFLU_RS03000 MarC family protein 0.34 PFLU_RS28460 insulinase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS03000 MarC family protein 0.34 PFLU_RS28460 insulinase family protein low > 109
Pseudomonas putida KT2440 0.21 PP_4825 Membrane protein, MarC family 0.34 PP_5112 putative processin peptidase low > 96
Pseudomonas simiae WCS417 0.21 PS417_02925 membrane protein 0.34 PS417_26815 peptidase M16 low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1812 membrane protein, MarC family 0.18 Echvi_1780 Predicted Zn-dependent peptidases low > 79
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS21710 antibiotic resistance protein MarC 0.47 HSERO_RS20710 peptidase M16 0.36 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS11625 MarC family protein 0.19 ABZR88_RS10340 pitrilysin family protein
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS15010 hypothetical protein 0.18 CA265_RS17980 peptidase M16 low > 88
Rhodanobacter sp. FW510-T8 0.13 OKGIIK_03070 marC YhgN family NAAT transporter 0.20 OKGIIK_14305 insulinase family protein low > 52
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS13835 YhgN family NAAT transporter 0.20 LRK54_RS07805 insulinase family protein low > 59
Rhodanobacter denitrificans MT42 0.13 LRK55_RS13550 YhgN family NAAT transporter 0.20 LRK55_RS07535 pitrilysin family protein low > 63

Not shown: 50 genomes with orthologs for RR42_RS18900 only; 5 genomes with orthologs for RR42_RS01980 only