Conservation of cofitness between QEN71_RS28765 and QEN71_RS02475 in Paraburkholderia sabiae LMG 24235

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS28765 coniferyl aldehyde dehydrogenase 1.0 QEN71_RS02475 response regulator 0.64 11
Burkholderia phytofirmans PsJN 0.87 BPHYT_RS18745 coniferyl aldehyde dehydrogenase 0.95 BPHYT_RS16220 transcriptional regulator — —
Paraburkholderia graminis OAS925 0.86 ABIE53_000069 acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase 0.96 ABIE53_003418 two-component system response regulator QseB low > 113
Paraburkholderia bryophila 376MFSha3.1 0.86 H281DRAFT_05792 coniferyl-aldehyde dehydrogenase 0.95 H281DRAFT_04180 two component transcriptional regulator, winged helix family low > 103
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS04755 coniferyl aldehyde dehydrogenase 0.66 ABZR87_RS22890 response regulator transcription factor low > 80
Variovorax sp. SCN45 0.57 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.66 GFF1175 Two-component system response regulator QseB low > 127
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01275 aldehyde dehydrogenase 0.68 RR42_RS37390 XRE family transcriptional regulator low > 128
Pseudomonas sp. S08-1 0.51 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase 0.61 OH686_04665 Two-component system response regulator QseB low > 80
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_16495 Aldehyde dehydrogenase 0.46 OKGIIK_14050 ompR DNA-binding response regulator low > 52
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS07140 coniferyl aldehyde dehydrogenase 0.47 LRK54_RS07600 response regulator low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS06880 coniferyl aldehyde dehydrogenase 0.47 LRK55_RS07340 response regulator low > 63
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.59 Pf6N2E2_1539 Two-component system response regulator QseB low > 103
Pseudomonas stutzeri RCH2 0.50 Psest_0247 NAD-dependent aldehyde dehydrogenases 0.59 Psest_3476 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Shewanella oneidensis MR-1 0.50 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) 0.44 SO2104 DNA-binding response regulator YgiX, putative (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.59 PfGW456L13_3169 Two-component system response regulator QseB low > 87
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_13300 coniferyl aldehyde dehydrogenase 0.59 AO356_23845 XRE family transcriptional regulator low > 104
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS12980 coniferyl aldehyde dehydrogenase 0.47 ABZR86_RS20365 response regulator transcription factor low > 74
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.58 Pf1N1B4_4454 Two-component system response regulator QseB — —
Pseudomonas sp. RS175 0.49 PFR28_04266 Coniferyl aldehyde dehydrogenase 0.60 PFR28_02328 Transcriptional regulatory protein QseB low > 88
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_08290 coniferyl aldehyde dehydrogenase 0.59 AO353_23010 XRE family transcriptional regulator low > 101
Shewanella loihica PV-4 0.48 Shew_3103 aldehyde dehydrogenase (RefSeq) 0.41 Shew_2695 two component transcriptional regulator (RefSeq) low > 60
Pseudomonas simiae WCS417 0.48 PS417_26845 coniferyl aldehyde dehydrogenase 0.58 PS417_13595 XRE family transcriptional regulator low > 88
Marinobacter adhaerens HP15 0.48 HP15_3329 NAD-dependent aldehyde dehydrogenase 0.44 HP15_3968 two component transcriptional regulator, winged helix family low > 73
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.59 PFLU_RS15245 response regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.59 PFLU_RS15245 response regulator low > 109
Shewanella sp. ANA-3 0.47 Shewana3_3251 aldehyde dehydrogenase (RefSeq) 0.42 Shewana3_1885 two component transcriptional regulator (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2579 Aldehyde dehydrogenase 0.55 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2579 Aldehyde dehydrogenase 0.55 Psyr_3511 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas putida KT2440 0.45 PP_5120 coniferyl aldehyde dehydrogenase 0.57 PP_2713 DNA-binding response regulator low > 96
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.65 Ac3H11_3946 Two-component system response regulator QseB low > 79
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS23860 coniferyl aldehyde dehydrogenase 0.68 HSERO_RS21985 transcriptional regulator low > 78
Variovorax sp. OAS795 0.42 ABID97_RS26110 coniferyl aldehyde dehydrogenase 0.66 ABID97_RS14955 response regulator low > 91
Lysobacter sp. OAE881 0.41 ABIE51_RS01765 coniferyl aldehyde dehydrogenase 0.49 ABIE51_RS00875 response regulator transcription factor low > 62
Acinetobacter radioresistens SK82 0.41 MPMX26_00376 Coniferyl aldehyde dehydrogenase 0.51 MPMX26_02034 Transcriptional regulatory protein QseB — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1486 NAD-dependent aldehyde dehydrogenases 0.44 Ga0059261_1369 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.65 GFF700 Two-component system response regulator QseB low > 90
Pectobacterium carotovorum WPP14 0.39 HER17_RS04160 coniferyl aldehyde dehydrogenase 0.51 HER17_RS21560 response regulator low > 75
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_19420 coniferyl aldehyde dehydrogenase 0.44 CSW01_19595 DNA-binding response regulator low > 62
Caulobacter crescentus NA1000 0.39 CCNA_01925 coniferyl aldehyde dehydrogenase 0.43 CCNA_01362 two-component response regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_01925 coniferyl aldehyde dehydrogenase 0.43 CCNA_01362 two-component response regulator low > 67
Rhodopseudomonas palustris CGA009 0.38 TX73_008670 coniferyl aldehyde dehydrogenase 0.45 TX73_009870 response regulator transcription factor low > 86
Dickeya dianthicola 67-19 0.37 HGI48_RS14500 coniferyl aldehyde dehydrogenase 0.56 HGI48_RS21345 response regulator low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS14550 coniferyl aldehyde dehydrogenase 0.49 DDA3937_RS19350 two-component system response regulator PmrA low > 74
Dickeya dianthicola ME23 0.37 DZA65_RS03045 coniferyl aldehyde dehydrogenase 0.55 DZA65_RS22325 response regulator low > 75
Alteromonas macleodii MIT1002 0.31 MIT1002_00534 Aldehyde dehydrogenase 0.51 MIT1002_00810 Transcriptional regulatory protein BasR low > 70

Not shown: 9 genomes with orthologs for QEN71_RS28765 only; 36 genomes with orthologs for QEN71_RS02475 only