Conservation of cofitness between QEN71_RS28765 and QEN71_RS01300 in Paraburkholderia sabiae LMG 24235

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS28765 coniferyl aldehyde dehydrogenase 1.0 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein 0.62 19
Burkholderia phytofirmans PsJN 0.87 BPHYT_RS18745 coniferyl aldehyde dehydrogenase 0.87 BPHYT_RS02415 cytochrome C550 low > 109
Paraburkholderia graminis OAS925 0.86 ABIE53_000069 acyl-CoA reductase-like NAD-dependent aldehyde dehydrogenase 0.88 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.86 H281DRAFT_05792 coniferyl-aldehyde dehydrogenase 0.86 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 low > 103
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS04755 coniferyl aldehyde dehydrogenase 0.56 ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein low > 80
Variovorax sp. SCN45 0.57 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.43 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 127
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01275 aldehyde dehydrogenase 0.58 RR42_RS01680 cytochrome C550 low > 128
Pseudomonas sp. S08-1 0.51 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase 0.36 OH686_09300 D-alanyl-D-alanine carboxypeptidase low > 80
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_16495 Aldehyde dehydrogenase 0.39 OKGIIK_00090 serine-type D-Ala-D-Ala carboxypeptidase — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS07140 coniferyl aldehyde dehydrogenase 0.41 LRK54_RS06490 D-alanyl-D-alanine carboxypeptidase low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS06880 coniferyl aldehyde dehydrogenase 0.41 LRK55_RS06235 D-alanyl-D-alanine carboxypeptidase family protein — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 103
Pseudomonas stutzeri RCH2 0.50 Psest_0247 NAD-dependent aldehyde dehydrogenases 0.39 Psest_0516 D-alanyl-D-alanine carboxypeptidase low > 67
Shewanella oneidensis MR-1 0.50 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) 0.35 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Shewanella amazonensis SB2B 0.49 Sama_2855 coniferyl aldehyde dehydrogenase (RefSeq) 0.34 Sama_2592 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_13300 coniferyl aldehyde dehydrogenase 0.37 AO356_15330 D-alanyl-D-alanine carboxypeptidase low > 104
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS12980 coniferyl aldehyde dehydrogenase 0.41 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein — —
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.36 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_08290 coniferyl aldehyde dehydrogenase 0.37 AO353_06455 D-alanyl-D-alanine carboxypeptidase low > 101
Pseudomonas sp. RS175 0.49 PFR28_04266 Coniferyl aldehyde dehydrogenase 0.37 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC low > 88
Shewanella loihica PV-4 0.48 Shew_3103 aldehyde dehydrogenase (RefSeq) 0.34 Shew_2939 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) low > 60
Pseudomonas simiae WCS417 0.48 PS417_26845 coniferyl aldehyde dehydrogenase 0.37 PS417_24705 D-alanyl-D-alanine carboxypeptidase low > 88
Marinobacter adhaerens HP15 0.48 HP15_3329 NAD-dependent aldehyde dehydrogenase 0.39 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS28490 coniferyl aldehyde dehydrogenase 0.37 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase low > 109
Shewanella sp. ANA-3 0.47 Shewana3_3251 aldehyde dehydrogenase (RefSeq) 0.35 Shewana3_0991 penicillin-binding protein 6 (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2579 Aldehyde dehydrogenase 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2579 Aldehyde dehydrogenase 0.36 Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 low > 86
Pseudomonas putida KT2440 0.45 PP_5120 coniferyl aldehyde dehydrogenase 0.36 PP_4803 D-alanyl-D-alanine carboxypeptidase low > 96
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0768 NAD-dependent aldehyde dehydrogenases 0.39 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.42 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS23860 coniferyl aldehyde dehydrogenase 0.49 HSERO_RS21530 cytochrome C550 low > 78
Variovorax sp. OAS795 0.42 ABID97_RS26110 coniferyl aldehyde dehydrogenase 0.43 ABID97_RS00695 D-alanyl-D-alanine carboxypeptidase family protein low > 91
Lysobacter sp. OAE881 0.41 ABIE51_RS01765 coniferyl aldehyde dehydrogenase 0.39 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein low > 62
Acinetobacter radioresistens SK82 0.41 MPMX26_00376 Coniferyl aldehyde dehydrogenase 0.36 MPMX26_01051 D-alanyl-D-alanine carboxypeptidase DacA low > 36
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1486 NAD-dependent aldehyde dehydrogenases 0.26 Ga0059261_0122 D-alanyl-D-alanine carboxypeptidase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.42 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) low > 90
Pectobacterium carotovorum WPP14 0.39 HER17_RS04160 coniferyl aldehyde dehydrogenase 0.34 HER17_RS12545 serine hydrolase low > 75
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_19420 coniferyl aldehyde dehydrogenase 0.34 CSW01_04845 D-alanyl-D-alanine carboxypeptidase low > 62
Rhodopseudomonas palustris CGA009 0.38 TX73_008670 coniferyl aldehyde dehydrogenase 0.25 TX73_014370 D-alanyl-D-alanine carboxypeptidase low > 86
Dickeya dianthicola 67-19 0.37 HGI48_RS14500 coniferyl aldehyde dehydrogenase 0.35 HGI48_RS09435 serine hydrolase low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS14550 coniferyl aldehyde dehydrogenase 0.34 DDA3937_RS09420 serine hydrolase low > 74
Dickeya dianthicola ME23 0.37 DZA65_RS03045 coniferyl aldehyde dehydrogenase 0.34 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase low > 75
Alteromonas macleodii MIT1002 0.31 MIT1002_00534 Aldehyde dehydrogenase 0.35 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor — —

Not shown: 9 genomes with orthologs for QEN71_RS28765 only; 38 genomes with orthologs for QEN71_RS01300 only