Conservation of cofitness between Psyr_4902 and Psyr_4852 in Pseudomonas syringae pv. syringae B728a

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4902 Protein of unknown function DUF495 1.0 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.40 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4902 Protein of unknown function DUF495 1.00 Psyr_4852 D-3-phosphoglycerate dehydrogenase low > 86
Pseudomonas putida KT2440 0.91 PP_0285 Fe(2+)-trafficking protein 0.93 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_12045 iron transporter 0.94 AO353_08510 3-phosphoglycerate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.94 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.94 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.95 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Pseudomonas sp. RS175 0.87 PFR28_04924 putative Fe(2+)-trafficking protein 0.94 PFR28_04842 D-3-phosphoglycerate dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.85 PFLU_RS01585 oxidative damage protection protein 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS01585 oxidative damage protection protein 0.95 PFLU_RS28695 phosphoglycerate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_09835 iron transporter 0.94 AO356_10300 3-phosphoglycerate dehydrogenase low > 104
Pseudomonas simiae WCS417 0.85 PS417_01540 iron transporter 0.95 PS417_27040 3-phosphoglycerate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.84 Psest_0144 Fe-S cluster protector protein 0.89 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Pseudomonas sp. S08-1 0.82 OH686_14545 Probable Fe(2+)-trafficking protein YggX 0.90 OH686_11280 D-3-phosphoglycerate dehydrogenase low > 80
Marinobacter adhaerens HP15 0.60 HP15_3016 Ion traffic superfamily protein 0.77 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_0206 Fe-S cluster protector protein 0.65 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases low > 40
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19970 oxidative damage protection protein 0.68 ABZR86_RS09635 phosphoglycerate dehydrogenase low > 74
Alteromonas macleodii MIT1002 0.51 MIT1002_00240 putative Fe(2+)-trafficking protein 0.68 MIT1002_02993 D-3-phosphoglycerate dehydrogenase low > 70
Acinetobacter radioresistens SK82 0.51 MPMX26_00184 putative Fe(2+)-trafficking protein 0.69 MPMX26_02773 D-3-phosphoglycerate dehydrogenase low > 36
Shewanella loihica PV-4 0.50 Shew_1122 hypothetical protein (RefSeq) 0.69 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.47 31
Lysobacter sp. OAE881 0.50 ABIE51_RS15145 oxidative damage protection protein 0.62 ABIE51_RS13245 phosphoglycerate dehydrogenase — —
Shewanella oneidensis MR-1 0.50 SO3369 conserved hypothetical protein (NCBI ptt file) 0.69 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.49 Shewana3_1180 hypothetical protein (RefSeq) 0.69 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 73
Serratia liquefaciens MT49 0.49 IAI46_21470 oxidative damage protection protein 0.67 IAI46_20900 phosphoglycerate dehydrogenase low > 86
Shewanella amazonensis SB2B 0.49 Sama_2491 hypothetical protein (RefSeq) 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS13040 iron transporter 0.47 RR42_RS27010 D-3-phosphoglycerate dehydrogenase low > 128
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02405 Fe(2+)-trafficking protein 0.64 CSW01_12555 phosphoglycerate dehydrogenase — —
Escherichia coli ECRC100 0.48 OKFHMN_19195 yggX oxidative damage protection protein 0.67 OKFHMN_19460 serA phosphoglycerate dehydrogenase low > 80
Escherichia coli BW25113 0.48 b2962 yggX hypothetical protein (NCBI) 0.67 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.48 BNILDI_09640 yggX oxidative damage protection protein 0.67 BNILDI_09905 serA phosphoglycerate dehydrogenase low > 75
Escherichia fergusonii Becca 0.48 EFB2_00940 putative Fe(2+)-trafficking protein 0.67 EFB2_00990 D-3-phosphoglycerate dehydrogenase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_00754 putative Fe(2+)-trafficking protein 0.67 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase low > 73
Escherichia coli ECOR38 0.48 HEPCGN_18465 yggX oxidative damage protection protein 0.67 HEPCGN_18760 serA phosphoglycerate dehydrogenase low > 87
Escherichia coli ECRC101 0.48 MCAODC_09715 yggX oxidative damage protection protein 0.67 MCAODC_09980 serA phosphoglycerate dehydrogenase low > 87
Klebsiella michiganensis M5al 0.48 BWI76_RS24160 Fe(2+)-trafficking protein 0.68 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase — —
Dickeya dadantii 3937 0.48 DDA3937_RS04895 oxidative damage protection protein 0.65 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.52 42
Escherichia coli ECRC98 0.48 JDDGAC_22825 yggX oxidative damage protection protein 0.67 JDDGAC_23100 serA phosphoglycerate dehydrogenase low > 86
Escherichia coli ECRC99 0.48 KEDOAH_08945 yggX oxidative damage protection protein 0.67 KEDOAH_08680 serA phosphoglycerate dehydrogenase — —
Escherichia coli ECOR27 0.48 NOLOHH_11055 yggX oxidative damage protection protein 0.67 NOLOHH_11370 serA phosphoglycerate dehydrogenase 0.68 56
Escherichia coli ECRC102 0.48 NIAGMN_16960 yggX oxidative damage protection protein 0.67 NIAGMN_17225 serA phosphoglycerate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.75 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 90
Escherichia coli BL21 0.48 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.67 ECD_02744 D-3-phosphoglycerate dehydrogenase low > 61
Pectobacterium carotovorum WPP14 0.48 HER17_RS16630 oxidative damage protection protein 0.65 HER17_RS02725 phosphoglycerate dehydrogenase low > 75
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_02560 yggX oxidative damage protection protein 0.66 OKGIIK_10055 serA phosphoglycerate dehydrogenase low > 52
Rahnella sp. WP5 0.47 EX31_RS02740 oxidative damage protection protein 0.66 EX31_RS21470 phosphoglycerate dehydrogenase 0.34 43
Escherichia coli Nissle 1917 0.47 ECOLIN_RS16475 oxidative damage protection protein 0.67 ECOLIN_RS16210 phosphoglycerate dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.67 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 78
Enterobacter sp. TBS_079 0.47 MPMX20_03819 putative Fe(2+)-trafficking protein 0.67 MPMX20_03771 D-3-phosphoglycerate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2999 Fe-S cluster protector protein 0.67 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases — —
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS13320 oxidative damage protection protein 0.67 LRK54_RS03185 phosphoglycerate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS13060 oxidative damage protection protein 0.67 LRK55_RS02935 phosphoglycerate dehydrogenase low > 63
Dickeya dianthicola 67-19 0.46 HGI48_RS04905 oxidative damage protection protein 0.65 HGI48_RS18400 phosphoglycerate dehydrogenase 0.52 44
Pantoea sp. MT58 0.46 IAI47_03555 oxidative damage protection protein 0.66 IAI47_03725 phosphoglycerate dehydrogenase low > 76
Dickeya dianthicola ME23 0.46 DZA65_RS05240 oxidative damage protection protein 0.65 DZA65_RS19540 phosphoglycerate dehydrogenase low > 75
Erwinia tracheiphila SCR3 0.45 LU632_RS05415 oxidative damage protection protein 0.67 LU632_RS05855 serA phosphoglycerate dehydrogenase low > 74
Variovorax sp. OAS795 0.45 ABID97_RS15460 oxidative damage protection protein 0.80 ABID97_RS07235 phosphoglycerate dehydrogenase — —
Variovorax sp. SCN45 0.45 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.78 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.79 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS02400 oxidative damage protection protein 0.50 ABCV34_RS15150 phosphoglycerate dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX 0.65 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —

Not shown: 11 genomes with orthologs for Psyr_4902 only; 6 genomes with orthologs for Psyr_4852 only