Conservation of cofitness between Psyr_3709 and Psyr_4573 in Pseudomonas syringae pv. syringae B728a

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3709 Response regulator receiver:Transcriptional regulatory protein, C-terminal 1.0 Psyr_4573 Histidine triad (HIT) protein 0.38 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3709 Response regulator receiver:Transcriptional regulatory protein, C-terminal 1.00 Psyr_4573 Histidine triad (HIT) protein low > 86
Pseudomonas sp. DMC3 0.90 GFF4840 Virulence transcriptional regulatory protein PhoP 0.96 GFF10 Purine nucleoside phosphoramidase low > 89
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2011 Transcriptional regulatory protein PhoP 0.94 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3483 Transcriptional regulatory protein PhoP 0.97 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 87
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_02815 transcriptional regulator 0.97 AO353_07180 zinc-binding protein low > 101
Pseudomonas sp. SVBP6 0.89 COO64_RS07420 response regulator 0.95 COO64_RS22375 histidine triad nucleotide-binding protein low > 93
Pseudomonas simiae WCS417 0.89 PS417_21515 transcriptional regulator 0.88 PS417_25685 zinc-binding protein low > 88
Pseudomonas orientalis W4I3 0.89 QF045_RS23605 response regulator 0.94 QF045_RS00075 histidine triad nucleotide-binding protein low > 93
Pseudomonas lactucae CFBP13502 0.89 GEMAOFIL_04447 Virulence transcriptional regulatory protein PhoP 0.97 GEMAOFIL_05257 Purine nucleoside phosphoramidase low > 96
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_18965 transcriptional regulator 0.97 AO356_14465 zinc-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_5704 Transcriptional regulatory protein PhoP 0.98 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) low > 103
Pseudomonas sp. RS175 0.87 PFR28_03244 Transcriptional regulatory protein PhoP 0.99 PFR28_04038 Purine nucleoside phosphoramidase low > 88
Pseudomonas aeruginosa PUPa3 0.84 DQ20_RS46275 phoP;inference=COORDINATES two-component system response regulator PhoP 0.78 DQ20_RS36140 histidine triad nucleotide-binding protein low > 101
Pseudomonas aeruginosa PA14 0.84 IKLFDK_05465 two-component system response regulator PhoP 0.78 IKLFDK_22145 histidine triad nucleotide-binding protein low > 98
Pseudomonas aeruginosa MRSN321 0.84 DY961_RS06525 phoP;inference=COORDINATES two-component system response regulator PhoP 0.78 DY961_RS23225 histidine triad nucleotide-binding protein low > 100
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS23130 response regulator transcription factor 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS23130 response regulator transcription factor 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein low > 109
Pseudomonas sp. BP01 0.83 JOY50_RS01975 response regulator 0.88 JOY50_RS18270 histidine triad nucleotide-binding protein low > 84
Pseudomonas putida KT2440 0.82 PP_1186 two component system DNA-binding transcriptional dual regulator 0.88 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase low > 96
Pseudomonas stutzeri RCH2 0.80 Psest_3883 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.78 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 67
Shewanella loihica PV-4 0.55 Shew_2348 two component transcriptional regulator (RefSeq) 0.49 Shew_1731 histidine triad (HIT) protein (RefSeq) — —
Shewanella sp. ANA-3 0.53 Shewana3_1724 two component transcriptional regulator (RefSeq) 0.49 Shewana3_2507 histidine triad (HIT) protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.53 Sama_1542 response regulator receiver protein (RefSeq) 0.49 Sama_1448 HIT family protein (RefSeq) low > 62
Lysobacter sp. OAE881 0.53 ABIE51_RS03940 response regulator transcription factor 0.51 ABIE51_RS14005 histidine triad nucleotide-binding protein low > 62
Shewanella oneidensis MR-1 0.53 SO1946 phoP transcriptional regulatory protein PhoP (NCBI ptt file) 0.49 SO2723 HIT family protein (NCBI ptt file) — —
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS18360 response regulator transcription factor 0.56 ABZR86_RS06230 histidine triad nucleotide-binding protein low > 74
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.5008.1 Two-component system regulatory protein 0.44 Xcc-8004.4011.1 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1560 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.47 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 40
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05740 response regulator transcription factor 0.54 LRK55_RS01015 histidine triad nucleotide-binding protein — —
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05985 response regulator transcription factor 0.55 LRK54_RS01245 histidine triad nucleotide-binding protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS17390 response regulator transcription factor 0.60 LRK53_RS08830 histidine triad nucleotide-binding protein — —
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_00635 ompR DNA-binding response regulator 0.58 OKGIIK_05660 hinT histidine triad nucleotide-binding protein — —
Klebsiella michiganensis M5al 0.50 BWI76_RS11280 two-component system response regulator PhoP 0.48 BWI76_RS11145 histidine triad nucleotide-binding protein — —
Klebsiella pneumoniae MKP103 0.50 KDGMDA_18880 two-component system response regulator PhoP 0.49 KDGMDA_18740 purine nucleoside phosphoramidase low > 95
Rahnella sp. WP5 0.49 EX31_RS24560 two-component system response regulator PhoP 0.47 EX31_RS24480 purine nucleoside phosphoramidase low > 89
Enterobacter asburiae PDN3 0.49 EX28DRAFT_1800 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.46 EX28DRAFT_1827 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3415 Transcriptional regulatory protein PhoP 0.45 GFF3386 YcfF/hinT protein: a purine nucleoside phosphoramidase low > 78
Escherichia coli BL21 0.48 ECD_01128 response regulator in two-component regulatory system with PhoQ 0.45 ECD_01099 purine nucleoside phosphoramidase, dadA activator protein — —
Escherichia coli BW25113 0.48 b1130 phoP DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) 0.45 b1103 ycfF orf, hypothetical protein (VIMSS) low > 76
Escherichia fergusonii Becca 0.48 EFB2_02845 Transcriptional regulatory protein PhoP 0.45 EFB2_02872 Purine nucleoside phosphoramidase low > 86
Escherichia coli ECOR38 0.48 HEPCGN_24200 phoP two-component system response regulator PhoP 0.45 HEPCGN_23960 hinT purine nucleoside phosphoramidase low > 88
Escherichia coli ECOR27 0.48 NOLOHH_20915 phoP two-component system response regulator PhoP 0.45 NOLOHH_21055 hinT purine nucleoside phosphoramidase low > 76
Escherichia coli ECRC62 0.48 BNILDI_19080 phoP two-component system response regulator PhoP 0.45 BNILDI_19215 hinT purine nucleoside phosphoramidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_02538 Transcriptional regulatory protein PhoP 0.45 OHPLBJKB_02563 Purine nucleoside phosphoramidase — —
Escherichia coli Nissle 1917 0.48 ECOLIN_RS06610 two-component system response regulator PhoP 0.44 ECOLIN_RS06370 purine nucleoside phosphoramidase — —
Alteromonas macleodii MIT1002 0.48 MIT1002_01421 Transcriptional regulatory protein PhoP 0.64 MIT1002_00744 HIT-like protein low > 70
Serratia liquefaciens MT49 0.48 IAI46_10395 two-component system response regulator PhoP 0.49 IAI46_09880 purine nucleoside phosphoramidase low > 87
Enterobacter sp. TBS_079 0.48 MPMX20_01811 Transcriptional regulatory protein PhoP 0.45 MPMX20_01784 Purine nucleoside phosphoramidase low > 85
Escherichia coli ECRC98 0.48 JDDGAC_06635 phoP two-component system response regulator PhoP 0.45 JDDGAC_07185 hinT purine nucleoside phosphoramidase — —
Escherichia coli ECRC101 0.48 MCAODC_22355 phoP two-component system response regulator PhoP 0.45 MCAODC_22885 hinT purine nucleoside phosphoramidase low > 87
Escherichia coli ECRC100 0.48 OKFHMN_00730 phoP two-component system response regulator PhoP 0.45 OKFHMN_03525 hinT purine nucleoside phosphoramidase — —
Escherichia coli ECRC102 0.48 NIAGMN_24875 phoP two-component system response regulator PhoP 0.45 NIAGMN_24305 hinT purine nucleoside phosphoramidase — —
Escherichia coli ECRC99 0.48 KEDOAH_24815 phoP two-component system response regulator PhoP 0.45 KEDOAH_24230 hinT purine nucleoside phosphoramidase — —
Pectobacterium carotovorum WPP14 0.47 HER17_RS11640 two-component system response regulator PhoP 0.48 HER17_RS08705 purine nucleoside phosphoramidase low > 75
Castellaniella sp019104865 MT123 0.46 ABCV34_RS15610 response regulator transcription factor 0.41 ABCV34_RS11265 histidine triad nucleotide-binding protein — —
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS19455 two-component system response regulator PhoP 0.46 PagCFBP13505_RS05320 purine nucleoside phosphoramidase low > 74
Erwinia tracheiphila SCR3 0.46 LU632_RS14590 phoP two-component system response regulator PhoP 0.44 LU632_RS14775 hinT purine nucleoside phosphoramidase low > 73
Erwinia tracheiphila HP pepo 2.2 0.46 IJEDHG_00380 phoP two-component system response regulator PhoP 0.44 IJEDHG_00610 hinT purine nucleoside phosphoramidase low > 61
Pantoea sp. MT58 0.46 IAI47_11930 two-component system response regulator PhoP 0.46 IAI47_12015 purine nucleoside phosphoramidase low > 76
Erwinia amylovora T8 0.45 OLJFJH_15270 two-component system response regulator PhoP 0.48 OLJFJH_15485 purine nucleoside phosphoramidase low > 58
Dickeya dianthicola 67-19 0.45 HGI48_RS11545 two-component system response regulator PhoP 0.47 HGI48_RS13135 purine nucleoside phosphoramidase low > 71
Dickeya dianthicola ME23 0.45 DZA65_RS11880 two-component system response regulator PhoP 0.47 DZA65_RS13605 purine nucleoside phosphoramidase low > 75
Dickeya dadantii 3937 0.45 DDA3937_RS11500 two-component system response regulator PhoP 0.47 DDA3937_RS13070 purine nucleoside phosphoramidase low > 74
Dinoroseobacter shibae DFL-12 0.32 Dshi_1508 two component transcriptional regulator, winged helix family (RefSeq) 0.35 Dshi_0679 histidine triad (HIT) protein (RefSeq) low > 64

Not shown: 1 genomes with orthologs for Psyr_3709 only; 28 genomes with orthologs for Psyr_4573 only