Conservation of cofitness between Psyr_3669 and Psyr_4155 in Pseudomonas syringae pv. syringae B728a

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation 1.0 Psyr_4155 Protein of unknown function DUF615 0.30 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3669 Membrane protein involved in aromatic hydrocarbon degradation 1.00 Psyr_4155 Protein of unknown function DUF615 low > 86
Pseudomonas sp. SVBP6 0.78 COO64_RS07175 OmpP1/FadL family transporter 0.80 COO64_RS04230 yjgA ribosome biogenesis factor YjgA low > 93
Pseudomonas putida KT2440 0.76 PP_1689 putative Long-chain fatty acid transporter 0.81 PP_0941 putative ribosome associated protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_24065 Long-chain fatty acid transport protein 0.90 AO353_05210 hypothetical protein low > 101
Pseudomonas sp. BP01 0.71 JOY50_RS28015 OmpP1/FadL family transporter 0.80 JOY50_RS11075 yjgA ribosome biogenesis factor YjgA low > 84
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_830 Long-chain fatty acid transport protein 0.90 Pf6N2E2_3279 FIG138315: Putative alpha helix protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3720 Long-chain fatty acid transport protein 0.89 Pf1N1B4_1091 FIG138315: Putative alpha helix protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_27575 Long-chain fatty acid transport protein 0.90 AO356_07090 hypothetical protein low > 104
Pseudomonas sp. DMC3 0.69 GFF2561 Putative outer membrane protein 0.91 GFF1817 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4229 Long-chain fatty acid transport protein 0.91 PfGW456L13_5025 FIG138315: Putative alpha helix protein low > 87
Pseudomonas sp. RS175 0.69 PFR28_03194 Long-chain fatty acid transport protein 0.90 PFR28_00162 hypothetical protein low > 88
Pseudomonas segetis P6 0.68 MPMX49_01831 Outer membrane protein P1 0.74 MPMX49_03864 hypothetical protein low > 75
Pseudomonas stutzeri RCH2 0.65 Psest_2997 Long-chain fatty acid transport protein 0.75 Psest_3319 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24030 fatty acid transporter membrane protein 0.90 PFLU_RS04345 ribosome-associated protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24030 fatty acid transporter membrane protein 0.90 PFLU_RS04345 ribosome-associated protein low > 109
Pseudomonas lactucae CFBP13502 0.61 GEMAOFIL_04196 Putative outer membrane protein 0.89 GEMAOFIL_01063 hypothetical protein low > 93
Pseudomonas simiae WCS417 0.59 PS417_19995 Long-chain fatty acid transport protein 0.90 PS417_04290 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.55 OH686_04915 Long-chain fatty acid transport protein 0.82 OH686_08575 UPF0307 protein YjgA low > 80
Pseudomonas aeruginosa PA14 0.51 IKLFDK_06110 Long-chain fatty acid transport protein 0.72 IKLFDK_01715 ribosome-associated protein low > 100
Methylophilus sp. DMC18 0.26 GFF2418 47 kDa outer membrane protein 0.37 GFF831 hypothetical protein low > 43
Castellaniella sp019104865 MT123 0.24 ABCV34_RS11395 porin 0.28 ABCV34_RS10615 ribosome biogenesis factor YjgA low > 48
Alteromonas macleodii MIT1002 0.24 MIT1002_03890 Outer membrane flp protein 0.24 MIT1002_00229 x96 protein low > 70
Dechlorosoma suillum PS 0.22 Dsui_0321 long-chain fatty acid transport protein 0.24 Dsui_1235 hypothetical protein low > 51
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.22.1 Long-chain fatty acid transport protein 0.35 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein — —
Shewanella amazonensis SB2B 0.21 Sama_0339 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.29 Sama_0481 hypothetical protein (RefSeq) low > 62
Lysobacter sp. OAE881 0.21 ABIE51_RS19235 outer membrane protein transport protein 0.32 ABIE51_RS06800 ribosome biogenesis factor YjgA low > 62
Shewanella sp. ANA-3 0.21 Shewana3_3757 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.25 Shewana3_3632 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.21 SO4232 long-chain fatty acid transport protein (NCBI ptt file) 0.25 SO4079 conserved hypothetical protein (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.21 DZA65_RS15505 long-chain fatty acid transporter FadL 0.33 DZA65_RS01475 ribosome-associated protein — —
Erwinia amylovora T8 0.20 OLJFJH_11125 long-chain fatty acid transporter FadL 0.34 OLJFJH_02360 ribosome-associated protein — —
Rahnella sp. WP5 0.20 EX31_RS19720 long-chain fatty acid transporter FadL 0.30 EX31_RS12315 ribosome-associated protein low > 89
Dickeya dianthicola 67-19 0.20 HGI48_RS14565 long-chain fatty acid transporter FadL 0.33 HGI48_RS01410 ribosome-associated protein low > 71
Dickeya dadantii 3937 0.20 DDA3937_RS14615 long-chain fatty acid transporter FadL 0.35 DDA3937_RS01495 ribosome-associated protein low > 74
Escherichia fergusonii Becca 0.20 EFB2_01515 Long-chain fatty acid transport protein 0.31 EFB2_04299 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.20 ECOLIN_RS13565 long-chain fatty acid transporter FadL 0.31 ECOLIN_RS24565 ribosome biogenesis factor YjgA low > 55
Serratia liquefaciens MT49 0.20 IAI46_18060 long-chain fatty acid transporter FadL 0.34 IAI46_22590 ribosome-associated protein — —
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_2708 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.27 DvMF_1335 hypothetical protein (RefSeq) low > 51
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS00070 long-chain fatty acid transporter FadL 0.34 PagCFBP13505_RS11360 ribosome-associated protein low > 74
Klebsiella pneumoniae MKP103 0.19 KDGMDA_27305 long-chain fatty acid transporter FadL 0.31 KDGMDA_11325 ribosome-associated protein 0.20 90
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS12985 outer membrane protein transport protein 0.28 ABZR86_RS21710 ribosome biogenesis factor YjgA low > 74
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0268 Long-chain fatty acid transport protein 0.32 EX28DRAFT_3421 Uncharacterized protein conserved in bacteria — —
Marinobacter adhaerens HP15 0.19 HP15_291 membrane protein involved in aromatic hydrocarbon degradation 0.37 HP15_2448 protein belonging to uncharacterized protein family UPF0307 low > 73
Pectobacterium carotovorum WPP14 0.19 HER17_RS06875 long-chain fatty acid transporter FadL 0.35 HER17_RS20095 ribosome-associated protein — —
Enterobacter sp. TBS_079 0.19 MPMX20_03271 Long-chain fatty acid transport protein 0.33 MPMX20_00516 hypothetical protein — —
Shewanella loihica PV-4 0.19 Shew_3468 membrane protein involved in aromatic hydrocarbon degradation (RefSeq) 0.17 Shew_0415 hypothetical protein (RefSeq) low > 60
Pantoea sp. MT58 0.19 IAI47_06115 long-chain fatty acid transporter FadL 0.34 IAI47_02760 ribosome-associated protein — —
Erwinia tracheiphila SCR3 0.19 LU632_RS07305 fadL long-chain fatty acid transporter FadL 0.32 LU632_RS02140 ribosome-associated protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_17780 fadL long-chain fatty acid transporter FadL 0.32 IJEDHG_06775 ribosome-associated protein low > 61
Escherichia coli BW25113 0.18 b2344 fadL long-chain fatty acid outer membrane transporter (RefSeq) 0.31 b4234 yjgA hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.18 BNILDI_13095 fadL long-chain fatty acid transporter FadL 0.31 BNILDI_07320 yjgA ribosome-associated protein 0.60 44
Escherichia coli BL21 0.18 ECD_02268 long-chain fatty acid outer membrane transporter 0.31 ECD_04102 ribosome-associated UPF0307 family protein low > 61
Escherichia coli ECOR38 0.18 HEPCGN_21740 fadL long-chain fatty acid transporter FadL 0.31 HEPCGN_10130 yjgA ribosome-associated protein low > 88
Escherichia coli ECOR27 0.18 NOLOHH_14180 fadL long-chain fatty acid transporter FadL 0.31 NOLOHH_04190 yjgA ribosome-associated protein low > 76
Escherichia coli ECRC98 0.18 JDDGAC_26505 fadL long-chain fatty acid transporter FadL 0.31 JDDGAC_15570 yjgA ribosome-associated protein 0.36 19
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_01362 Long-chain fatty acid transport protein 0.31 OHPLBJKB_03801 hypothetical protein low > 74
Escherichia coli ECRC100 0.18 OKFHMN_22545 fadL long-chain fatty acid transporter FadL 0.31 OKFHMN_11930 yjgA ribosome-associated protein low > 79
Escherichia coli ECRC99 0.18 KEDOAH_05650 fadL long-chain fatty acid transporter FadL 0.31 KEDOAH_16225 yjgA ribosome-associated protein — —
Escherichia coli ECRC101 0.18 MCAODC_13575 fadL long-chain fatty acid transporter FadL 0.31 MCAODC_02435 yjgA ribosome-associated protein 0.35 83
Escherichia coli ECRC102 0.18 NIAGMN_20320 fadL long-chain fatty acid transporter FadL 0.31 NIAGMN_09780 yjgA ribosome-associated protein low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1957 Long-chain fatty acid transport protein 0.31 GFF903 FIG138315: Putative alpha helix protein — —
Klebsiella michiganensis M5al 0.18 BWI76_RS20470 long-chain fatty acid transporter 0.32 BWI76_RS02845 hypothetical protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU1260 outer membrane protein P1, putative (TIGR) 0.31 DVU0975 conserved hypothetical protein (TIGR) low > 55
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_16490 Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.28 OKGIIK_10270 DUF615 domain-containing protein low > 53

Not shown: 12 genomes with orthologs for Psyr_3669 only; 7 genomes with orthologs for Psyr_4155 only