Conservation of cofitness between Psyr_4002 and Psyr_3676 in Pseudomonas syringae pv. syringae B728a

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4002 conserved hypothetical protein 1.0 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.43 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4002 conserved hypothetical protein 1.00 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) low > 86
Pseudomonas orientalis W4I3 0.89 QF045_RS24825 flavin reductase family protein 0.83 QF045_RS22155 cobyric acid synthase low > 93
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_03820 Asp/Glu/hydantoin racemase 0.85 AO353_02615 cobyric acid synthase low > 101
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS24295 flavin reductase family protein 0.83 PFLU_RS22005 cobyric acid synthase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS24295 flavin reductase family protein 0.83 PFLU_RS22005 cobyric acid synthase low > 109
Pseudomonas sp. DMC3 0.87 GFF5043 hypothetical protein 0.85 GFF2552 Cobyric acid synthase low > 89
Pseudomonas simiae WCS417 0.87 PS417_22655 Asp/Glu/hydantoin racemase 0.84 PS417_20040 cobyric acid synthase — —
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_687 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.86 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) low > 87
Pseudomonas lactucae CFBP13502 0.87 GEMAOFIL_04685 hypothetical protein 0.84 GEMAOFIL_04205 Cobyric acid synthase low > 96
Pseudomonas sp. RS175 0.86 PFR28_03470 hypothetical protein 0.85 PFR28_03204 Cobyric acid synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_5484 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.86 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) low > 103
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1803 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.86 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) low > 87
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_17775 Asp/Glu/hydantoin racemase 0.84 AO356_19160 cobyric acid synthase low > 104
Pseudomonas sp. BP01 0.80 JOY50_RS14510 flavin reductase family protein 0.83 JOY50_RS27965 cobyric acid synthase low > 84
Pseudomonas sp. SVBP6 0.80 COO64_RS26200 flavin reductase family protein 0.80 COO64_RS07225 cobyric acid synthase low > 93
Pseudomonas putida KT2440 0.79 PP_1398 conserved protein of unknown function 0.83 PP_1677 Adenosyl-cobyric acid synthase low > 96
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS31570 Asp/Glu/hydantoin racemase 0.68 RR42_RS16075 cobyric acid synthase low > 128
Variovorax sp. OAS795 0.75 ABID97_RS06070 flavin reductase family protein 0.33 ABID97_RS17340 cobyric acid synthase low > 91
Variovorax sp. SCN45 0.74 GFF4552 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.34 GFF426 Cobyric acid synthase (EC 6.3.5.10) low > 127
Acidovorax sp. GW101-3H11 0.73 Ac3H11_4939 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.32 Ac3H11_999 Cobyric acid synthase (EC 6.3.5.10) low > 79
Rhodopseudomonas palustris CGA009 0.65 TX73_022870 flavin reductase family protein 0.40 TX73_010800 cobyric acid synthase low > 86
Ralstonia solanacearum GMI1000 0.63 RS_RS09180 flavin reductase family protein 0.66 RS_RS12000 cobyric acid synthase low > 80
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS38540 flavin reductase family protein 0.61 QEN71_RS25095 cobyric acid synthase low > 153
Klebsiella pneumoniae MKP103 0.62 KDGMDA_17210 Asp/Glu/hydantoin racemase 0.39 KDGMDA_03575 cobyric acid synthase low > 95
Shewanella loihica PV-4 0.61 Shew_0498 flavoprotein oxygenase (RefSeq) 0.59 Shew_0717 cobyric acid synthase (RefSeq) low > 60
Klebsiella michiganensis M5al 0.60 BWI76_RS08950 Asp/Glu/hydantoin racemase 0.38 BWI76_RS23010 cobyric acid synthase CobQ low > 92
Paraburkholderia graminis OAS925 0.60 ABIE53_004743 flavin reductase (DIM6/NTAB) family NADH-FMN oxidoreductase RutF 0.61 ABIE53_001255 adenosylcobyric acid synthase low > 113
Shewanella oneidensis MR-1 0.59 SO0492 hypothetical flavoprotein oxygenases (NCBI ptt file) 0.62 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS34150 Asp/Glu/hydantoin racemase 0.60 BPHYT_RS04900 cobyric acid synthase low > 109
Shewanella sp. ANA-3 0.58 Shewana3_0503 flavoprotein oxygenase (RefSeq) 0.62 Shewana3_3275 cobyric acid synthase (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_03516 NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family 0.60 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) low > 103
Rhodospirillum rubrum S1H 0.47 Rru_A2631 hypothetical protein (NCBI) 0.44 Rru_A3381 Cobyric acid synthase CobQ (NCBI) low > 58
Agrobacterium fabrum C58 0.45 Atu1743 hypothetical protein 0.39 Atu2808 cobyric acid synthase low > 89
Phaeobacter inhibens DSM 17395 0.41 PGA1_c06410 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 0.41 PGA1_c24000 cobyric acid synthase CobQ — —
Sinorhizobium meliloti 1021 0.41 SMc01013 hypothetical protein 0.41 SMc04309 cobyric acid synthase — —
Bosea sp. OAE506 0.40 ABIE41_RS14120 flavin reductase family protein 0.37 ABIE41_RS03845 cobyric acid synthase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS09680 flavin reductase family protein 0.41 ABIE40_RS11175 cobyric acid synthase low > 107
Xanthobacter sp. DMC5 0.38 GFF3096 hypothetical protein 0.36 GFF372 Cobyric acid synthase — —
Dinoroseobacter shibae DFL-12 0.37 Dshi_2065 flavin reductase-like, FMN-binding (RefSeq) 0.37 Dshi_2096 cobyric acid synthase CobQ (RefSeq) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF4715 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.33 GFF3998 Cobyric acid synthase (EC 6.3.5.10) — —
Pseudomonas segetis P6 0.25 MPMX49_02671 hypothetical protein 0.77 MPMX49_01822 Cobyric acid synthase low > 75
Sphingobium sp. HT1-2 0.25 GFF1403 hypothetical protein 0.41 GFF66 Cobyric acid synthase (EC 6.3.5.10) low > 95
Pseudomonas sp. S08-1 0.23 OH686_01870 flavin reductase domain protein FMN-binding protein 0.78 OH686_04965 cobyric acid synthase CobQ — —
Pseudomonas aeruginosa MRSN321 0.22 DY961_RS19875 flavin reductase family protein 0.81 DY961_RS06025 cobyric acid synthase low > 100
Pseudomonas aeruginosa PUPa3 0.22 DQ20_RS53980 flavin reductase family protein 0.81 DQ20_RS46755 cobyric acid synthase low > 101
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS06660 flavin reductase 0.62 HSERO_RS13230 cobyric acid synthase low > 78
Pseudomonas aeruginosa PA14 0.21 IKLFDK_07890 flavin reductase family protein 0.80 IKLFDK_06055 cobyric acid synthase — —
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS01340 flavin reductase family protein 0.37 HMPREF1078_RS00930 cobyric acid synthase low > 61
Fusobacterium nucleatum SB010 0.13 HUW76_08975 flavin reductase family protein 0.38 HUW76_05230 cobyric acid synthase low > 35
Desulfovibrio vulgaris Hildenborough JW710 0.13 DVU0384 flr flavoredoxin (TIGR) 0.36 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) low > 55

Not shown: 16 genomes with orthologs for Psyr_4002 only; 27 genomes with orthologs for Psyr_3676 only