Conservation of cofitness between Psyr_0173 and Psyr_3572 in Pseudomonas syringae pv. syringae B728a

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0173 SSU ribosomal protein S6P modification protein 1.0 Psyr_3572 acetyl-coenzyme A synthetase 0.46 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0173 SSU ribosomal protein S6P modification protein 1.00 Psyr_3572 acetyl-coenzyme A synthetase low > 86
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_11755 ribosomal protein S6 modification protein 0.92 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_3903 Ribosomal protein S6 glutaminyl transferase 0.91 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.42 27
Pseudomonas simiae WCS417 0.96 PS417_01180 ribosomal protein S6 modification protein 0.91 PS417_21750 acetyl-CoA synthetase 0.31 20
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_10160 ribosomal protein S6 modification protein 0.92 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 104
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase 0.91 PFLU_RS23355 acetate--CoA ligase 0.28 8
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_1774 Ribosomal protein S6 glutaminyl transferase 0.91 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas fluorescens SBW25 0.96 PFLU_RS01290 30S ribosomal protein S6--L-glutamate ligase 0.91 PFLU_RS23355 acetate--CoA ligase 0.59 28
Pseudomonas sp. DMC3 0.96 GFF4181 Ribosomal protein S6--L-glutamate ligase 0.91 GFF4887 Acetyl-coenzyme A synthetase low > 89
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_425 Ribosomal protein S6 glutaminyl transferase 0.91 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas sp. SVBP6 0.95 COO64_RS00690 rimK 30S ribosomal protein S6--L-glutamate ligase 0.93 COO64_RS21645 acs acetate--CoA ligase low > 93
Pseudomonas sp. RS175 0.95 PFR28_04870 Ribosomal protein S6--L-glutamate ligase 0.92 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Pseudomonas sp. BP01 0.95 JOY50_RS18340 rimK 30S ribosomal protein S6--L-glutamate ligase 0.93 JOY50_RS01010 acs acetate--CoA ligase low > 84
Pseudomonas putida KT2440 0.95 PP_0248 Probable alpha-L-glutamate ligase 0.93 PP_4487 acetyl-CoA synthetase 0.18 81
Pseudomonas stutzeri RCH2 0.94 Psest_3993 alpha-L-glutamate ligases, RimK family 0.80 Psest_2657 acetate--CoA ligase low > 67
Pseudomonas aeruginosa PA14 0.93 IKLFDK_27490 30S ribosomal protein S6--L-glutamate ligase 0.90 IKLFDK_03940 acetate--CoA ligase low > 101
Pseudomonas sp. S08-1 0.92 OH686_11080 Ribosomal protein S6--L-glutamate ligase 0.91 OH686_21250 acetate--CoA ligase 0.65 77
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_11610 30S ribosomal protein S6--L-glutamate ligase 0.73 CSW01_01520 acetyl-coenzyme A synthetase low > 62
Marinobacter adhaerens HP15 0.78 HP15_719 alpha-L-glutamate ligase, RimK family 0.72 HP15_811 acetyl-CoA synthetase low > 73
Shewanella amazonensis SB2B 0.75 Sama_1299 ribosomal protein S6 modification protein (RefSeq) 0.73 Sama_2079 acetyl-CoA synthetase (RefSeq) low > 62
Shewanella sp. ANA-3 0.74 Shewana3_2274 SSU ribosomal protein S6P modification protein (RefSeq) 0.74 Shewana3_2523 acetyl-CoA synthetase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.74 SO2270 rimK-2 ribosomal protein S6 modification protein (NCBI ptt file) 0.74 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.74 MIT1002_03511 Alpha-aminoadipate--LysW ligase LysX 0.65 MIT1002_03516 Acetyl-coenzyme A synthetase low > 70
Shewanella loihica PV-4 0.72 Shew_3664 alpha-L-glutamate ligase (RefSeq) 0.74 Shew_1533 acetyl-CoA synthetase (RefSeq) low > 60
Serratia liquefaciens MT49 0.66 IAI46_08360 30S ribosomal protein S6--L-glutamate ligase 0.70 IAI46_01405 acetate--CoA ligase low > 86
Dickeya dianthicola 67-19 0.66 HGI48_RS09470 30S ribosomal protein S6--L-glutamate ligase 0.70 HGI48_RS03580 acetate--CoA ligase 0.65 30
Dickeya dianthicola ME23 0.66 DZA65_RS09780 30S ribosomal protein S6--L-glutamate ligase 0.70 DZA65_RS03695 acetate--CoA ligase low > 75
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2473 alpha-L-glutamate ligases, RimK family 0.63 B158DRAFT_0063 acetate--CoA ligase low > 40
Rahnella sp. WP5 0.66 EX31_RS09640 30S ribosomal protein S6--L-glutamate ligase 0.70 EX31_RS09040 acetate--CoA ligase low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS12510 30S ribosomal protein S6--L-glutamate ligase 0.72 HER17_RS17630 acetate--CoA ligase low > 75
Escherichia coli BL21 0.65 ECD_00857 ribosomal protein S6 modification protein 0.71 ECD_03941 acetyl-CoA synthetase low > 61
Escherichia coli BW25113 0.65 b0852 rimK ribosomal protein S6 modification protein (NCBI) 0.71 b4069 acs acetyl-coenzyme A synthetase (NCBI) low > 76
Dickeya dadantii 3937 0.65 DDA3937_RS09450 30S ribosomal protein S6--L-glutamate ligase 0.70 DDA3937_RS03480 acetate--CoA ligase low > 74
Escherichia fergusonii Becca 0.65 EFB2_03209 Ribosomal protein S6--L-glutamate ligase 0.71 EFB2_04520 Acetyl-coenzyme A synthetase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02816 Ribosomal protein S6--L-glutamate ligase 0.71 OHPLBJKB_03971 Acetyl-coenzyme A synthetase low > 73
Escherichia coli ECRC62 0.65 BNILDI_20595 rimK 30S ribosomal protein S6--L-glutamate ligase 0.71 BNILDI_06445 acs acetate--CoA ligase low > 75
Escherichia coli ECOR27 0.65 NOLOHH_22340 rimK 30S ribosomal protein S6--L-glutamate ligase 0.71 NOLOHH_05080 acs acetate--CoA ligase low > 75
Escherichia coli ECRC98 0.65 JDDGAC_09605 rimK 30S ribosomal protein S6--L-glutamate ligase 0.70 JDDGAC_16465 acs acetate--CoA ligase low > 86
Escherichia coli ECRC99 0.65 KEDOAH_21940 rimK 30S ribosomal protein S6--L-glutamate ligase 0.70 KEDOAH_15320 acs acetate--CoA ligase — —
Escherichia coli ECRC102 0.65 NIAGMN_04015 rimK 30S ribosomal protein S6--L-glutamate ligase 0.70 NIAGMN_10675 acs acetate--CoA ligase — —
Escherichia coli ECRC101 0.65 MCAODC_25185 rimK 30S ribosomal protein S6--L-glutamate ligase 0.70 MCAODC_03340 acs acetate--CoA ligase low > 87
Escherichia coli ECRC100 0.65 OKFHMN_05970 rimK 30S ribosomal protein S6--L-glutamate ligase 0.70 OKFHMN_12830 acs acetate--CoA ligase low > 80
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04535 30S ribosomal protein S6--L-glutamate ligase 0.70 ECOLIN_RS23550 acetate--CoA ligase low > 55
Escherichia coli ECOR38 0.65 HEPCGN_02060 rimK 30S ribosomal protein S6--L-glutamate ligase 0.71 HEPCGN_11455 acs acetate--CoA ligase low > 87
Enterobacter sp. TBS_079 0.63 MPMX20_01493 Ribosomal protein S6--L-glutamate ligase 0.70 MPMX20_00291 Acetyl-coenzyme A synthetase low > 85
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2101 alpha-L-glutamate ligase, RimK family 0.70 EX28DRAFT_4232 acetate--CoA ligase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF756 Ribosomal protein S6 glutaminyl transferase 0.70 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS09450 30S ribosomal protein S6--L-glutamate ligase 0.70 BWI76_RS02095 acetyl-coenzyme A synthetase low > 92
Pantoea sp. MT58 0.62 IAI47_13055 30S ribosomal protein S6--L-glutamate ligase 0.70 IAI47_17715 acetate--CoA ligase low > 76
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS11620 30S ribosomal protein S6--L-glutamate ligase 0.68 ABZR86_RS15200 acetate--CoA ligase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.1332.1 Ribosomal protein S6 glutaminyl transferase 0.66 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.49 24
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_1743 alpha-L-glutamate ligases, RimK family 0.53 Echvi_1268 acetate--CoA ligase low > 79
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_11870 rimK 30S ribosomal protein S6--L-glutamate ligase 0.67 OKGIIK_15190 acs acetate--CoA ligase low > 52
Lysobacter sp. OAE881 0.55 ABIE51_RS16520 30S ribosomal protein S6--L-glutamate ligase 0.66 ABIE51_RS01660 acetate--CoA ligase low > 62
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS12005 30S ribosomal protein S6--L-glutamate ligase 0.68 LRK54_RS08420 acetate--CoA ligase low > 59
Rhodanobacter denitrificans MT42 0.55 LRK55_RS11740 30S ribosomal protein S6--L-glutamate ligase 0.68 LRK55_RS08185 acetate--CoA ligase low > 63
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS16530 30S ribosomal protein S6--L-glutamate ligase 0.67 LRK53_RS00080 acetate--CoA ligase low > 60
Methylophilus sp. DMC18 0.14 GFF680 hypothetical protein 0.46 GFF994 Acetyl-coenzyme A synthetase 0.76 25
Paraburkholderia bryophila 376MFSha3.1 0.14 H281DRAFT_01302 SSU ribosomal protein S6P modification protein 0.47 H281DRAFT_04953 acetyl-coenzyme A synthetase low > 103
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS34085 RimK family alpha-L-glutamate ligase 0.46 QEN71_RS23765 acetate--CoA ligase — —

Not shown: 1 genomes with orthologs for Psyr_0173 only; 49 genomes with orthologs for Psyr_3572 only