| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_4225 | | galactarate dehydratase | 1.0 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.41 | 16 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_4225 | | galactarate dehydratase | 1.00 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_07170 | | galactarate dehydratase | 0.94 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_1107 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.94 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3296 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.94 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_5042 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.93 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.91 | GEMAOFIL_01047 | | Galactarate dehydratase (L-threo-forming) | 0.94 | GEMAOFIL_01819 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 96 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_04210 | | Galactarate dehydratase (EC 4.2.1.42) (from data) | 0.94 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 88 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00145 | | Galactarate dehydratase (L-threo-forming) | 0.94 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS04250 | | galactarate dehydratase | 0.94 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS04250 | | galactarate dehydratase | 0.94 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.91 | QF045_RS07205 | | galactarate dehydratase | 0.94 | QF045_RS11150 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_05290 | | galactarate dehydratase | 0.94 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.88 | GFF1801 | | Galactarate dehydratase (L-threo-forming) | 0.93 | GFF4623 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.84 | Psest_0377 | | galactarate dehydratase | 0.88 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 67 |
| Pseudomonas sp. BP01 | 0.83 | JOY50_RS07425 | garD | galactarate dehydratase | 0.91 | JOY50_RS25800 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 84 |
| Pseudomonas putida KT2440 | 0.83 | PP_3601 | | galactarate dehydratase | 0.92 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | 0.10 | 64 |
| Pseudomonas segetis P6 | 0.73 | MPMX49_04063 | | Galactarate dehydratase (L-threo-forming) | 0.91 | MPMX49_02647 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.47 | 29 |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS15800 | | Galactarate dehydratase (EC 4.2.1.42) (from data) | 0.48 | HSERO_RS07160 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.68 | RR42_RS29090 | | galactarate dehydrogenase | 0.47 | RR42_RS05860 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 128 |
| Variovorax sp. SCN45 | 0.67 | GFF2921 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.47 | GFF4447 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) | low | > 127 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.66 | Xcc-8004.1206.1 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.47 | Xcc-8004.704.1 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) | low | > 74 |
| Variovorax sp. OAS795 | 0.65 | ABID97_RS10325 | | galactarate dehydratase | 0.48 | ABID97_RS06345 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 91 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.65 | H281DRAFT_05320 | | galactarate dehydratase | 0.46 | H281DRAFT_01349 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.65 | ABIE53_006505 | | galactarate dehydratase | 0.47 | ABIE53_003992 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS33575 | | galactarate dehydratase | 0.46 | QEN71_RS26560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 153 |
| Ralstonia solanacearum UW163 | 0.65 | UW163_RS19445 | | galactarate dehydratase | 0.48 | UW163_RS08165 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.65 | RALBFv3_RS19730 | | galactarate dehydratase | 0.48 | RALBFv3_RS05460 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS21090 | | galactarate dehydratase | 0.47 | RS_RS13320 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.65 | BPHYT_RS24160 | | D-galactarate dehydratase | 0.46 | BPHYT_RS23245 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.64 | RPSI07_RS03485 | | galactarate dehydratase | 0.48 | RPSI07_RS11845 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.64 | ABZR87_RS20320 | | galactarate dehydratase | 0.48 | ABZR87_RS01110 | | 3-deoxy-7-phosphoheptulonate synthase AroG | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF1502 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.48 | GFF581 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 90 |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS17975 | | galactarate dehydratase | 0.59 | ECOLIN_RS14705 | | 3-deoxy-7-phosphoheptulonate synthase AroF | — | — |
| Escherichia coli BW25113 | 0.63 | b3128 | garD | (D)-galactarate dehydrogenase (NCBI) | 0.58 | b2601 | aroF | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_16115 | garD | galactarate dehydratase | 0.58 | NIAGMN_18985 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 80 |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_18355 | garD | galactarate dehydratase | 0.58 | OKFHMN_21215 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.61 | 25 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_09795 | garD | galactarate dehydratase | 0.58 | KEDOAH_07005 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | — | — |
| Escherichia coli ECRC101 | 0.63 | MCAODC_08865 | garD | galactarate dehydratase | 0.58 | MCAODC_11745 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.29 | 8 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_21985 | garD | galactarate dehydratase | 0.58 | JDDGAC_24880 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 87 |
| Escherichia coli BL21 | 0.63 | ECD_02993 | | D-galactarate dehydrogenase | 0.59 | ECD_02490 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible | low | > 61 |
| Escherichia fergusonii Becca | 0.62 | EFB2_00691 | | Galactarate dehydratase (L-threo-forming) | 0.59 | EFB2_01291 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 86 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_17190 | garD | galactarate dehydratase | 0.59 | HEPCGN_20335 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 88 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS04070 | | galactarate dehydratase | 0.61 | HER17_RS05375 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_00575 | | Galactarate dehydratase (L-threo-forming) | 0.59 | OHPLBJKB_01107 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 74 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_01395 | garD | galactarate dehydratase | 0.58 | BNILDI_11695 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 75 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_10135 | garD | galactarate dehydratase | 0.59 | NOLOHH_12890 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_3953 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.49 | Ac3H11_4034 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 79 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS17065 | | galactarate dehydratase | 0.59 | DDA3937_RS16140 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS17115 | | galactarate dehydratase | 0.59 | HGI48_RS16260 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS18190 | | galactarate dehydratase | 0.59 | DZA65_RS17355 | | 3-deoxy-7-phosphoheptulonate synthase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF1534 | | D-galactarate dehydratase (EC 4.2.1.42) | 0.59 | GFF4176 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | low | > 78 |
| Rahnella sp. WP5 | 0.62 | EX31_RS07995 | | galactarate dehydratase | 0.59 | EX31_RS07595 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 89 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_04037 | | Galactarate dehydratase (L-threo-forming) | 0.58 | MPMX20_03469 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 85 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_3184 | | galactarate dehydratase | 0.58 | EX28DRAFT_2702 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | low | > 76 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS24840 | | galactarate dehydratase | 0.58 | BWI76_RS21480 | | phospho-2-dehydro-3-deoxyheptonate aldolase | low | > 92 |
| Klebsiella pneumoniae MKP103 | 0.61 | KDGMDA_05710 | | galactarate dehydratase | 0.58 | KDGMDA_02175 | | 3-deoxy-7-phosphoheptulonate synthase AroF | low | > 95 |
| Erwinia tracheiphila SCR3 | 0.61 | LU632_RS06305 | garD | galactarate dehydratase | 0.59 | LU632_RS15450 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.60 | IJEDHG_17330 | garD | galactarate dehydratase | 0.59 | IJEDHG_01270 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 61 |
| Pantoea agglomerans CFBP13505 P0401 | 0.60 | PagCFBP13505_RS16895 | | galactarate dehydratase | 0.59 | PagCFBP13505_RS16565 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 74 |
| Pantoea sp. MT58 | 0.60 | IAI47_04075 | | galactarate dehydratase | 0.59 | IAI47_04400 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 76 |
| Castellaniella sp019104865 MT123 | 0.28 | ABCV34_RS07825 | | altronate dehydratase family protein | 0.44 | ABCV34_RS06825 | | 3-deoxy-7-phosphoheptulonate synthase AroG | — | — |
| Alteromonas macleodii MIT1002 | 0.23 | MIT1002_02430 | | Altronate dehydratase | 0.59 | MIT1002_01314 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | low | > 70 |
| Serratia liquefaciens MT49 | 0.22 | IAI46_22215 | | altronate dehydratase | 0.59 | IAI46_03955 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 87 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_01555 | | altronate dehydratase | 0.46 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_01555 | | altronate dehydratase | 0.46 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | low | > 66 |
Not shown: 20 genomes with orthologs for Psyr_4225 only; 25 genomes with orthologs for Psyr_2073 only