Conservation of cofitness between Psyr_1574 and Psyr_1376 in Pseudomonas syringae pv. syringae B728a

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 1.0 Psyr_1376 DNA mismatch repair protein MutS 0.35 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 1.00 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas sp. RS175 0.81 PFR28_00723 Dipeptidyl aminopeptidase BI 0.92 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_3357 Protease II (EC 3.4.21.83) 0.91 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_04360 peptidase S9 0.92 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2713 Protease II (EC 3.4.21.83) 0.92 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_17950 peptidase S9 0.92 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas simiae WCS417 0.80 PS417_07445 peptidase S9 0.90 PS417_05680 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens SBW25 0.79 PFLU_RS07530 S9 family peptidase 0.90 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS07530 S9 family peptidase 0.90 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas putida KT2440 0.79 PP_4583 putative Peptidase 0.89 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_4484 Protease II (EC 3.4.21.83) 0.90 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Pseudomonas stutzeri RCH2 0.74 Psest_2655 Protease II 0.87 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas sp. S08-1 0.74 OH686_05270 Protease II 0.86 OH686_18195 DNA mismatch repair protein MutS low > 80
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_12915 oligopeptidase B 0.33 CA264_18545 DNA mismatch repair protein MutS low > 74
Serratia liquefaciens MT49 0.37 IAI46_09975 prolyl oligopeptidase family serine peptidase 0.56 IAI46_03800 DNA mismatch repair protein MutS low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2305 Protease II 0.33 Echvi_0960 DNA mismatch repair protein MutS low > 79
Rahnella sp. WP5 0.37 EX31_RS24750 prolyl oligopeptidase family serine peptidase 0.56 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS20860 oligopeptidase B 0.34 CA265_RS08220 DNA mismatch repair protein MutS low > 88
Dickeya dadantii 3937 0.35 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase 0.56 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Enterobacter sp. TBS_079 0.35 MPMX20_02752 Protease 2 0.56 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Dickeya dianthicola 67-19 0.35 HGI48_RS10180 prolyl oligopeptidase family serine peptidase 0.56 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Enterobacter asburiae PDN3 0.35 EX28DRAFT_0709 Protease II 0.56 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Pectobacterium carotovorum WPP14 0.35 HER17_RS11765 prolyl oligopeptidase family serine peptidase 0.56 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola ME23 0.35 DZA65_RS10595 prolyl oligopeptidase family serine peptidase 0.56 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Klebsiella michiganensis M5al 0.34 BWI76_RS18075 oligopeptidase B 0.56 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.842.1 Protease II (EC 3.4.21.83) 0.49 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Escherichia fergusonii Becca 0.34 EFB2_02099 Protease 2 0.56 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli BL21 0.34 ECD_01816 protease II 0.56 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli ECOR27 0.34 NOLOHH_16890 ptrB oligopeptidase B 0.56 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01886 Protease 2 0.56 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Bosea sp. OAE506 0.34 ABIE41_RS22470 S9 family peptidase 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Escherichia coli ECOR38 0.34 HEPCGN_04780 ptrB oligopeptidase B 0.56 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC62 0.34 BNILDI_15685 ptrB oligopeptidase B 0.56 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Pantoea sp. MT58 0.33 IAI47_08515 prolyl oligopeptidase family serine peptidase 0.55 IAI47_04240 DNA mismatch repair protein MutS low > 76
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_2324 Protease II 0.50 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Escherichia coli ECRC99 0.33 KEDOAH_01725 ptrB oligopeptidase B 0.56 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC98 0.33 JDDGAC_00955 ptrB oligopeptidase B 0.56 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli BW25113 0.33 b1845 ptrB protease II (NCBI) 0.56 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECRC102 0.33 NIAGMN_01680 ptrB oligopeptidase B 0.56 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC100 0.33 OKFHMN_26380 ptrB oligopeptidase B 0.56 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC101 0.33 MCAODC_19025 ptrB oligopeptidase B 0.56 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Lysobacter sp. OAE881 0.33 ABIE51_RS03010 S9 family peptidase 0.52 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1842 Protease II 0.32 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Shewanella amazonensis SB2B 0.33 Sama_0144 oligopeptidase B (RefSeq) 0.54 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1624 Protease II (EC 3.4.21.83) 0.56 GFF4773 DNA mismatch repair protein MutS low > 78
Rhizobium sp. OAE497 0.33 ABIE40_RS04845 S9 family peptidase 0.32 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Sinorhizobium meliloti 1021 0.32 SMc00114 protease II oligopeptidase B hydrolase serine protease 0.31 SMc01125 DNA mismatch repair protein MutS low > 103
Caulobacter crescentus NA1000 0.32 CCNA_00985 protease II PtrB 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 66
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00985 protease II PtrB 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 67
Agrobacterium fabrum C58 0.32 Atu0897 protease II 0.32 Atu0345 DNA mismatch repair protein, MutS family low > 89
Alteromonas macleodii MIT1002 0.32 MIT1002_02578 Protease 2 0.57 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Shewanella sp. ANA-3 0.32 Shewana3_0135 oligopeptidase B (RefSeq) 0.57 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.32 SO0144 ptrB protease II (NCBI ptt file) 0.56 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Rhodopseudomonas palustris CGA009 0.31 TX73_008065 S9 family peptidase 0.32 TX73_002655 DNA mismatch repair protein MutS low > 86
Shewanella loihica PV-4 0.31 Shew_0039 oligopeptidase B (RefSeq) 0.55 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS06115 S9 family peptidase 0.28 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_14340 S9 family peptidase 0.57 CSW01_02840 DNA mismatch repair protein MutS low > 62
Bacteroides ovatus ATCC 8483 0.15 BACOVA_00701 peptidase, S9A/B/C family, catalytic domain protein 0.34 BACOVA_02824 DNA mismatch repair protein MutS low > 94
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Rhodanobacter denitrificans FW104-10B01 0.12 LRK54_RS07925 prolyl oligopeptidase family serine peptidase 0.50 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Rhodanobacter denitrificans MT42 0.12 LRK55_RS07655 prolyl oligopeptidase family serine peptidase 0.51 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_14405 Peptidase S9 0.52 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Variovorax sp. SCN45 0.11 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) 0.42 GFF6634 DNA mismatch repair protein MutS low > 127
Variovorax sp. OAS795 0.11 ABID97_RS00165 prolyl oligopeptidase family serine peptidase 0.42 ABID97_RS20815 DNA mismatch repair protein MutS low > 91

Not shown: 0 genomes with orthologs for Psyr_1574 only; 35 genomes with orthologs for Psyr_1376 only