| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_5711 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 1.0 | Pf6N2E2_4484 | | Ferric iron ABC transporter, permease protein | 0.46 | 5 |
| Pseudomonas fluorescens FW300-N2C3 | 0.99 | AO356_19000 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.99 | AO356_13030 | | iron ABC transporter permease | low | > 104 |
| Pseudomonas sp. RS175 | 0.99 | PFR28_03236 | | tRNA-cytidine(32) 2-sulfurtransferase | 0.86 | PFR28_04317 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_02780 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.87 | AO353_08740 | | iron ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_3491 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.87 | Pf1N1B4_2233 | | Ferric iron ABC transporter, permease protein | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.96 | PfGW456L13_2020 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.82 | PfGW456L13_901 | | Ferric iron ABC transporter, permease protein | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.95 | Psyr_3705 | | conserved hypothetical protein | 0.80 | Psyr_0245 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.95 | Psyr_3705 | | conserved hypothetical protein | 0.80 | Psyr_0245 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas sp. DMC3 | 0.95 | GFF4833 | | tRNA-cytidine(32) 2-sulfurtransferase | 0.86 | GFF311 | | hypothetical protein | low | > 89 |
| Pseudomonas simiae WCS417 | 0.95 | PS417_16415 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.83 | PS417_27260 | | iron ABC transporter permease | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.95 | COO64_RS07395 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | 0.80 | COO64_RS00965 | | iron ABC transporter permease | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.95 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.85 | PFLU_RS28920 | | iron ABC transporter permease | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.95 | PFLU_RS18455 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.85 | PFLU_RS28920 | | iron ABC transporter permease | low | > 109 |
| Pseudomonas sp. BP01 | 0.93 | JOY50_RS23840 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | 0.79 | JOY50_RS22420 | | ABC transporter permease | low | > 84 |
| Pseudomonas putida KT2440 | 0.92 | PP_1641 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.76 | PP_5195 | | putative Iron ABC transporter, permease protein | low | > 96 |
| Pseudomonas aeruginosa PA14 | 0.91 | IKLFDK_05600 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.70 | IKLFDK_27390 | | iron ABC transporter permease | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.90 | Psest_3033 | | Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | 0.73 | Psest_0180 | | ABC-type Fe3+ transport system, permease component | — | — |
| Pseudomonas sp. S08-1 | 0.89 | OH686_05145 | | tRNA-(cytosine32)-2-thiocytidine synthetase TtcA | 0.80 | OH686_11180 | | Ferric iron ABC transporter, permease protein | low | > 80 |
| Shewanella amazonensis SB2B | 0.73 | Sama_1801 | | hypothetical protein (RefSeq) | 0.32 | Sama_0667 | | iron(III) ABC transporter, permease protein (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.72 | SO2354 | | conserved hypothetical protein (NCBI ptt file) | 0.37 | SO0743 | | iron(III) ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_02139 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.16 | MIT1002_00116 | | Spermidine/putrescine transport system permease protein PotB | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_2154 | | tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) | 0.43 | B158DRAFT_0541 | | ABC-type Fe3+ transport system, permease component | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_07180 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.34 | CSW01_03210 | | iron ABC transporter permease | 0.55 | 39 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS12410 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.17 | HGI48_RS16120 | | iron ABC transporter permease | low | > 71 |
| Dickeya dadantii 3937 | 0.70 | DDA3937_RS12330 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.18 | DDA3937_RS16000 | | iron ABC transporter permease | low | > 74 |
| Dickeya dianthicola ME23 | 0.70 | DZA65_RS12850 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.17 | DZA65_RS17205 | | iron ABC transporter permease | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.70 | LU632_RS12165 | ttcA | tRNA 2-thiocytidine(32) synthetase TtcA | 0.10 | LU632_RS03340 | | iron ABC transporter permease | low | > 74 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_2116 | | PP-loop domain protein | 0.36 | HP15_3841 | | iron(III) ABC transporter permease protein | low | > 73 |
| Shewanella loihica PV-4 | 0.69 | Shew_1995 | | PP-loop domain-containing protein (RefSeq) | 0.32 | Shew_0862 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 60 |
| Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS09605 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.26 | HER17_RS14370 | | iron ABC transporter permease | low | > 75 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS12710 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.12 | BWI76_RS10475 | | binding-protein-dependent transport system inner membrane protein | low | > 92 |
| Serratia liquefaciens MT49 | 0.69 | IAI46_13420 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.11 | IAI46_13020 | | iron ABC transporter permease | low | > 86 |
| Enterobacter sp. TBS_079 | 0.69 | MPMX20_02440 | | tRNA-cytidine(32) 2-sulfurtransferase | 0.13 | MPMX20_01120 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.69 | EX28DRAFT_1007 | | Predicted ATPase of the PP-loop superfamily implicated in cell cycle control | 0.13 | EX28DRAFT_2436 | | ABC-type Fe3+ transport system, permease component | low | > 76 |
| Rahnella sp. WP5 | 0.67 | EX31_RS06375 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.27 | EX31_RS17575 | | iron ABC transporter permease | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_1817 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.29 | Ac3H11_3971 | | Ferric iron ABC transporter, permease protein | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.66 | RR42_RS01445 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.35 | RR42_RS04345 | | iron ABC transporter permease | low | > 128 |
| Variovorax sp. SCN45 | 0.65 | GFF7310 | | tRNA-(cytosine32)-2-thiocytidine synthetase TtcA | 0.26 | GFF6761 | | Ferric iron ABC transporter, permease protein | low | > 127 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS06505 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.28 | ABID97_RS21260 | | iron ABC transporter permease | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS22035 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.26 | HSERO_RS16585 | | iron ABC transporter permease | low | > 78 |
| Dechlorosoma suillum PS | 0.63 | Dsui_0695 | | putative ATPase of the PP-loop superfamily implicated in cell cycle control | 0.35 | Dsui_2942 | | ABC-type Fe3+ transport system, permease component | low | > 51 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF1658 | | tRNA(Cytosine32)-2-thiocytidine synthetase | 0.27 | GFF663 | | Ferric iron ABC transporter, permease protein | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS10450 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.28 | ABCV34_RS03550 | | iron ABC transporter permease | — | — |
| Rhizobium sp. OAE497 | 0.48 | ABIE40_RS10230 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.30 | ABIE40_RS21705 | | iron ABC transporter permease | low | > 107 |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_c02110 | | tRNA 2-thiocytidine biosynthesis protein TtcA | 0.34 | PGA1_c32540 | | putative Fe(3+)-transport system protein SfuB | low | > 62 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc00534 | | C32 tRNA thiolase | 0.31 | SMc00775 | | iron(III) permease | low | > 103 |
| Dinoroseobacter shibae DFL-12 | 0.47 | Dshi_0330 | | PP-loop domain protein (RefSeq) | 0.34 | Dshi_2023 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.47 | Atu1858 | | hypothetical protein | 0.31 | Atu0408 | | ABC transporter, membrane spanning protein | low | > 89 |
| Fusobacterium nucleatum SB010 | 0.27 | HUW76_05920 | | tRNA 2-thiocytidine(32) synthetase TtcA | 0.11 | HUW76_03170 | | iron ABC transporter permease | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.19 | DvMF_2293 | | PP-loop domain protein (RefSeq) | 0.11 | DvMF_1588 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 51 |
Not shown: 37 genomes with orthologs for Pf6N2E2_5711 only; 12 genomes with orthologs for Pf6N2E2_4484 only