| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2E2 | 1.0 | Pf6N2E2_5159 | | glutamyl-Q-tRNA synthetase | 1.0 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | 0.34 | 4 |
| Pseudomonas fluorescens FW300-N2C3 | 0.98 | AO356_16090 | | glutamyl-Q tRNA(Asp) ligase | 0.92 | AO356_04875 | | antibiotic transporter | low | > 104 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_03715 | | Glutamyl-Q tRNA(Asp) synthetase | 0.91 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_2861 | | glutamyl-Q-tRNA synthetase | 0.86 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.88 | AO353_14415 | | glutamyl-Q tRNA(Asp) ligase | 0.84 | AO353_17300 | | antibiotic transporter | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.87 | PfGW456L13_1527 | | glutamyl-Q-tRNA synthetase | 0.84 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | low | > 87 |
| Pseudomonas simiae WCS417 | 0.85 | PS417_23880 | | glutamyl-Q tRNA(Asp) ligase | 0.80 | PS417_06775 | | antibiotic transporter | 0.25 | 26 |
| Pseudomonas fluorescens SBW25-INTG | 0.85 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.80 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.85 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.80 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.67 | 100 |
| Pseudomonas sp. S08-1 | 0.83 | OH686_17275 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.68 | OH686_16045 | | Multidrug efflux system, membrane fusion component | low | > 80 |
| Pseudomonas syringae pv. syringae B728a | 0.78 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | 0.81 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.78 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | 0.81 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.78 | Psest_1002 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.67 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.24 | 64 |
| Pseudomonas putida KT2440 | 0.74 | PP_4694 | | Glutamyl-Q tRNA(Asp) synthetase | 0.76 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | low | > 96 |
| Escherichia coli BW25113 | 0.48 | b0144 | yadB | glutamyl-Q tRNA(Asp) synthetase (RefSeq) | 0.52 | b0463 | acrA | multidrug efflux system (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.48 | NOLOHH_02695 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_03518 | | Glutamyl-Q tRNA(Asp) synthetase | 0.52 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | low | > 73 |
| Escherichia coli BL21 | 0.48 | ECD_00143 | | glutamyl-Q tRNA(Asp) synthetase | 0.52 | ECD_00414 | | multidrug efflux system | low | > 61 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_08975 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 75 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_08300 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 87 |
| Escherichia fergusonii Becca | 0.47 | EFB2_03900 | | Glutamyl-Q tRNA(Asp) synthetase | 0.52 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS00795 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_13945 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 86 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_00865 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 87 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_08200 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_10350 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 80 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_17805 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.47 | GFF88 | | glutamyl-Q-tRNA synthetase | 0.51 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | low | > 78 |
| Serratia liquefaciens MT49 | 0.46 | IAI46_21215 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | low | > 86 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_00830 | | Glutamyl-Q tRNA(Asp) synthetase | 0.52 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | low | > 85 |
| Dickeya dianthicola 67-19 | 0.46 | HGI48_RS16055 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.49 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | low | > 71 |
| Rahnella sp. WP5 | 0.45 | EX31_RS03255 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | low | > 89 |
| Dickeya dianthicola ME23 | 0.45 | DZA65_RS17140 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.49 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS05575 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.50 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_3733 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.51 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Dyella japonica UNC79MFTsu3.2 | 0.44 | ABZR86_RS00575 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.47 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS20085 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_0057 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.32 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | low | > 40 |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS15940 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.50 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS05010 | | tRNA glutamyl-Q synthetase | 0.53 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 92 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.2261.1 | | glutamyl-Q-tRNA synthetase | 0.48 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | low | > 74 |
| Pantoea sp. MT58 | 0.43 | IAI47_15640 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.52 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS13520 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | low | > 62 |
| Shewanella oneidensis MR-1 | 0.42 | SO0873 | | glutamyl-tRNA synthetase domain protein (NCBI ptt file) | 0.43 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0779 | | glutamyl-tRNA synthetase domain-containing protein (RefSeq) | 0.45 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | low | > 62 |
| Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS24480 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.48 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.46 | 16 |
| Rhodanobacter sp. FW510-T8 | 0.41 | OKGIIK_03640 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | low | > 52 |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_001439 | | glutamyl-Q tRNA(Asp) synthetase | 0.46 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_00309 | | glutamyl-Q tRNA(Asp) synthetase | 0.45 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS06160 | | glutamyl-Q tRNA(Asp) ligase | 0.46 | BPHYT_RS16175 | | hemolysin D | low | > 109 |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_03691 | | Glutamyl-Q tRNA(Asp) synthetase | 0.36 | MIT1002_00134 | | Acriflavine resistance protein A precursor | low | > 70 |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS10025 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.48 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS03645 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.48 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS14805 | | glutamyl-Q tRNA(Asp) ligase | 0.47 | RR42_RS32415 | | hemolysin D | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS13585 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.47 | RPSI07_RS03395 | | efflux RND transporter periplasmic adaptor subunit | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS11090 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.48 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Variovorax sp. SCN45 | 0.35 | GFF592 | | Glutamyl-Q tRNA(Asp) synthetase | 0.44 | GFF2442 | | RND efflux system, membrane fusion protein | low | > 127 |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A3734 | | Glutamyl-tRNA synthetase, class Ic (NCBI) | 0.42 | Rru_A2050 | | Secretion protein HlyD (NCBI) | low | > 58 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_1474 | | glutamyl-tRNA synthetase class Ic (RefSeq) | 0.09 | Dshi_1163 | | efflux transporter, RND family, MFP subunit (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.23 | TX73_024705 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.41 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | low | > 86 |
| Rhizobium sp. OAE497 | 0.20 | ABIE40_RS17470 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.43 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | low | > 107 |
Not shown: 22 genomes with orthologs for Pf6N2E2_5159 only; 6 genomes with orthologs for Pf6N2E2_2823 only