Conservation of cofitness between Pf1N1B4_2147 and Pf1N1B4_1315 in Pseudomonas fluorescens FW300-N1B4

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2147 Putrescine utilization regulator 1.0 Pf1N1B4_1315 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 0.28 15
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29365 cupin domain-containing protein 0.98 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH low > 109
Pseudomonas simiae WCS417 0.99 PS417_27690 XRE family transcriptional regulator 0.97 PS417_02940 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29365 cupin domain-containing protein 0.98 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH — —
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_09140 XRE family transcriptional regulator 0.99 AO353_13650 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4394 Putrescine utilization regulator 0.99 Pf6N2E2_3519 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_12635 XRE family transcriptional regulator 0.98 AO356_08225 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_815 Putrescine utilization regulator 0.98 PfGW456L13_57 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Pseudomonas sp. RS175 0.97 PFR28_04396 HTH-type transcriptional regulator PuuR 0.98 PFR28_05214 Bifunctional purine biosynthesis protein PurH — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0238 Helix-turn-helix motif protein 0.94 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0238 Helix-turn-helix motif protein 0.94 Psyr_4406 IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas putida KT2440 0.89 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine 0.91 PP_4822 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pseudomonas sp. S08-1 0.83 OH686_13700 Putrescine utilization regulator 0.89 OH686_07620 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pseudomonas stutzeri RCH2 0.83 Psest_3791 Predicted transcriptional regulators 0.87 Psest_1014 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Shewanella oneidensis MR-1 0.71 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.65 SO0442 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_0970 XRE family transcriptional regulator (RefSeq) 0.67 Shew_3412 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.70 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.66 Sama_0395 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) 0.54 52
Shewanella sp. ANA-3 0.70 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.66 Shewana3_0441 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 73
Rhodospirillum rubrum S1H 0.53 Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) 0.47 Rru_A3655 Phosphoribosylaminoimidazolecarboxamideformyltransferase (NCBI) — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS23170 XRE family transcriptional regulator 0.57 BPHYT_RS16595 bifunctional purine biosynthesis protein PurH — —
Sinorhizobium meliloti 1021 0.48 SMc04387 aldehyde dehydrogenase 0.48 SMc04088 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 103
Azospirillum sp. SherDot2 0.48 MPMX19_04921 HTH-type transcriptional regulator PuuR 0.51 MPMX19_02325 Bifunctional purine biosynthesis protein PurH — —
Bosea sp. OAE506 0.47 ABIE41_RS05345 cupin domain-containing protein 0.48 ABIE41_RS05095 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 77
Agrobacterium fabrum C58 0.47 Atu3328 aldehyde dehydrogenase 0.47 Atu2823 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pantoea sp. MT58 0.41 IAI47_07115 HTH-type transcriptional regulator PuuR 0.67 IAI47_18040 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 76
Escherichia coli ECOR27 0.37 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.69 NOLOHH_05455 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.69 OHPLBJKB_04043 Bifunctional purine biosynthesis protein PurH low > 73
Escherichia coli BW25113 0.37 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.69 b4006 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) low > 76
Serratia liquefaciens MT49 0.37 IAI46_17165 HTH-type transcriptional regulator PuuR 0.68 IAI46_01365 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 86
Escherichia coli ECRC99 0.37 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.69 KEDOAH_14850 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECOR38 0.37 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.69 HEPCGN_11950 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 87
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1500 Predicted transcriptional regulators 0.69 EX28DRAFT_4545 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) — —
Escherichia coli BL21 0.37 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.69 ECD_03883 IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase low > 61
Escherichia coli ECRC62 0.37 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.69 BNILDI_06065 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 0.56 44
Escherichia coli ECRC101 0.37 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.69 MCAODC_03810 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 87
Escherichia coli ECRC100 0.37 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.69 OKFHMN_13310 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 80
Escherichia coli ECRC98 0.37 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.69 JDDGAC_16935 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 86
Rahnella sp. WP5 0.37 EX31_RS17905 HTH-type transcriptional regulator PuuR 0.68 EX31_RS16860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 89
Escherichia coli ECRC102 0.37 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.69 NIAGMN_11060 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Klebsiella michiganensis M5al 0.37 BWI76_RS10700 XRE family transcriptional regulator 0.68 BWI76_RS01615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.18 43
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS00225 XRE family transcriptional regulator 0.57 RR42_RS02720 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Fusobacterium nucleatum SB010 0.22 HUW76_07320 helix-turn-helix domain-containing protein 0.41 HUW76_05195 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 35
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1308 Transcriptional regulator 0.54 Ac3H11_3994 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Phocaeicola dorei CL03T12C01 0.19 ABI39_RS13885 helix-turn-helix transcriptional regulator 0.33 ABI39_RS09195 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 72
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS17685 helix-turn-helix transcriptional regulator 0.33 HMPREF1058_RS13605 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2783 transcriptional regulator (NCBI ptt file) 0.33 BT3812 phosphoribosylaminoimidazole carboxy formyl formyltransferase; inosine-monophosphate cyclohydrolase; bifunctional purine biosynthesis protein purH (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.19 BACOVA_01081 hypothetical protein 0.33 BACOVA_03657 putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 94
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor 0.58 H281DRAFT_04251 IMP cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Bacteroides stercoris CC31F 0.18 HMPREF1181_RS01200 helix-turn-helix transcriptional regulator 0.34 HMPREF1181_RS00165 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 56
Ralstonia solanacearum PSI07 0.18 RPSI07_RS22920 helix-turn-helix domain-containing protein 0.56 RPSI07_RS21530 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH — —
Paraburkholderia graminis OAS925 0.18 ABIE53_004168 transcriptional regulator with XRE-family HTH domain 0.58 ABIE53_003491 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Phaeobacter inhibens DSM 17395 0.18 PGA1_c28440 putative transcriptional regulator 0.49 PGA1_c32860 bifunctional purine biosynthesis protein PurH — —
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS17570 XRE family transcriptional regulator 0.32 HMPREF1078_RS16130 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 61
Variovorax sp. OAS795 0.16 ABID97_RS13245 XRE family transcriptional regulator 0.54 ABID97_RS24725 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Castellaniella sp019104865 MT123 0.14 ABCV34_RS09100 XRE family transcriptional regulator 0.52 ABCV34_RS07970 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —

Not shown: 2 genomes with orthologs for Pf1N1B4_2147 only; 45 genomes with orthologs for Pf1N1B4_1315 only