Conservation of cofitness between PP_0846 and PP_4880 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0846 DnaK-like molecular chaperone specific for IscU 1.0 PP_4880 exoribonuclease R 0.35 1
Pseudomonas simiae WCS417 0.88 PS417_23180 chaperone protein HscA 0.81 PS417_02555 exoribonuclease R — —
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_861 Chaperone protein HscA 0.82 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_06625 chaperone protein HscA 0.82 AO356_08610 exoribonuclease R — —
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_4869 Chaperone protein HscA 0.83 PfGW456L13_144 3'-to-5' exoribonuclease RNase R — —
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_15855 chaperone protein HscA 0.83 AO353_13200 exoribonuclease R — —
Pseudomonas fluorescens SBW25 0.88 PFLU_RS24835 Fe-S protein assembly chaperone HscA 0.81 PFLU_RS02625 ribonuclease R — —
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS24835 Fe-S protein assembly chaperone HscA 0.81 PFLU_RS02625 ribonuclease R — —
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3185 Chaperone protein HscA 0.82 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R — —
Pseudomonas sp. RS175 0.88 PFR28_00290 Chaperone protein HscA 0.83 PFR28_05130 Ribonuclease R — —
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_1241 Fe-S protein assembly chaperone HscA 0.81 Psyr_0579 RNAse R — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_1241 Fe-S protein assembly chaperone HscA 0.81 Psyr_0579 RNAse R — —
Pseudomonas sp. S08-1 0.82 OH686_17495 Fe-S protein assembly chaperone HscA 0.78 OH686_15910 ribonuclease R — —
Pseudomonas stutzeri RCH2 0.79 Psest_1255 Fe-S protein assembly chaperone HscA 0.75 Psest_0691 ribonuclease R — —
Serratia liquefaciens MT49 0.63 IAI46_19335 Fe-S protein assembly chaperone HscA 0.45 IAI46_01660 ribonuclease R low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2431 Chaperone protein HscA 0.45 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 low > 78
Dickeya dadantii 3937 0.62 DDA3937_RS15525 Fe-S protein assembly chaperone HscA 0.45 DDA3937_RS17260 ribonuclease R — —
Ralstonia solanacearum UW163 0.62 UW163_RS11755 Fe-S protein assembly chaperone HscA 0.41 UW163_RS12810 ribonuclease R — —
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS14290 Fe-S protein assembly chaperone HscA 0.41 RALBFv3_RS15345 ribonuclease R — —
Dickeya dianthicola 67-19 0.62 HGI48_RS15625 Fe-S protein assembly chaperone HscA 0.45 HGI48_RS17315 ribonuclease R — —
Ralstonia solanacearum PSI07 0.62 RPSI07_RS19175 Fe-S protein assembly chaperone HscA 0.42 RPSI07_RS18030 ribonuclease R — —
Ralstonia solanacearum GMI1000 0.62 RS_RS05070 molecular chaperone HscA 0.42 RS_RS06155 ribonuclease R — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_03905 chaperone protein HscA 0.45 CSW01_13155 ribonuclease R — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS14345 Fe-S protein assembly chaperone HscA 0.45 ECOLIN_RS24265 ribonuclease R low > 52
Dickeya dianthicola ME23 0.61 DZA65_RS16700 Fe-S protein assembly chaperone HscA 0.45 DZA65_RS18405 ribonuclease R — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01183 Chaperone protein HscA 0.45 OHPLBJKB_03863 Ribonuclease R — —
Escherichia coli ECRC101 0.61 MCAODC_12170 hscA Fe-S protein assembly chaperone HscA 0.45 MCAODC_02735 rnr ribonuclease R — —
Escherichia coli ECOR27 0.61 NOLOHH_13310 hscA Fe-S protein assembly chaperone HscA 0.45 NOLOHH_04485 rnr ribonuclease R — —
Escherichia coli BW25113 0.61 b2526 hscA chaperone protein HscA (NCBI) 0.45 b4179 vacB putative enzyme (VIMSS) — —
Escherichia coli ECRC98 0.61 JDDGAC_25315 hscA Fe-S protein assembly chaperone HscA 0.45 JDDGAC_15860 rnr ribonuclease R — —
Escherichia coli ECRC62 0.61 BNILDI_12110 hscA Fe-S protein assembly chaperone HscA 0.45 BNILDI_07005 rnr ribonuclease R — —
Escherichia coli ECRC102 0.61 NIAGMN_19410 hscA Fe-S protein assembly chaperone HscA 0.45 NIAGMN_10070 rnr ribonuclease R — —
Escherichia coli ECRC99 0.61 KEDOAH_06580 hscA Fe-S protein assembly chaperone HscA 0.45 KEDOAH_15935 rnr ribonuclease R — —
Escherichia coli ECRC101 0.61 OKFHMN_21640 hscA Fe-S protein assembly chaperone HscA 0.45 OKFHMN_12220 rnr ribonuclease R — —
Escherichia coli BL21 0.61 ECD_02418 DnaK-like molecular chaperone specific for IscU 0.45 ECD_04046 exoribonuclease R, RNase R — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS10005 Fe-S protein assembly chaperone HscA 0.41 ABZR87_RS10985 ribonuclease R — —
Escherichia coli ECOR38 0.61 HEPCGN_20780 hscA Fe-S protein assembly chaperone HscA 0.45 HEPCGN_10450 rnr ribonuclease R — —
Escherichia fergusonii Becca 0.61 EFB2_01364 Chaperone protein HscA 0.45 EFB2_04356 Ribonuclease R low > 86
Klebsiella michiganensis M5al 0.61 BWI76_RS21140 molecular chaperone HscA 0.45 BWI76_RS02575 exoribonuclease R low > 92
Pectobacterium carotovorum WPP14 0.60 HER17_RS06035 Fe-S protein assembly chaperone HscA 0.45 HER17_RS03835 ribonuclease R 0.55 29
Enterobacter sp. TBS_079 0.60 MPMX20_03407 Chaperone protein HscA 0.45 MPMX20_00460 Ribonuclease R low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0114 Fe-S protein assembly chaperone HscA 0.45 EX28DRAFT_3376 ribonuclease R — —
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS12760 molecular chaperone HscA 0.41 BPHYT_RS08455 ribonuclease R — —
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS05805 Fe-S protein assembly chaperone HscA 0.41 QEN71_RS22925 ribonuclease R — —
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS06050 molecular chaperone HscA 0.43 RR42_RS13065 ribonuclease R — —
Shewanella sp. ANA-3 0.59 Shewana3_2276 hscA chaperone protein HscA (RefSeq) 0.45 Shewana3_0697 RNAse R (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_00482 molecular chaperone HscA 0.41 H281DRAFT_00712 RNAse R — —
Paraburkholderia graminis OAS925 0.59 ABIE53_002777 molecular chaperone HscA 0.41 ABIE53_001940 ribonuclease R — —
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_1463 Fe-S protein assembly chaperone HscA 0.45 B158DRAFT_1989 ribonuclease R low > 40
Shewanella oneidensis MR-1 0.58 SO2268 hscA chaperone protein HscA (NCBI ptt file) 0.44 SO3935 vacB ribonuclease R (NCBI ptt file) 0.38 22
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4108 Chaperone protein HscA 0.38 Ac3H11_412 3'-to-5' exoribonuclease RNase R — —
Shewanella amazonensis SB2B 0.58 Sama_1297 hscA chaperone protein HscA (RefSeq) 0.43 Sama_3067 exoribonuclease II (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS15745 molecular chaperone HscA 0.41 HSERO_RS09290 ribonuclease R — —
Dechlorosoma suillum PS 0.58 Dsui_2375 Fe-S protein assembly chaperone HscA 0.44 Dsui_3128 ribonuclease R — —
Shewanella loihica PV-4 0.57 Shew_2313 hscA chaperone protein HscA (RefSeq) 0.45 Shew_3289 ribonuclease R (RefSeq) — —
Variovorax sp. SCN45 0.57 GFF951 Chaperone protein HscA 0.37 GFF399 3'-to-5' exoribonuclease RNase R — —
Variovorax sp. OAS795 0.56 ABID97_RS14025 Fe-S protein assembly chaperone HscA 0.38 ABID97_RS17200 ribonuclease R — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4956 Chaperone protein HscA 0.35 GFF4921 3'-to-5' exoribonuclease RNase R — —
Acinetobacter radioresistens SK82 0.51 MPMX26_01323 Chaperone protein HscA 0.35 MPMX26_02684 Ribonuclease R — —
Magnetospirillum magneticum AMB-1 0.47 AMB_RS15235 Fe-S protein assembly chaperone HscA 0.23 AMB_RS04465 ribonuclease R — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_19505 Fe-S protein assembly chaperone HscA 0.21 CA264_17355 ribonuclease R — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS03365 molecular chaperone DnaK 0.20 CA265_RS10530 ribonuclease R — —

Not shown: 1 genomes with orthologs for PP_0846 only; 30 genomes with orthologs for PP_4880 only