| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4694 | | Glutamyl-Q tRNA(Asp) synthetase | 1.0 | PP_4099 | | two-componenent system BarA/UvrY - regulatory subunit | 0.36 | 4 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_17275 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.88 | OH686_00335 | | BarA-associated response regulator UvrY ( GacA SirA) | low | > 80 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_5159 | | glutamyl-Q-tRNA synthetase | 0.84 | Pf6N2E2_2022 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_16090 | | glutamyl-Q tRNA(Asp) ligase | 0.84 | AO356_00355 | | chemotaxis protein CheY | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_1527 | | glutamyl-Q-tRNA synthetase | 0.84 | PfGW456L13_2885 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.71 | PS417_23880 | | glutamyl-Q tRNA(Asp) ligase | 0.89 | PS417_10720 | | chemotaxis protein CheY | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.70 | Pf1N1B4_2861 | | glutamyl-Q-tRNA synthetase | 0.84 | Pf1N1B4_5619 | | BarA-associated response regulator UvrY (= GacA = SirA) | 0.41 | 17 |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.90 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS25720 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.90 | PFLU_RS10765 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_14415 | | glutamyl-Q tRNA(Asp) ligase | 0.84 | AO353_21830 | | chemotaxis protein CheY | low | > 101 |
| Pseudomonas sp. RS175 | 0.69 | PFR28_03715 | | Glutamyl-Q tRNA(Asp) synthetase | 0.93 | PFR28_01410 | | Response regulator GacA | 0.23 | 10 |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | 0.92 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_0834 | | Glutamyl-tRNA synthetase, class Ic | 0.92 | Psyr_2897 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Pseudomonas stutzeri RCH2 | 0.67 | Psest_1002 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.88 | Psest_2260 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | low | > 67 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_03518 | | Glutamyl-Q tRNA(Asp) synthetase | 0.61 | OHPLBJKB_01815 | | Response regulator UvrY | low | > 73 |
| Escherichia coli BW25113 | 0.48 | b0144 | yadB | glutamyl-Q tRNA(Asp) synthetase (RefSeq) | 0.61 | b1914 | uvrY | response regulator (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.48 | NOLOHH_02695 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_08975 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_17805 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | KEDOAH_02270 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_13945 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | JDDGAC_00410 | uvrC | excinuclease ABC subunit UvrC | low | > 86 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_10350 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | OKFHMN_25820 | uvrC | excinuclease ABC subunit UvrC | low | > 80 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_00865 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | MCAODC_19570 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_08200 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | NIAGMN_02230 | uvrC | excinuclease ABC subunit UvrC | — | — |
| Escherichia fergusonii Becca | 0.47 | EFB2_03900 | | Glutamyl-Q tRNA(Asp) synthetase | 0.61 | EFB2_02032 | | Response regulator UvrY | low | > 86 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_08300 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | HEPCGN_04175 | uvrC | excinuclease ABC subunit UvrC | low | > 87 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS00795 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.61 | ECOLIN_RS10900 | | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF88 | | glutamyl-Q-tRNA synthetase | 0.60 | GFF1699 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_00830 | | Glutamyl-Q tRNA(Asp) synthetase | 0.60 | MPMX20_02839 | | Response regulator UvrY | low | > 85 |
| Klebsiella michiganensis M5al | 0.45 | BWI76_RS05010 | | tRNA glutamyl-Q synthetase | 0.59 | BWI76_RS18335 | | DNA-binding response regulator | low | > 92 |
| Serratia liquefaciens MT49 | 0.45 | IAI46_21215 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.60 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 86 |
| Rahnella sp. WP5 | 0.44 | EX31_RS03255 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.61 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 89 |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_3733 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.60 | EX28DRAFT_0633 | | two component transcriptional regulator, LuxR family | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS05575 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.59 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 75 |
| Kangiella aquimarina DSM 16071 | 0.42 | B158DRAFT_0057 | | glutamyl-queuosine tRNA(Asp) synthetase | 0.61 | B158DRAFT_1272 | | two component transcriptional regulator, LuxR family | low | > 40 |
| Erwinia tracheiphila SCR3 | 0.42 | LU632_RS20085 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.62 | LU632_RS10190 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | — | — |
| Pantoea sp. MT58 | 0.42 | IAI47_15640 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.62 | IAI47_12470 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 76 |
| Shewanella oneidensis MR-1 | 0.42 | SO0873 | | glutamyl-tRNA synthetase domain protein (NCBI ptt file) | 0.60 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | 0.25 | 66 |
| Shewanella amazonensis SB2B | 0.42 | Sama_0779 | | glutamyl-tRNA synthetase domain-containing protein (RefSeq) | 0.58 | Sama_1607 | | response regulator (RefSeq) | low | > 62 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS16055 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.59 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 71 |
| Acinetobacter radioresistens SK82 | 0.41 | MPMX26_00176 | | Glutamyl-Q tRNA(Asp) synthetase | 0.58 | MPMX26_00164 | | Response regulator GacA | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.41 | Xcc-8004.2261.1 | | glutamyl-Q-tRNA synthetase | 0.44 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | low | > 74 |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS13520 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.46 | ABIE51_RS11810 | | response regulator | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS00575 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.44 | ABZR86_RS02715 | | response regulator | low | > 74 |
| Dickeya dianthicola ME23 | 0.41 | DZA65_RS17140 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.59 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | 0.37 | 37 |
| Shewanella sp. ANA-3 | 0.41 | Shewana3_3405 | | glutamyl-tRNA synthetase, class Ic (RefSeq) | 0.61 | Shewana3_1608 | | response regulator (RefSeq) | low | > 73 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS15940 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.59 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | low | > 74 |
| Shewanella loihica PV-4 | 0.40 | Shew_3130 | | glutamate--tRNA ligase (RefSeq) | 0.59 | Shew_1824 | | response regulator (RefSeq) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_03640 | gluQRS | tRNA glutamyl-Q(34) synthetase GluQRS | 0.46 | OKGIIK_07415 | | DNA-binding response regulator | low | > 52 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_03150 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.66 | CSW01_06135 | | two-component system response regulator UvrY | — | — |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_03691 | | Glutamyl-Q tRNA(Asp) synthetase | 0.50 | MIT1002_02154 | | Response regulator UvrY | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS14820 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.41 | LRK54_RS17520 | | response regulator | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS14535 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.46 | LRK55_RS17740 | | response regulator | low | > 63 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS17850 | | glutamyl-Q tRNA(Asp) ligase | 0.35 | HSERO_RS06015 | | hisitidine kinase | low | > 78 |
| Marinobacter adhaerens HP15 | 0.37 | HP15_331 | | glutamyl-Q tRNA(Asp) synthetase | 0.67 | HP15_1567 | | two component transcriptional regulator, LuxR family | low | > 73 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS18025 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.35 | ABID97_RS12700 | | response regulator transcription factor | low | > 91 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU1693 | gltX-1 | glutamyl-tRNA synthetase (TIGR) | 0.31 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | low | > 55 |
| Bifidobacterium breve UCC2003 | 0.27 | BBR_RS19695 | | tRNA glutamyl-Q(34) synthetase GluQRS | 0.24 | BBR_RS15990 | | DNA-binding response regulator | low | > 34 |